Oryctolagus cuniculus (rabbit): 100351604
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Entry
100351604 CDS
T03373
Name
(RefSeq) contactin-associated protein 1 isoform X1
KO
K07379
contactin associated protein 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100351604
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocu04990
]
100351604
Domain-containing proteins not elsewhere classified [BR:
ocu04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
100351604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
EGF
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
100351604
NCBI-ProteinID:
XP_017204697
Ensembl:
ENSOCUG00000007327
LinkDB
All DBs
Position
19:40938401..40951357
Genome browser
AA seq
1381 aa
AA seq
DB search
MHLGLLCVLAAAVSGVQGWGYYGCDEELVGPLYARSLGASSYYGLFTAPRFARLHGISGW
SPRIGDPNPWLQIDLMKKHRIRAVATQGSFNSWDWVTRYMLLYGDRVDSWTPFYQRGHNA
TFFGNVNESAVVRHDLHYHFTARYIRIVPLAWNPRGKIGLRLGLYGCPYKADVLYFDGDD
AISYRFPRGVSRSLWDVFAFSFKTEEKDGLLLHAEGAQGDYVTLELQGAHLLLHMSLGSS
PIQPRPGHTTVSAGGVLNDQHWHYVRLDRFGRDANLTLDGYVQRFVLNGDFEMLNLDTEM
FVGGLVGAAQKNLAYRHNFRGCMENVIFNRVNIADLAVRRHSRITFEGKVAFRCLDPVPH
PINFGGPHNFVQVPGFPRRGRLAVSFRFRTWDLTGLLLFSRLGDGLGHVELMLSEGQVNV
SVAQPGRKKLQFAAGYRLNDGFWHEVNFVAQENHAVISIDDVEGAEVRVSYPLLIRTGTS
YFFGGCPKPAGRWGCHSNQTAFHGCMELLKVDGQLVNLTLVEFRRLGYYAEVLFDTCGIT
DRCHPNMCEHDGRCYQSWDDFICYCELTGYKGETCHQPLYKESCEAYRLSGKTSGNFTID
PDGSGPLKPFVVYCDIRENRAWTVVRHDRLWTTRVTGSSMERPFLGAVQYWNASWEEVSA
LANASQHCEQWIEFSCYNSRLLNTGGGYPYSFWIGRNEEQHFYWGGSQPGIQRCACGLDR
SCVDPALHCNCDADQPQWRTDKGLLTFVDHLPVTQVVVGDTNRSTSEAQFFLRPLRCYGD
RNSWNTISFHTGAALRFPPIRANHSLDVSFYFRTSAPSGVFLENMGGPYCQWRRPYVRLE
LNTSRDVVFAFDVGNGDENLTVHSDDFEFDDDEWHLVRAEINVKQARLRVDHRPWVLRPM
PPQTYIWLEYDQPLYVGSAELKRRPFVGCLRAMRLNGVTLNLEGRANATEGTSPNCTGRC
SHPRFPCFHGGRCVERYSYYTCDCDLTAFDGPYCNRDIGGFFEPGTWMRYNLQSALRSAA
REFSHMLSRPVPGYEPGYVPGYDTPGYVPGYHGPGYRLPEYPQPGRPVPGYRGPVYNVTG
EEVSFSFSTSSAPAVLLYVSSFVRDYMAVLIKEDGTLQLRYQLGTSPYVYQLTTRPVTDG
QPHSVNITRVYRNLFIQVDYFSMTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQRY
NTPGFSGCLSGVRFNNVAPLKTHFRSPRPMTAELAEALRVQGELAESNCGAMPRLVSEVP
PELDPWYLPPDFPYYHDDGWVAILLGFLVAFLLLGLVGMLVLFYLQNHRYKGSYHTNEPK
ATHDYHAGGKPPLPATGAAQAPTPTPAPTQVPAPAPGPAPAPAPGPRDQNLPQILEESRS
E
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcgggctcctctgtgtcctcgccgccgccgtctcgggagtccagggctggggc
tactacggctgcgacgaggagctggtggggcccttgtatgcgcgttcgctgggtgcctcc
tcctactacgggctcttcacggcgccgcgcttcgcccggctgcacggcataagtggatgg
tcgcctcggattggggatccgaacccatggctccagatagacttaatgaagaagcaccgg
atccgagccgtggccacccagggctccttcaattcttgggactgggtcacacgctacatg
ctgctctacggtgaccgcgtggacagctggacacccttctaccagcgggggcacaacgcg
accttcttcgggaacgtgaatgagtccgcggtggtgcgccacgacctgcactaccacttc
accgcgcgctacatccgcatcgtgccgctggcctggaacccacgcggcaagatcggcctg
aggctcggcctctatggctgcccttacaaggccgacgtactctacttcgacggcgatgac
gccatctcctaccgcttcccacggggcgtcagccggagcctgtgggacgtgttcgcgttc
agtttcaagacggaagagaaggacgggctcctgttgcacgccgagggcgcccagggcgac
tacgtgacgctggagctgcagggggcgcacctgctgctgcacatgagcttgggcagcagc
cccatccagccgcggcccggccacaccacggtgagcgccggcggcgtcctcaatgaccag
cactggcactacgtgcgcctggaccgctttggccgcgatgccaatctcacgctggacggc
tacgtgcagcgcttcgtgctcaacggcgacttcgagatgctgaacctggacacggagatg
ttcgtggggggcctggtgggcgcggcgcagaagaacctggcctaccggcacaacttccgc
ggctgcatggagaacgtcatcttcaaccgcgtcaacatcgccgacctggctgtgcggcgc
cactcgcgcatcaccttcgagggtaaggtggccttccggtgcctggaccccgtgccgcac
cccatcaacttcggaggcccccacaacttcgtgcaggtgcccgggttcccgcgccgcggc
cgcctcgctgtctccttccgctttcgcacgtgggacctcacggggctgctgcttttctcc
cgcctgggggacgggctgggccacgtggagctgatgctcagcgaagggcaggtcaacgtg
tcggtggcgcagcctggccgcaagaagctgcagttcgctgccgggtaccgcctgaatgac
ggcttttggcacgaggtgaactttgtggcacaggagaaccacgcagtcatcagcatcgat
gacgtggagggtgcggaggtcagggtctcctacccactgctgatccgcacggggacctcc
tacttttttgggggttgtcccaagccggccggtcggtggggctgccactccaaccagacg
gccttccacggctgcatggagctgctcaaggtggacgggcagctggtcaacctgaccctg
gtggagttccggcggctcggctactacgctgaggtcctctttgacacgtgcggcatcacc
gacaggtgccaccctaacatgtgtgagcatgatgggcgctgctaccagtcctgggacgac
ttcatctgctactgcgagctgacaggctacaagggggagacctgccaccagcctttgtat
aaggaatcgtgtgaggcttatcggctcagcgggaagacttctggaaacttcaccattgac
cctgatggcagcggccccctgaagccatttgtagtgtactgtgatatccgagagaaccga
gcatggacagttgtgcggcacgacaggctgtggacgacgcgggtgacaggttccagcatg
gagcggcccttcctgggggccgtgcagtactggaatgcgtcctgggaggaagtcagcgcc
ctggccaacgcttcccagcactgtgaacagtggatcgagttctcctgttacaactcccgc
ctgctcaacacgggaggaggctacccctacagcttttggatcggccgaaacgaggagcag
cacttctactggggaggctcgcagcccgggatccagcgctgtgcctgcggcctggaccgg
agctgtgtggaccctgccctgcattgcaactgcgatgccgaccagccgcagtggaggacc
gacaagggactgctcaccttcgtggaccacctgcccgtcacgcaggtggtggtgggggac
acgaaccgctccacttccgaggctcagttcttcctgaggcccctgcgttgctatggcgac
cgaaattcttggaacaccatctccttccacaccggggccgcgcttcgcttccccccaatc
cgcgccaaccacagcctggacgtctccttctacttcaggacctcggccccctccggcgtc
ttcctggagaacatggggggcccctactgccagtggcgccgaccctacgtgcggctggag
ctcaacacctcccgggacgtggtctttgcctttgatgtgggcaacggggacgagaacctg
acggtgcactcggacgactttgagtttgatgacgacgagtggcacctggtccgcgctgaa
atcaacgtgaagcaggcccggctccgcgtggatcaccggccctgggtgctgcggcccatg
cccccgcagacctacatctggctggagtacgaccagcccctctacgtcggatctgcggag
ctcaagaggcgccccttcgtgggctgcttgagggccatgcgtctgaacggggtgactctg
aacctggaaggccgtgccaatgccaccgagggcacctcgcccaactgcacgggccgctgc
tcccacccccgcttcccctgtttccacggaggccgctgcgtggagcgctacagctactac
acgtgtgactgtgacctcacggcgttcgatgggccgtactgcaaccgcgacattggtggc
ttctttgagccaggcacctggatgcgctacaacctgcagtcggccctgcgctccgcggcc
cgcgagttctcccacatgctgagccggccggtgccaggctatgagcctggctacgtcccc
ggctacgacactcccggctacgtgcccggctaccacggccctgggtaccgcctgcccgag
tacccccagcctggccggcccgtgcctggctaccgcgggcctgtgtacaacgtcacgggt
gaggaggtgtccttcagcttcagcacgagctcggcccccgcggtcctgctctacgtcagc
tccttcgtgcgggactacatggccgtgctcatcaaggaggacgggaccctgcagctgcgc
tatcaactgggcaccagtccctatgtgtaccagctgaccacgcggccggtgaccgacggg
cagccgcacagtgtcaacatcacccgggtctaccgtaacctcttcatccaggtggactac
ttctccatgacagaacagaagttctcactgttggtggacagccagctggactcacccaag
gccttgtatctcgggcgcgtgatggagacaggagtcattgacccagagatccagcgctac
aacacccccggtttctcgggctgcctgtctggtgttcgattcaacaacgtggctcccctc
aagacccacttccgcagccctcggcccatgacggcagagctggccgaagccctccgcgtg
cagggcgagctggccgagtctaactgtggggccatgccacggctcgtctctgaggtgccg
cctgagctcgacccctggtacctgcccccagactttccctactaccatgacgacggctgg
gtggccattctgctaggcttcttggtggccttcctgctgctgggactggtggggatgctg
gtgctcttctatctgcagaaccaccgctacaagggctcctatcacaccaacgagcccaag
gccacccacgactaccatgctggtggcaaacctcccctgcctgccacaggcgccgcccag
gcccctacccccacaccagctcccacccaagttccggcccccgctcctggtccagccccg
gccccggcccctggccctcgggaccagaacctaccccagatcctggaggagtccaggtca
gaatga
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