Oryctolagus cuniculus (rabbit): 100352485
Help
Entry
100352485 CDS
T03373
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2 isoform X2
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04810
Regulation of actin cytoskeleton
ocu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100352485
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100352485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100352485
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100352485
Factors involved in mRNA localization
Other mRNA localization factors
100352485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
zf-CW
Motif
Other DBs
NCBI-GeneID:
100352485
NCBI-ProteinID:
XP_002710385
Ensembl:
ENSOCUG00000011780
UniProt:
G1T1Z6
LinkDB
All DBs
Position
3:38620575..38751712
Genome browser
AA seq
1253 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD
IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSKWTCTQSSISPQYNICEQMVQIRDDHIRFI
SELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSAHVMEVYSWKLVHPTD
KFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQAIRNTIY
AALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGREPPNDPCLRGEKDPKG
GFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKQSFF
FTHLLNISEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMM
EYVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSV
LLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLD
QAISRFESEDLTSIVELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRITL
HVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHI
YSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICR
LPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCD
LLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLL
TKERLCCGLSMFEVILTRIRSYLQDPIWRGPPPTNGVMHVDECVEFHRLWSAMQFVYCIP
VGTNEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPL
KKMADRIRKYQILNNEVFAILNKYMKSVETDSSTVEHVRCFQPPIHQSLATTC
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccacgtcaccctggaagatgccctgtccaacgtggacctgctggaggagctg
cccctccctgaccagcaaccatgcatcgagcctccgccttcttccatcatgtaccaggct
aacttcgacacaaactttgaggacaggaatgcattcgtcacaggcattgcaaggtacatt
gagcaggctacggtccactcgagcatgaatgaaatgctggaagaaggtcacgagtacgcc
gtcatgctgtacacctggcgcagctgttcccgggccattccccaggtgaaatgcaatgag
cagcccaaccgggtggagatctatgagaagacagtggaggtgctggagccagaggtcacg
aagctcatgaagttcatgtactttcagcgcaaggccatcgagcggttctgcagtgaggtg
aagcggctgtgccacgcagagcgcaggaaggactttgtctccgaggcctacctcctgacc
ctgggcaagttcatcaacatgttcgccgtcctggacgagctgaagaacatgaagtgcagc
gtcaagaatgaccactctgcctacaagagggcagcccagttcctcaggaagatggcagac
ccccaatctatccaggagtcgcagaacctctccatgttcctggccaaccacaacaggatc
actcagtgtctccatcagcagctggaagtgatccccggctacgaggagctgctggcggac
attgtcaacatctgcgtggattactacgagaacaagatgtacctgacccccagcgagaag
cacatgctccttaaggtaatgggctttggcctctacctgatggatggaaatgtcagtaac
atctacaaactggatgccaagaagagaatcaaccttagcaaaattgataagttttttaag
cagctgcaggtggtgccccttttcggcgacatgcagatagagctggccagatacattaag
accagtgctcactatgaagagaacaagtccaagtggacgtgcacgcagagcagcatcagc
ccccaatacaacatctgcgagcagatggttcagatccgggatgaccacatccgcttcatc
tccgagctggctcgctacagcaacagcgaggtggtgacgggctccgggctggacagccag
aagtcagacgaagagtaccgggagctctttgacctggccctgcgtggcctgcagcttctg
tccaagtggagcgcccacgtcatggaggtgtactcctggaagctggtgcatcccacagac
aagttctgcaacaaggactgtcctggcacggcggaggagtatgagagagccacacgttac
aattacaccagcgaggagaagttcgcctttgtggaggtgatcgccatgatcaaggggctg
caggtgctcatgggcaggatggagagtgtcttcaaccaggccatcaggaacaccatctac
gcagccctgcaggactttgcccaggtgaccctgcgcgagcccctgaggcaggccgtgcgt
aagaagaagaacgtcctcatcagcgtcctgcaggctattcggaagaccatctgtgactgg
gaaggcggacgtgagccccccaatgacccgtgcttgagaggggagaaggacccaaagggc
gggtttgacatcaaggtgccccggcgagctgtggggccgtccagcacccagctgtacatg
gtgcggacgatgcttgaatcgctcatcgcagataaaagtggctccaagaagaccctgcga
agcagcctggacgggcccatcgtcctggccatcgaggacttccacaaacagtccttcttc
ttcacacacctgctcaacatcagtgaagctctccagcaatgttgcgacctctctcagctc
tggttccgagaattcttcctggagttaactatgggccggcgaatccagttccccattgag
atgtccatgccttggattctaacagaccatatcctggaaaccaaagaaccttccatgatg
gagtacgtcctctaccctttggacctgtacaacgacagtgcctactatgccctgacgaag
tttaaaaagcagttcctgtatgatgagatcgaagccgaggtgaacctgtgcttcgatcag
tttgtctacaagctggcagatcagatctttgcttactacaaagcaatggccggcagcgtc
ctgttggataaacgattcagagcagagtgtaagaattacggagtcatcattccgtaccca
ccgtccaaccgctacgaaacgctgctgaaacagagacatgtccagctgttgggtagatcc
attgacttgaatagactcatcacccagcgcatttctgctgctatgtataaatccttggac
caggccatcagccgctttgagagtgaggatctgacctccatcgtggagctggaatggctg
ctggagattaaccggctcacgcaccgactgctctgtaagcacatgacgctggacagcttc
gacgccatgttccgggaggccaatcacaatgtgtcggccccctacgggcgcatcaccctg
catgtcttctgggagctgaactttgacttcctccccaactactgctacaatgggtccaca
aaccgttttgtccggactgccattcctttcacccaagaaccacaacgagacaaacccgcc
aacgtccagccttattacctctatggctccaagcccctcaacattgcctacagccacatc
tacagctcctacaggaacttcgtggggcccccgcacttcaagaccatctgcagactgctg
ggttaccagggcattgccgtggtcatggaggagctgctgaagatcgtcaagagcttgctc
caagggaccatcctccagtatgtgaaaactctgatagaggtgatgcccaagatatgccgc
ttgccccggcacgagtacggctctccagggatcctggagttcttccaccaccagctgaag
gacatcattgagtatgcagagctgaaaacagacgtgttccagagcctgagggaagtgggc
aacgccatcctgttctgcctcctcatagaacaggcgctgtcccaggaggaagtctgtgac
ctgctccacgctgcaccattccaaaacatcttgcccagggtctacatcaaagagggggag
cgcctggaggtccgcatgaagcgcctggaggccaagtacgccccgcttcacctggtgccc
ctgatcgagcggctggggacccctcagcaaatcgccatcgcccgagagggggacctgctg
accaaggagcggctgtgctgcggtctgtccatgttcgaggtcatcctgacccgcatccgc
agctacctgcaggaccccatctggcggggtccaccgcccaccaacggcgtcatgcacgta
gacgagtgtgtcgagttccaccggctctggagtgccatgcagttcgtctactgcatccct
gtggggaccaatgagttcacagcagagcagtgtttcggggatggcttgaactgggctggc
tgctccatcatcgtcctgctgggccagcagcgtcgcttcgacctgtttgacttctgttac
cacctgctcaaagttcagaggcaggacgggaaagacgaaattattaaaaatgtgcccctt
aagaagatggccgaccgcatcaggaagtaccagatcttgaacaatgaggtctttgccatc
ctgaacaagtacatgaagtctgtggagacagacagttccactgtggagcacgtgcgctgc
ttccagccacccatccaccagtccctggccaccacctgctag
DBGET
integrated database retrieval system
