Oryctolagus cuniculus (rabbit): 100353818
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Entry
100353818 CDS
T03373
Name
(RefSeq) short transient receptor potential channel 4 isoform X2
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04360
Axon guidance
ocu04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100353818
09158 Development and regeneration
04360 Axon guidance
100353818
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocu04040
]
100353818
Ion channels [BR:
ocu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100353818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank_4
Ank
Ank_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
100353818
NCBI-ProteinID:
XP_002721133
Ensembl:
ENSOCUG00000012256
LinkDB
All DBs
Position
Unknown
AA seq
977 aa
AA seq
DB search
MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALNPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YEETKGLSCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLIKWIWTHLCKKKMRRKPESFGTIGRRAADNLRRHHQYQEVMRNLVKRYVAA
MIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLRGSKLSTIQSANAAKEASNSADSDEK
SDNEGNSKDKKKNFSLFDLTTLIHPRSAAIASERHNISNGSALVVQEPPREKQRKVNFVT
DIKNFGLFHRRSKQNAAEQNANQIFSVSEEVARQQAAGPLERNIQLESRGLVSRGDLNIP
GLSEQCVLVDHRERNTDSLGLQVGKRTCSFESDKVVVEDTVPIIPKEKHSKEEDSSIDYD
LNLTDTVTHEDYVTTRL
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttttattacaaaagaaatgttaatgctccctacagagaccgcatccctctg
aggatagtaagagcagaatcagaactctcaccatcagaaaaagcctatttgaatgcggta
gaaaaaggagattatgcaagtgtcaagaaatctctagaggaagctgaaatttatttcaaa
atcaatattaattgcattgatcctcttggaagaactgctctcctcattgccattgaaaat
gagaacttggagctcattgaactgctgttaagctttaatgtttatgttggagatgctctg
ttacatgcaatcagaaaagaagtcgtcggagctgttgagctgttattgaaccacaaaaag
ccaagtggagaaaaacaggtgcctcctatactgcttgataagcaattctctgaattcact
ccggacatcacaccaatcattttggcagcccatacaaataattatgagataataaaactt
ttggttcagaaaggagtctcggtgccccgaccccatgaggttcgttgtaactgtgtagaa
tgtgtctccagttcagatgtggacagcctccgtcactcacgctccagactcaacatctac
aaggccttggccagcccctcgctcattgcactgtcaagtgaagatccttttctcacagcc
tttcagctaagttgggaacttcaagaactgagtaaggtagaaaatgaattcaagtcagag
tatgaggagctgtcacgacagtgcaaacagtttgcaaaggacctcttggatcagacaaga
agttccagagaactggaaatcattcttaattaccgagatgacaatagtttgatagaagag
caaagtggaaatgatcttgcaagactaaaattggccattaagtaccgtcaaaaggagttt
gttgcccagcccaattgtcaacagctgctcgcatctcgctggtatgatgaatttcctggc
tggaggaggagacattgggcagtgaagatggtgacatgtttcataataggactgcttttc
cctgtcttctccgtgtgctacctgatagctcctaaaagtccgctgggactgttcatcaga
aagccatttatcaagtttatctgccacacagcctcctatttgacttttttgttcctcctg
ctgcttgcctctcagcacatcgacaggtcagacttgaacaggcaaggtccaccaccaacc
atcgtcgaatggatgatattaccatgggtcctgggtttcatatggggagaaattaagcag
atgtgggacggcggacttcaagattatatccatgattggtggaatctaatggattttgtg
atgaattctttatacttagcaacaatctccttgaaaattgtcgcatttgtaaagtacagt
gctcttaatccacgagaatcttgggacatgtggcatcccactctggtggctgaggcttta
tttgctattgcaaacatcttcagttccttgcgtctgatctcactatttactgcaaattct
catctgggacctctgcaaatatctctgggaagaatgctcctggacattttgaagtttctg
ttcatatactgccttgtgttactagcatttgcaaatggccttaatcaattgtacttctat
tatgaagaaacgaaagggttaagctgcaaaggcatacgatgtgaaaagcagaataatgca
ttttcaacgttatttgagacacttcaatccctgttttggtcaatatttgggctcatcaat
ttatatgtgaccaatgttaaagcccagcatgaattcactgagtttgttggtgccaccatg
tttgggacatacaatgtcatctctctagttgtcttactcaacatgttaatagctatgatg
aataattcttaccaacttattgctgaccatgcagatatagaatggaaatttgctcgaaca
aagctttggatgagttactttgaagaaggaggtactctgcctactcccttcaatgtcatc
ccaagtcccaagtccctctggtacctgatcaagtggatatggacacatctgtgcaagaaa
aagatgagaagaaaaccagagagttttggaacaatagggaggagagctgctgataatttg
aggcgacatcaccaatatcaagaagttatgaggaacctggtgaagcgatacgttgctgca
atgattagagacgctaaaactgaagaaggcctcactgaagaaaacttcaaggaactaaaa
caagacatttctagtttccgctttgaagttctgggattactaagaggaagcaaactttcc
acaatacaatcggcaaatgccgcgaaggaggcttctaactcagctgactcagatgaaaag
agtgataacgaaggtaatagcaaagacaagaaaaagaatttcagccttttcgatttaacc
accctgattcatccaagatcagcagcaattgcctctgaacgacataacataagcaatggc
tctgccctggtggtgcaggaaccaccgagggagaagcagagaaaagtgaattttgtgacc
gatatcaaaaacttcgggttatttcatagacggtcaaagcaaaacgctgctgagcaaaac
gcaaaccaaatcttctctgtttcagaagaagttgctcgtcaacaggctgcaggaccactt
gagagaaatattcaactggaatcccgaggattagtgtcacggggtgatctgaacattcct
ggtctcagtgaacagtgtgtgttagtagaccatagagaaaggaacacggactcactgggt
ttacaggtaggcaagagaacgtgttcattcgagtcagacaaggtggtggtggaggacact
gttcccattataccaaaggagaagcactcaaaggaagaggattctagcatagactatgac
ttaaacctcaccgacacagtcacccatgaagattacgtgacaacgagattgtga
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integrated database retrieval system
