Oryctolagus cuniculus (rabbit): 100359097
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Entry
100359097 CDS
T03373
Name
(RefSeq) transmembrane channel-like protein 1 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocu02000
]
100359097
03037 Cilium and associated proteins [BR:
ocu03037
]
100359097
Transporters [BR:
ocu02000
]
Other transporters
Pores ion channels [TC:
1
]
100359097
Cilium and associated proteins [BR:
ocu03037
]
Other cilia and associated proteins
Stereociliary proteins
100359097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
100359097
NCBI-ProteinID:
XP_051714707
Ensembl:
ENSOCUG00000009437
LinkDB
All DBs
Position
1:73201009..73414558
Genome browser
AA seq
760 aa
AA seq
DB search
MPPKKVQIQVEEKDDTEESSSGEEEEEEEKLPRRESLRPKRKRKRDVINEDDPEPEPEDE
ETRKAREKERRRRLRRGAEEEEEIDEEELERLKAELDEKRQMIATVKCKPWKMEKKIEVL
KEAKKFVSENEGALGKGKGKRWFAFKMMMAKKWAKFLRDFENFKAACVPWENKIKAIESQ
FGSSVASYFLFLRWMYGVNMVLFILTFTLIILPEYLWGLPYGSLPRKTVPRAEEASAANF
GVLYDFNGLAQYSVLFYGYYDNKRTIGWLNFRLPLSYFLVGIMCIGYSFLVVLKAMTKNI
GDDGGGDDNTFNFSWKVFCSWDYLIGNPETADNKFNSITMNFKEAIIEERAAQVEENVHL
IRFLRFLANFFVFLTLGASGYLIFWAVKRSQEFAQQDPDTLGWWEKNEMNMVMSLLGMFC
PTLFDLFAELEDYHPLIALKWLLGRIFALLLGNLYVFILALMDEINNKIEEEKLVKANIT
LWEANMIKAYNASLSGNSTGPPFFVHPADVPRGPCWETMVGQEFVRLTVSDVLTTYVTIL
IGDFLRACFVRFCNYCWCWDLEYGYPSYTEFDISGNVLALIFNQGMIWMGSFFAPSLPGI
NILRLHTSMYFQCWAVMCCNVPEARVFKASRSNNFYLGMLLLILFLSTMPVLYMIVSLPP
SFDCGPFSGKNRMFEVIGETLEHDFPSWMAKILRQLSNPGLVIAVVLVMALTIYYLNATA
KGQKAANLDLKKKMKLQALENKMRNKKMAAARAAAAAGGQ
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctaaaaaagtacaaatccaagtggaggaaaaagatgatactgaagaaagttca
agtggagaggaagaggaggaggaagaaaaactacctagaagagagagcttgagaccaaaa
aggaaacgaaaaagagatgttatcaatgaggatgatccagaacctgagccagaagatgaa
gaaacaaggaaggcaagagagaaagagaggaggaggaggttgcggagaggagcggaggaa
gaagaagaaattgatgaagaggagttggaaagattaaaggcagaattagatgagaagaga
caaatgattgctactgtcaaatgcaaaccttggaagatggaaaagaaaattgaagttctc
aaggaagcaaaaaaatttgtgagtgaaaatgaaggtgctcttgggaaaggaaaaggcaag
cggtggtttgcctttaagatgatgatggccaagaaatgggcaaaatttcttcgtgatttt
gagaacttcaaagctgcttgtgtcccatgggaaaataaaatcaaggcaattgaaagccag
ttcggctcgtcagtggcctcctacttcctcttcctgagatggatgtatggagtaaacatg
gttctctttatcctgacattcaccctcatcatattgccagagtacctctggggtttgcca
tacggcagtttacctaggaaaacggttcccagagctgaagaggcatcggcagcaaacttt
ggtgtgctgtatgatttcaacggcttggcacaatattccgtcctcttttatggctattat
gacaataaacgaacaattggatggctgaatttcaggttgccgctctcctattttctggtg
gggattatgtgcattggatacagctttctggttgtcctcaaagcgatgaccaaaaatatt
ggtgacgatggaggtggtgatgacaacaccttcaactttagctggaaggtgttctgtagc
tgggactacctgattggcaaccctgagacagcagacaacaaatttaattctatcacaatg
aactttaaggaagctataatagaagaaagagctgctcaagtagaagaaaacgtccacttg
atcagattcctgagatttcttgctaacttcttcgtgttcctaacacttggtgcgagtgga
tacctcatcttttgggctgtgaagcgatcccaagaatttgcacagcaggatcctgacacc
cttgggtggtgggaaaaaaatgaaatgaacatggttatgtccctcctggggatgttctgc
ccaacactgtttgacttatttgctgaactggaagactatcatcctctcattgctctgaag
tggctattgggacgcatttttgctcttcttttaggcaacttgtatgtatttattcttgcc
ttgatggatgagattaacaacaagattgaagaggagaagctagtaaaggccaatattacc
ctatgggaagccaacatgatcaaggcctacaacgcatcactctctgggaatagcactggg
ccacccttttttgttcaccctgcagatgtacctcgaggaccctgctgggaaacaatggtg
ggccaggaatttgtgcgactgacagtttctgatgtcctgaccacttacgtcaccatcctc
atcggggactttctcagggcatgttttgtgagattttgcaattactgctggtgctgggat
ttggaatatggatatccttcatacaccgaatttgacatcagtggcaatgtcctcgctctg
atcttcaaccaaggcatgatctggatgggttccttctttgctcccagtctcccaggcatc
aatatccttcgactccacacatccatgtacttccagtgctgggctgtgatgtgttgcaac
gttcctgaggccagagtcttcaaagcatccagatcaaataatttctacctgggcatgctg
ttgctcatcctcttcctgtccaccatgccggtgttgtacatgatcgtgtccctcccgcca
tcttttgattgtggccctttcagtggcaaaaatcggatgttcgaggtcattggtgagact
ctggagcatgattttccaagctggatggcgaagatcttgaggcaactttcgaaccctgga
ctggtcattgctgttgttcttgtgatggctttgaccatctattatctcaatgctactgcc
aagggccagaaggcagcaaatctggatttaaaaaagaagatgaaactgcaagctttggag
aacaaaatgcgaaacaagaaaatggcagctgcacgagcagctgcagctgctggtggccag
tga
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