Oceanirhabdus sp. W0125-5: OW730_14805
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Entry
OW730_14805 CDS
T08747
Name
(GenBank) ATP-grasp domain-containing protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ocw
Oceanirhabdus sp. W0125-5
Pathway
ocw00470
D-Amino acid metabolism
ocw00550
Peptidoglycan biosynthesis
ocw01100
Metabolic pathways
ocw01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ocw00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OW730_14805
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OW730_14805
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
OW730_14805
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ocw01011
]
OW730_14805
Enzymes [BR:
ocw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
OW730_14805
Peptidoglycan biosynthesis and degradation proteins [BR:
ocw01011
]
Precursor biosynthesis
Amino acid ligase
OW730_14805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
ATP-grasp_4
ATP-grasp_3
GARS_A
CPSase_L_D2
Peptidase_M20
ATPgrasp_ST
N_Asn_amidohyd
Motif
Other DBs
NCBI-ProteinID:
WBW94963
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All DBs
Position
3213719..3215863
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AA seq
714 aa
AA seq
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MKVAIIYNKDFNGVINRFGLQNREIYSEDSVKRVFKALESGGHNVNIIDGNMYVAESLQE
FMPKVLEGEKMGMVFNMAYGIQGESRYTHIPAFLEMLGVPYVGSNPSGHSLALDKVFTKI
VLQKYSIPTPEFWVFNSHKDEIKDMEYPCIAKPKMESVSFGLKVVYNDDELRESVEFITN
EFKQQVLVERFIRGREFCVGLLGNGEDLEAFPVLEIDLDNNPDAIQTCDDKKYAPKNKIC
PADISEELANEMIELSKKAFNVLHLKDFARVDIRLDENGNIYILEINSMASLGRTGSYVH
AASVAGYSFEKLVNKILEVAGKRYFIENNENEPNESSQSINVKIRSYLSENQENFENLTK
KAVDLNTYVRNIEGVNTFSDLIIKNLTPLGFKSTIIPQIEIGDFVFLTNCEEEEYDVLIL
GNTDDNVKLPKHKNFEKNQNKLYGTGIWKYKGTIISQIAALKALDKLKLLKEIKIGILLT
SDNSIQGKFSKDIIKNISQKAKMVIGSNGSNSEGGIITSRSGSAIYECYMNLLNKEGAFD
SSEAVALLSKCISKWSSMSKREDGLIVLPEDINIQSRIINSYSNGYVRLNVRFNNNEDIK
DLDERIRNVIPKKLKNKFQIYIKGGVTRPAMQSNKISNELFENLKKIANKIDVRLKEEHV
WESSNICYVSDSIPTIDGIGPTGCKVNDNLEFIYKHSILEKAYLIALILYDAKK
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttgcaattatttacaataaggattttaatggagttattaataggtttgggctt
caaaatagagaaatttattcagaagatagtgtaaagagagttttcaaagcattagagtca
gggggacataatgtaaatataattgatggtaacatgtatgtagccgaaagtcttcaagaa
tttatgccaaaggttcttgagggagaaaagatgggaatggtatttaatatggcttatggt
atacagggggaaagtagatatactcatatacccgcctttttagaaatgttaggagttcct
tatgtaggttcaaatccatcaggacactcacttgcactggataaagtgtttactaaaatt
gttttgcaaaaatattctattccaactccagaattttgggtatttaattcacataaagat
gaaataaaggatatggaatatccatgcattgctaaaccgaaaatggagtcagtatcattt
ggattaaaggttgtatataatgatgatgagttaagggagtcagttgaatttattactaat
gaatttaaacaacaagttttggtagaaaggtttattagaggaagagaattttgcgttgga
ttgttaggtaatggtgaagatttagaagcatttccagtattagagatagatttggataat
aaccctgatgcaattcaaacatgtgatgataaaaaatatgcccctaaaaacaaaatttgc
cctgcagatatttcagaagaattggcaaatgaaatgattgaacttagtaagaaagctttt
aatgtgttacatttaaaagattttgcaagagttgatattaggttagatgagaatggaaat
atatatatattagaaataaattctatggctagcttaggaagaactggttcatatgttcat
gcagcgagtgtagcaggatatagttttgagaaattagtcaataaaatattggaagtggca
ggtaaaaggtattttatagaaaataatgagaatgaaccaaacgagagttcacagagtata
aatgttaaaatacgaagttatttgagtgaaaatcaagaaaattttgaaaatttaacaaag
aaagcagttgatttgaatacttacgttaggaatattgagggagttaatactttttctgat
ttaattataaaaaatttaaccccattaggtttcaagtcaacaattataccccaaatagaa
attggtgactttgtatttttaacaaattgtgaagaagaagagtatgatgtgttaatttta
ggaaatacagatgataatgtgaaattgcccaagcataaaaatttcgaaaaaaatcaaaac
aaattatatggaactggaatatggaaatacaaaggaactattatctcacaaatagcagca
ttaaaggctcttgataaactgaaacttttaaaagaaataaaaattggcatattactaaca
agtgataattctatccaaggaaaattttcaaaggatataataaagaatatctcacaaaaa
gctaagatggttataggatcaaatggaagtaattcagaaggaggaataataacatccaga
tcaggctctgcgatttatgagtgttatatgaatcttttaaacaaggagggagcttttgat
tcttcggaagcagttgcactattatctaaatgtatatcaaagtggtcgagtatgagtaag
cgagaagatggtttaattgtgcttccagaggatataaacattcaatcaagaatcataaat
tcttattcaaatggatatgtaaggttgaatgttagatttaataataatgaagatataaaa
gatttggatgaaagaattaggaatgtaatccctaagaaactaaagaataaatttcaaatc
tatatcaaagggggagttacaagaccggctatgcaaagcaataagatttctaatgaacta
tttgagaatcttaaaaaaattgcaaataagatagatgttagattgaaggaagaacatgta
tgggaatcatcaaatatttgttatgttagtgattcaattcctaccattgatggtataggt
ccaacaggttgtaaagttaacgataatttagagttcatttacaaacatagcattcttgag
aaagcatatcttatagccttaatattatatgatgcaaaaaaataa
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