Oryx dammah (scimitar-horned oryx): 120856471
Help
Entry
120856471 CDS
T07255
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda04136
Autophagy - other
oda04140
Autophagy - animal
oda04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120856471 (ATG16L1)
04136 Autophagy - other
120856471 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120856471 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oda04131
]
120856471 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
oda03029
]
120856471 (ATG16L1)
Membrane trafficking [BR:
oda04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
120856471 (ATG16L1)
Others
Rab GTPases of specific organelles
Auto phagosome
120856471 (ATG16L1)
Mitochondrial biogenesis [BR:
oda03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120856471 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG16
WD40
eIF2A
ANAPC4_WD40
NBCH_WD40
CCDC93_CC
DUF2332
Vma22_CCDC115
HTH_6
HEF_HK
PALB2_WD40
Phage_GPO
Fez1
Motif
Other DBs
NCBI-GeneID:
120856471
NCBI-ProteinID:
XP_040087740
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MSSGLRATVFPRWKRHISEELRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAHKLQAEK
HDVPNRHEISPGHDGSWNDSQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQQK
DKEMQMNEAKIAEYLQTISDLETECQELRTKLQDLERANQTLKDEYDALQITFTALEEKL
RKTSEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVLADETSEHPEETSPVRAISRAATKRLSQPAGGLLDSITNIFGLSESPLLGHHSSDAAR
RRSVSSFPVPQDNVDPHPGAGKEVRVPTTAVSVFDAHDGEVNAVQFSPGSRLLATGGMDR
RVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTL
TGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMS
GHFDKKIRFWDIRSESIVREMELLGKITALDLNPERTELLSCSRDDLLKIIDLRINAVRQ
TFSAPGFKCGSDWTRAVFSPDGSYVAAGAAEGSLYIWNVLSGKVEKILSKHHSSSINAVA
WSPAGSHVVTVDKGSKAVLWSEY
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgggcctccgcgccaccgtcttcccgcgttggaagcgccacatctcggaggag
ctgaggcgccgggaccggctgcagaggcaggcgttcgaggagatcatcctgcagtataac
aagttgctggaaaagtcagatcttcattcagtgctggcccataagctacaagccgaaaag
catgacgtaccaaacaggcatgagataagtcccggacatgatggttcatggaatgatagt
cagctgcaagaaatggcccagctgagaattaaacaccaagaagaactgactgaattgcac
aagaaacgtggggagttagcccagttggtgattgacctgaataaccaaatgcagcagaag
gacaaggagatgcagatgaacgaagccaaaattgcagaatacctgcagaccatctctgac
ctggagaccgagtgtcaggagctgcgcactaagcttcaggaccttgaaagagccaaccag
accctgaaggatgaatacgacgccctgcagatcactttcaccgccctcgaggagaagctg
cggaaaacttccgaggagaaccaggagctggtcacccggtggatggccgagaaagcgcag
gaggccaaccgcctaaacgcggagaatgaaaaggactcaaggaggcggcaagcccggctg
cagaaggagctcgcagaagccgcgaaggagcctctgccagttgagcaggatgatgacatt
gaagtccttgcggatgaaacctctgagcaccctgaggagacctctcccgtgcgagccatc
agcagagctgccactaagcgactctcgcagcctgctggaggccttctggattctatcact
aatatctttggtctgtccgagtctccccttttgggacatcactcttctgacgctgccagg
aggcgctctgtctcttcctttccagttccccaggataacgtggatcctcatcccggtgct
ggtaaagaagtgcgagtgccaacgactgcagtgtctgtctttgacgcgcatgacggggag
gtcaacgctgtgcagttcagcccaggttcccggctcctggccacaggaggcatggatcgg
agggtgaagctctgggaagtgtttggagacaaatgtgaattcaagggctccctgtctggc
agtaatgcaggaattacaagcattgaatttgatagtgctggatcttacctcttagcagct
tctaatgattttgcaagccgcatctggaccgtggatgactaccggttacggcacacgctc
acgggacacagcggcaaagtgctgtctgccaagttcctgctggacaacgcgcgtatcgtt
tctggaagtcacgaccggaccctcaaactctgggatctacgcagcaaagtctgcataaag
acggtatttgcgggatccagctgcaatgacatcgtctgcacagagcagtgtgtgatgagt
ggacattttgacaagaaaattcgtttctgggacatccggtcagagagtattgtccgagag
atggagctcttgggaaagatcactgccctggacttaaacccagaaagaactgaactcctc
agctgctctcgagatgacctgctgaaaattatagacctacgaataaatgctgtcagacag
acattcagtgcaccaggcttcaaatgcggctccgactggacgagagctgtgttcagccct
gacggcagttatgtagcagcgggcgcggccgagggctcgctgtacatctggaacgtgctg
tccgggaaagtggagaagatcctctcaaagcatcacagctcgtccatcaacgcggtggcc
tggtcccccgccggctcccacgtggtcactgtggacaaaggaagtaaggccgtgctgtgg
tcggagtattga
DBGET
integrated database retrieval system
