Oryx dammah (scimitar-horned oryx): 120873196
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Entry
120873196 CDS
T07255
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oda03021
]
120873196 (TAF1C)
Transcription machinery [BR:
oda03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
120873196 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
120873196
NCBI-ProteinID:
XP_040109928
LinkDB
All DBs
Position
Unknown
AA seq
890 aa
AA seq
DB search
MDFPSSLPPSLFMTGPLGQSDVPDLSFMCSWRDALTLPAFSPQGSQDSAPHVAKALLWEP
DTPGPLPLLPPGPDPWDPGLTAKDLLFRGGYQFRRHPRAVLDVTEQISRFLWNHGDIAFA
PLGRLLLENFKLEGAHSRSKTKTVVSVKRLHQDLGGHQPWGCPWAYLSQRQRRFSILGAP
ILSTSVASLLGELLHEELALRWERLLLDDACTGGALAWVPGRTPGAGQLVYPMGSAMDTL
CFQKVSLTPESEPQVLRDPGRIQLRGPIRQVVTRSVQGEALLAVRSDHHCALWKVSAQGQ
PAPLQVLQVDKGATGISLSPHLPGELVICSRSGAVCLWSAEDRLRQIYKDPETLVFRDPS
PWRWADFTAHPRVLTVGDRTGVKMVDTQGPLGCGMLLFRGGAEASCQKGERVLLTQHLGD
LGPESLHPMLHLVCTQFSLYLMDERLPLVPLLKWNHGLHSAPLLARLLPPPSPGLPQPLL
LASQGGELQLLHLAGVGASTPRLAGLPQSLPTRSDSLSAFPLLEPKNHRRLQERLKAPTI
GLAVAIPPPASTPVLSLFQLSAAGDIFHQRLHLRADPGPNAHAPAASWTPQAAACCSRWL
KALLEVPLAPPVWAAPTFSHRRLLGGFEPQKVEGSVPEGFRRAMAQGRLLQQRDLGLLPP
EERPPAPEPGPEDELSERLEAAWEFGAAAWWERRRGARAGPGKQPKRQKRRTQLSSTFSS
LSGRVDLSDAVSPPPSPDHTLPEARPQPPRTPPSQELTQEPWAQGIPSERQQTLRDYMAE
LPLCTDTPGGASALSSQTPSVRATPSRQHAPQIQQLPGGDTQEGTTLLSSQTPSVRATPS
RQHTPRDGIVQQLPRGDTLEGATPPSSQTPSVLTTRSSSQRLRKKPRMGF
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggatttccccagctccctcccaccctcgttgttcatgactggcccccttggtcagagc
gatgtccctgacctgtcgttcatgtgcagctggagagatgcactgaccctgccggcgttc
tcaccccaaggctctcaggacagcgcgccgcatgtggccaaggccctgctctgggagccg
gacacacctgggcccctgcccttgctgcctcctggtcccgatccctgggaccctggcctg
actgccaaagatctgcttttccggggaggctaccagttccggagacatccccgagccgtg
ctggatgttactgagcagatcagccggttcttgtggaaccatggagacatagcctttgca
cccctggggaggctactgctggagaatttcaaactggaaggagcacatagccgctctaag
acgaagacagtggtcagtgtgaagaggctacaccaggacctcggtggacaccagccctgg
ggctgtccctgggcttacctcagccagcgccagcgccggttctccatccttggggccccg
atcctgagcacgtcggtggcgagcctcctgggagagctgctgcacgaggagctggccctg
cgctgggagcggctgctcctggatgatgcctgcaccgggggtgcgctggcctgggtgccc
ggcaggacccccggggccgggcagctggtctaccccatgggcagtgccatggacacactg
tgtttccagaaggtcagtctgaccccagagagcgagccccaggttctcagagaccctggc
cgtatccagctccggggacctatccggcaggtggtgacccgcagcgtgcagggagaagct
ctgctggctgtccgctctgaccaccactgtgccctgtggaaggtcagtgcgcaggggcag
ccggcccctctccaggtgctgcaggtggacaagggggccacggggatcagcctcagccct
cacctgcccggagagctggtcatctgcagccgctctggagccgtctgcctgtggagcgct
gaagacaggctgcggcaaatctacaaggaccctgagaccctggtgttccgggacccttct
ccctggcgctgggcagacttcaccgcccaccctcgagtgctgacggtgggtgaccgcacc
ggagtgaagatggtggacactcagggcccgctgggctgtggtatgctgctttttcgtgga
ggggcagaggcgtcatgccagaaaggagagcgagtcctgctcacccagcacctgggggat
ctcggccccgagtctctgcaccccatgctccacctcgtctgcacccagttctccctctac
ctgatggatgagcgcctccccttggtgcccctgctcaagtggaaccatggcctccactct
gcgcccctgctggcccggctgctgccgccgccgagcccaggcctcccccagccgctgctc
ctggccagccaaggcggggagctgcagctgctgcacctcgcaggagtgggggcctccaca
ccccggctggcggggctcccccagtctctccccaccaggagcgactccctctcggccttc
ccactgctggagcccaagaatcaccggcggctgcaagagcgtctgaaagcgcccaccata
ggtctggctgttgccatcccgccccccgcctccacaccagtgctgtcgctcttccagctt
tctgcggccggagatatcttccaccagcgcctccacctccgggcagaccccgggcccaat
gctcatgcccccgcagcttcctggacaccccaggccgctgcctgctgcagccggtggctg
aaggccctgctggaggtgcccctggctcccccggtgtgggcggcacccaccttctcccac
cggcggctgctgggaggcttcgagccacagaaggtggaggggtcggtgcccgagggtttc
cgcagggccatggcccaggggcggctcctacagcagagggacctgggcttgctccccccg
gaggagcggccccctgcccccgagcctggccctgaggatgagctcagcgagcgtctggag
gcagcctgggagtttggggcggcggcctggtgggagaggcggcggggcgcccgcgcgggc
cccgggaagcagcccaagcggcagaagcgcaggactcagctgtccagcaccttctcctcc
ctcagcggccgtgtggacctctcggacgccgtcagccccccacccagcccagaccataca
ctgcctgaggccaggccccagcccccaaggaccccgccctcccaggagctcacgcaggag
ccctgggcccagggcatcccctcagagcggcagcagaccctccgggactacatggctgag
ctgccgctctgcacggacaccccaggaggggcgtctgcgctctcctcccagacccccagt
gtccgagccacgccctccaggcagcatgccccccagatccagcagctgcccggaggggac
acccaagagggcaccaccctgctctcctcccagacccccagtgtccgggccacgccctct
aggcagcacaccccccgggatggcatagtccagcagctgccccgaggggacaccctagag
ggcgccaccccaccctcctcccagacccccagcgtcctgaccacacgctccagctctcag
cggctccggaagaagccccgcatgggcttctga
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