Ostrea edulis (European flat oyster): 125657785
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Entry
125657785 CDS
T09123
Name
(RefSeq) protocadherin Fat 4-like isoform X2
Organism
oed
Ostrea edulis (European flat oyster)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Motif
Other DBs
NCBI-GeneID:
125657785
NCBI-ProteinID:
XP_048744511
LinkDB
All DBs
Position
9:56366327..56403483
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AA seq
927 aa
AA seq
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MTNRIIHVSAIFFLVLVDKVFPQVTPCAGGTVGVDPAAYSSRTSTYGANSAFLIEDPLYQ
ITCCGAITSWEVSTSGSGRITLQIWRKLSSNVYQLLGQNVFTAGSGTFSPTDRIMVQHGD
YIGWYSSGPSVRYDTGTAILNRVKATMTALQPGDLQDWSTESPEGVSRNYAIRATVSASS
VPVFSGIPSLVTFPEETPQDTVVHSLTITDADATDVITLYTKSETSGYFTVDTTTFRIKT
TQDRIPLGSNYIVEVKAIDSCYKEATATVTFSVSNTDITMSFSSTTSSVFENSTSEEWLS
DVIVSDPMNDYTCFLQTTNVPFTVRQNNTGIQSFSLYLQKWPQLSASVTSSYTLTSQCTD
GVNTKTAIHTVSVIPNTKPAITNLGGGVTVTLDARTVLIGHFVYNVSASDNEEDDITFSL
ICTPSGCPFTIYNSGAILLTSRLITHSQSSYTLTVSVSDSYTQTADSSSLSVSITNRNTN
PTISIPRLTYVNENSPLGQSVLSLAVSDAESNQLSVHGIFTPANGMKYFDINPANGVVTT
STVHYIDYDILSTKDIVLVVCTSDGIAASSQTGTIRIVNINEPCYFTEDYYSIIREEGNS
QSTFPLPEYNVIDPDNGETFTFQKTCGNPYDNKVSINTNTGQFSFLGDYDLDIPGTVTTF
NCTLTVTDSGGNTDTTIVGVFVLYKNEFAPTFSVSSVTLTLQSHELIGSILTNFTAHDSD
LSSHDDGKFYYSLDQSSNSGEYFGIMTNGSIYIKEDLSPLYLGRTLSLTLTAKDYGSPSR
QSSVAITVQIPLSTTITNISPTERALQFENNTGNSVILALAAFLSVGMFSTIVYIIHKYT
LRGKQICKTKNTQQLSTSRTPKLRNSRKKSINSNDIKDNRNVKTTEEDELQTETKQPMPS
FETINSYETQTKFPINSDGIKDNQMEW
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatcgcattatacatgtatcggctatattttttctagtgctcgttgataaagtt
ttccctcaagtgacaccatgcgcgggcggcacggtaggggttgaccccgccgcttacagt
tcccgtacctctacctatggtgctaactctgccttcctcatcgaggatcctctctatcag
atcacatgctgcggtgccattacgtcatgggaagtttccacatccgggtcaggaagaatc
acattacaaatctggagaaaattatcttcaaatgtataccagcttctaggacaaaacgtg
ttcaccgcaggatcgggaaccttttctccaactgacagaataatggttcagcacggggat
tacattggatggtatagcagcggaccttctgttagatatgatacaggcactgctattttg
aacagagttaaggccacaatgacagcgttacaacccggtgaccttcaggactggagcact
gagtctcctgagggcgtgtccagaaattacgctattagggcaacagtttcagcaagctcg
gtacctgttttcagtggtataccaagtttagttacttttcccgaagagacaccacaagac
acagttgtccattctttgaccatcacggatgcagatgctacagacgtcattacactttac
acgaaatctgaaacgtcagggtattttactgtcgataccactacctttcggataaagaca
acacaggaccgaattcccttgggatcgaactacatagttgaggttaaggccattgacagc
tgttacaaagaggccactgccacggtcacgttctccgtcagcaacacggatataacgatg
tctttttcatcgacaacatcatctgtatttgaaaattctaccagtgaggaatggttgtct
gatgtcattgtatcagatccaatgaatgattatacgtgcttcctacagactaccaacgtt
ccgtttacagtaagacagaacaacactggaattcagagtttcagtctgtacttgcaaaaa
tggccacagctgagcgcttcggtgacatctagttatactttgacgtcacaatgcacagat
ggagtcaacaccaaaacagccatacacaccgtgtcagtaattcccaacaccaaacccgct
atcactaatctcgggggtggagttactgtgacgttagatgcaaggacagtgttgattggc
cactttgtatacaacgtatcagcttctgataacgaagaagacgacataacgttttcattg
atttgtactccatcaggatgcccctttaccatttacaacagcggtgccatattgttgacg
tcacgcctgatcacccacagtcaatcgtcgtacacacttacagtgagcgttagtgatagc
tatacacagacagcagacagcagctcacttagcgtgtccatcacaaacaggaatacaaat
ccaactatttccataccgcggctgacttatgtcaacgaaaactctcccttgggacaatcg
gtgctgtcattagctgtctcagacgcggaatcaaaccagctgtcagtacatggcatattt
actcctgccaacggaatgaagtattttgatattaatccagcaaatggggttgtaacaaca
tcaacagtacattatatcgactacgacatactatcaacaaaagacatcgttctagtggtc
tgcacgtcggacggcattgctgcctcctctcagacggggaccataagaattgtcaatatc
aacgaaccttgttattttacagaggattactatagcattatcagggaggagggcaatagc
caatctacatttcctcttccggaatacaacgtaatagatcctgacaacggtgaaacgttc
acatttcagaaaacgtgtggtaatccatacgacaacaaggtctcaatcaacaccaacaca
ggacaattttcttttcttggagattatgatctagatattccaggaacggtcacaactttc
aactgcacccttaccgtgacagattccggcggaaatacagacactactattgtgggcgtg
tttgttctatataaaaacgagtttgcaccaactttctcggtatcgtccgtaactttgact
ctccagtctcacgagctgattggctcaatattgacaaacttcactgcgcatgacagtgat
ctttcctcgcatgatgatggaaaattttattatagtttagaccaatcttctaactcgggt
gaatattttggaattatgacaaacggtagtatctacataaaagaagatttatcacctttg
tatctgggaagaacattatcattaaccctaacagcaaaggattacggaagtcccagtcga
caaagttctgtagcgattacagtccagattcccctatcgactaccattacaaacatatca
cctacagagagagccttacagtttgaaaataacacggggaactcagttatactagctcta
gctgcattcttatctgtaggaatgtttagtacaatcgtgtacataattcataaatataca
ttacgagggaaacagatttgcaaaacgaaaaatacacaacaactttctacatctcgaaca
ccaaaacttagaaattctcgcaaaaagtctataaatagcaacgatatcaaagataacagg
aatgtaaagacaacggaagaggacgagttacagacagagacaaaacagccaatgccatca
ttcgagacaataaactcatatgaaacacagacaaaattcccaattaacagcgatggaata
aaagacaatcaaatggagtggtaa
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