KEGG   Ostrea edulis (European flat oyster): 125678987
Entry
125678987         CDS       T09123                                 
Name
(RefSeq) la-related protein 1B-like isoform X1
  KO
K18757  la-related protein 1
Organism
oed  Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:oed00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oed03019]
    125678987
Messenger RNA biogenesis [BR:oed03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     125678987
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 125678987
NCBI-ProteinID: XP_048773777
LinkDB
Position
2:41026256..41063369
AA seq 1258 aa
MAAVSVGNATTSNESFHSEKNTVTRQSSDPELERPNPWKKKETVPSEPIEKVKEVPPAAD
PLKEEGETKGEKGEKEAKELKVKKFDNKTYVEAPLPKTNPWNKGKKNPAGPASPKAAAAK
PPIVEPEPVDVPKQKPVQPDVEVVKEKTEKASAPLSDENWPALTEVTEVLVPKKSIAMKS
TTGQQTPQTNGPQQVSSDSGGDDSSKENKEVNSSGEDSQQQLKRKGRVASKQKWVPLDIE
TKRRSRSHGRVNPRESRRGGKDDKVGADSKNWREDMRPPSPREGRGFRGYGFRGRGRGRG
RGRGGRGRGMEQTVENLTGQDFKYSYDGEQFYADPASVSPTAGVSSSGFGTVYFNNPYTA
DETTLKELIKKQIEYYFSDENLQRDFFLRRRMDPEGLIPISLIASFHRVQALTQDVNLII
KALKESETLEVSADNLKVRGKVQPTKWPLQGPVGMTVTSNLHADVPEFVPGKAYAFHPDD
SGISHDADDIHDNGGGIRSFMDDLTDYDPIGHSILSSSAPELHGEWMEVKRKVRLAKKKE
EKDSEADVSTKGDEKEELDFMFDEEMDGLEVGRRNHFSEWSDEDSDYEITDQDVNKILIV
TQTPPAMKRHPQGDRTGDFISRAKMTANMTKVINDGLFYYEQDLQETLETDFGQFRTVNV
ISQEEFQSIIPFVSTPNQQVPPPPPVTLQSTAKKVPTPPVNDANGAVLAQSLPTNVPNTP
GRRDTGPRTPRSRADDKTPRFYPVMKDSMRVPDPQTPRKKKTRHSSNPPIESHVGWVMDA
REHHPSRSRNNSMSQSPTDSQLASAFGSYGSTPHAFPNFHHPSHELLKDNGFVWHVYHKY
HSKCLKDRKKLGAGLSPEMNTMFRFWSFFLRQHFNKKMYTEFHQYAVEDAAAGYRYGLEC
LFRFYSYGLEKRFRPDLYQDFQQETIRDYENGQLYGLEKFWAFLKYSRRQVDVDPKVRLW
LSKYKRLEDFRIEMFADQEGGRQRHTSTSSNRERHMPGSQRERHASGSKSAKVNVSLKQQ
QQKTKETRRERTVSDSQSVQKSRYGGSAKKDNRSVTPLQDRKPRPDSAQSSNQGKQSQGK
QDKADSVKKDDKPDSPKPLQNKEKSDQSKTSGKTDQSKPDSQARKDQSKQDTHSKKDYPK
SSGSVKQETRPRSGHGRTDRTAKSSPSPVSKPGPNQSNQNSKPAPSQKPQQSNSKTTKST
DAQPTSQAKTSKPESKSSPQRKIPASGGTSQAQTLAKDMPTADRSSEKNSSAGEKQAS
NT seq 3777 nt   +upstreamnt  +downstreamnt
atggcggctgttagtgttggtaatgccaccacctcaaatgagagttttcactcagaaaag
aacactgtcactcgtcaaagcagtgatccagagttagagcgacccaatccttggaaaaag
aaggaaactgtgccttctgaacccattgaaaaagtgaaagaagtgcccccagcagcagac
cccttgaaggaagaaggagaaaccaagggagagaaaggggaaaaggaggcaaaggagctg
aaagtaaagaagtttgataacaagacttatgtggaggcaccattacccaaaaccaaccct
tggaataagggaaagaaaaacccagctggtcctgcctcaccgaaagcagctgctgcaaaa
cccccaattgtggaaccagaacctgttgatgtccccaaacaaaaaccagtccagccggat
gtggaagtagttaaagaaaaaacagaaaaggcgtcggcacctctaagtgatgaaaattgg
ccagcacttacggaagtaaccgaggttttggttccaaagaaatcaattgccatgaaatcg
accactggtcaacagactccacaaaccaatggccctcaacaggtttcttctgattcaggg
ggagatgactcctccaaggaaaacaaggaagtgaactcttctggcgaggactcacaacag
cagttaaagaggaaaggcagagttgcctcgaaacagaagtgggtgccattagacatagag
acaaagagaaggagtcgaagtcatggccgtgtgaatcctagagaatccagaagaggagga
aaagatgacaaagtaggtgcagacagcaaaaactggagggaagacatgagaccacccagc
ccaagggaagggcgaggtttccgtggatatggatttcgaggtcggggtagaggtcgtggt
aggggtaggggtggcaggggaagaggaatggagcagacagtagagaatttgacaggacaa
gattttaagtattcctatgatggcgagcagttttatgctgacccagcatctgtcagtccc
acagctggggtctcttcctctggatttggaactgtctatttcaataatccctacactgct
gatgaaactacactcaaagaattaattaagaaacaaattgagtactacttcagcgatgag
aatttgcagcgtgactttttcttgagacgaaggatggatcctgaggggctgattcccatc
agtcttattgccagcttccatcgagttcaggctctcacacaagatgtcaaccttatcatt
aaggccctgaaggaaagtgagacattagaggtgtcagcagacaatttgaaagtcagagga
aaggtacaaccaacaaaatggccactgcagggtcctgtaggaatgaccgttacgtctaac
cttcacgctgatgttcccgagtttgtccctggcaaggcttatgcatttcatccggacgac
agtggaatctctcacgatgctgacgatatccatgacaatgggggtgggatcaggtcattt
atggatgacctgacggactacgatcctattggacattcaattttatcctccagcgctcca
gaattacatggagaatggatggaggttaaacggaaagtgcgacttgccaagaagaaagag
gaaaaagatagcgaagctgatgtgtctacaaaaggagacgagaaagaggaattagatttt
atgtttgatgaagaaatggatgggctagaagtgggtcgcagaaatcacttttcagaatgg
tctgatgaagattcagattatgaaatcacagaccaggatgtcaacaagattttgatagtt
acacagaccccacctgccatgaaaaggcacccccagggggatcgtactggagactttatc
agtcgagccaaaatgacagccaacatgactaaggtcattaatgatggtctcttctactat
gaacaggatctccaagagactttggagacggactttggtcagtttcgtacagtcaatgtt
atatctcaggaagaatttcaaagtattatcccctttgtctctactccaaaccaacaggtg
ccccctcctcctccggtcacattacagtcaactgccaagaaagtacctactccccctgta
aatgatgctaacggtgcagtgctagcccagtctctgccaactaacgttcccaacaccccc
ggcagacgagacaccggtccacgaacaccccgcagtagagcagatgataagactcccagg
ttttacccagtcatgaaggattctatgcgtgttccagacccacagactcctagaaagaag
aaaaccagacacagcagtaatcctcccattgagagccatgtaggttgggtgatggatgcc
agggaacaccatccatctcgatctcgaaataactctatgtctcagagcccaactgatagt
caactggcatcagcttttggcagctatggtagtaccccacatgcatttccaaacttccat
catccttctcatgagcttctgaaagataatggatttgtgtggcatgtgtaccacaaatat
cattccaaatgtctgaaagaccgtaagaaattaggtgcaggcctttcacctgagatgaac
actatgtttcgcttttggtcctttttccttcgacaacatttcaacaaaaagatgtacacc
gagtttcaccagtatgctgtggaagatgcagctgctggctacaggtatggcctggagtgt
ctatttcgattctacagttatggtctagagaagagattcaggccagatttatatcaagat
tttcaacaggagacgatacgagactacgagaatggtcagttgtatggtctcgagaaattc
tgggcttttctaaagtattccaggagacaggtagatgttgatccaaaagtacgactctgg
ttatcaaagtacaaacgcctagaagacttcagaattgagatgtttgctgatcaggaaggg
ggtcgccagagacacacaagtacctccagcaatcgtgagcgccatatgcctggctcccag
agggaaaggcatgcatcgggttccaaaagtgccaaagtaaatgtaagccttaaacaacaa
cagcagaaaaccaaggagacccgtcgtgaaagaacagtgtcggactctcagtcagttcag
aagtcgaggtacggtggctcagccaagaaagacaacagatcggtgaccccactgcaggac
agaaaaccaaggcctgattctgcacagtcttccaaccaggggaaacaatcacaaggaaaa
caggacaaagcagattctgtgaaaaaggacgataaaccagattctcctaaaccattacaa
aacaaggagaaaagtgatcagtctaaaacatcagggaaaactgaccagtcaaaaccagat
agtcaagctaggaaagaccagtctaaacaggacactcattcaaaaaaagattaccccaag
tcatctgggagtgtgaaacaggagacacgacctagatcaggtcacgggaggacagataga
actgccaagtcatcgccatcaccagtgtccaaaccgggcccaaaccagtccaaccagaac
tcaaagcctgcaccatcacagaaaccacagcagtcaaacagtaaaaccactaagtcaact
gatgctcaaccaacttctcaagccaaaacttcaaaaccagaatccaagtcgtcaccacag
cgtaaaattcccgcttcaggtggtaccagtcaagctcaaaccctggcaaaagacatgcct
actgctgatagaagcagtgagaaaaactcatcagccggtgaaaagcaggcatcatga

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