Ostrea edulis (European flat oyster): 125679358
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Entry
125679358 CDS
T09123
Name
(RefSeq) laminin subunit gamma-1-like
KO
K05635
laminin, gamma 1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125679358
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
Laminin_EGF
Laminin_B
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
125679358
NCBI-ProteinID:
XP_048774484
LinkDB
All DBs
Position
2:44993832..45054858
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AA seq
1645 aa
AA seq
DB search
MAADGKKMRSVHWSSLTDCKMCKLAVIVFCLGSLPHISYGQNEIENLPSSACYNAQGIAQ
RCMPVFVNAAFSKTVEATNTCGLTNPTEYCLQTGVTGVRKQCQTCDVKRPGYSHPPEFMT
DFNNNHNWTWWQSDTMLEGIQYPIVVNLTLSLNKAYDVTYVRLRFRSPRPESFAIYKKTT
EDGEWIPYQFYSASCGRTYGKERRGIITVDNEGEAICTEEYSDISPLTGGSVPFSTLEGR
PSAFDFESSPLLQEWVTATTIRISLTRMNTFGDEVFGDARVLKSYFYAISDLSVGARCKC
NGHAQECYPRQGPGPTFERREICRCQHNTDGPDCEKCLPMYNDKPWARATETSANECKRC
ECNNKADRCYFDENLYQRTGRGGHCIDCRDNTDGPHCERCKDNHFLKPDDRRCTACECNS
EGSETLQCDAAGRCQCKPGVAGDKCDRCENNYYDFGDAGCRPCGCNSIGSQDNFARCNPV
DGTCMCKENVDGRTCDRCKLGYFALREDDPKGCIPCFCFGHSSDCSSALGYYATSIISDF
ETGKQRWTAADRANNMIETQYNGVSQSLGVSSPGQEQIYFVAPARYLGDQRFSYNQHLYF
DLRIGEDDSRPSVIDIIFEGAGQRFSSAIFVQGNDKPSVQTKTFKYRLNERQESQWVPRL
NSQAFISILANLTGLKVRATYNNQGVGFIDNIKLDTARAGSNGGDPATWVEQCTCPEGFV
GQFCESCAGGYKRDPPNSGPFSSCVPCQCFGHSDSCDPDSGRCICQHNTEGNFCEKCVPG
YYGNPKNGSEYDCKPCPCPDGGPCIQLHNGDVVCTACNDGHGGNLCDICLDGYYGNPVGG
SGIHQDYKACQKCSCNDNIDPNAIHNCESKTGECLKCIYNTDGFYCEKCLPNYYGDALAM
PKGNCTACNCYPPGTLVINELSCDSKTGQCTCQDHVVGRQCDTCEPGYWNINTGTGCESC
NCDGTGSLNDVCNQATGQCQCRPGVTGLKCDQCQPYHYGFSNTGCTACNCDPEGSMSLQC
DRYGNCPCRTNIEGQHCDRCMENKYNITAGCIDCPPCYRLVQTQVNIHRGKLQDLENLIV
NIGNNPAAFNDTQFLAYMNQVNDSVVMLLDEARGAISDDGSLGKQLSELRTAIRDVMIKS
NEITNNIRSAESMARNSLTDIDSAKEAISRADAALQAAEQYIDTQGREALQKAEDALKQH
GVQSKQMTEIANEAKLEAERQRKEAERIEMLAKNALNTSLEAKRLAEETLAMPDKAEKEI
QMLRQKYSEADTLYNQTKAMADKAKERAKEAYKVALKLYTEATSIQLPAFDLNLLDSNTE
RIKNTAANIKREAQKLMQDNAKLLNDTINQRSEAEGLLKSGIKSQQKVDELLAEVDVART
MAREAVSRAEKTLAEANETLQILLGFNKQVEDSKGKAEDAIKKIPDIENLIKRAENKTQE
ARDSLSGAESDANEALSLAQLAQVTAINASDEASRIRLDAETTKVRSTSLKDQADMLSDE
LTNTELDLSKYENQAMRDAQRAGEALGKADEAKNTAKKVSDDVTKALETVTNISTLLGQL
VNVDVNKLDDLEQELDDAEKELMGTDLQEQYNRLETANDKILQLVAQYEDDLTYLRKEVD
NIQEIKESLPDGCFKNIGIENPGSQ
NT seq
4938 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggacgggaaaaagatgaggtctgtacactggtcgagtttgacggattgtaaa
atgtgtaaactagctgtgattgtgttttgtctcggatctctacctcacatctcatatgga
caaaatgaaatagaaaatttaccaagttcagcttgttacaatgcacagggtatcgctcag
cggtgtatgccagtttttgtgaatgctgcctttagtaaaactgttgaggccactaatacc
tgtggtctgactaatcccaccgaatactgtctacagacaggagtcacgggtgtcagaaag
cagtgccaaacctgtgatgtgaagaggccggggtacagccacccccccgagtttatgacg
gattttaataacaatcataactggacatggtggcagtcggacaccatgttggaggggatt
cagtacccaatagtagtcaacttgactcttagtttaaataaagcatatgatgtaacctat
gttagactgcgtttccgttccccaagaccagaaagttttgccatctacaagaaaacaaca
gaagatggtgaatggattccatatcagttttacagtgcttcttgtggaaggacctatgga
aaggaacgtcggggtatcattacggtggataatgaaggggaggccatctgtacagaggag
tacagtgacatttcgcccctgaccgggggaagtgtaccattcagtacattggagggacgg
cctagtgcttttgactttgagagcagtcctctattgcaggaatgggtaacagccaccacc
attcgtatctccctgacacgcatgaatacttttggtgatgaggtgtttggtgatgccaga
gtcttgaaatcctacttctatgccatctcagatttgtcagttggggcaaggtgtaaatgt
aatggccatgctcaggagtgttacccacgacagggtccaggcccaacttttgagaggaga
gaaatctgtaggtgtcagcacaacacagacggacctgactgtgaaaagtgtctccccatg
tacaatgataaaccatgggccagggccacagagaccagtgctaatgaatgcaaacgttgt
gagtgcaacaacaaggcagaccgctgctactttgacgagaacctctaccagagaactggc
aggggaggtcactgtattgactgtcgggacaacactgacggaccacattgtgaaagatgc
aaggacaatcacttcctcaagccagatgacaggagatgtactgcctgtgaatgtaactct
gagggttctgagacattgcagtgtgatgccgctggccgttgtcaatgtaaaccaggagtt
gctggggataagtgtgacaggtgtgaaaacaactactatgactttggagatgctggatgc
aggccatgtggatgcaactccattggaagccaggacaactttgccaggtgtaatcctgtg
gatggaacatgtatgtgtaaggagaatgtggatggtcgcacctgtgacagatgcaagctt
ggttacttcgctcttcgagaggatgatcccaagggatgtatcccctgcttttgttttggt
cactcatctgattgttcaagtgccttgggatactatgctaccagtattatctctgacttc
gaaacaggaaagcagagatggactgctgctgatagagctaacaatatgatagagacccag
tataatggtgtatcccagagcttaggggtgtcttctccaggccaagaacaaatatacttt
gtagcaccagctcgttacctgggtgatcagagattcagctataaccaacacctttacttt
gacctgagaatcggtgaagacgactctagaccctcagtcattgacatcatttttgaggga
gctggtcaaaggttttcctcagctatttttgtccaaggaaatgacaagccatcagtacaa
accaagacctttaagtacaggttgaatgagaggcaggaatctcagtgggtgccaaggttg
aactctcaggcttttatatctatattggctaacttgactgggcttaaagtcagggctacc
tacaacaatcagggtgttggtttcattgacaacattaagttggacactgccagagctgga
tcaaatggaggagatcccgctacgtgggtggaacagtgcacctgtcccgagggatttgtg
ggacagttttgtgaatcctgtgcaggaggatacaagagagatcctcccaacagtggccca
ttttcatcctgtgtaccttgccaatgttttggacactcagacagctgtgatccagattca
ggaagatgtatctgtcagcacaacacagagggaaatttctgtgagaaatgtgtccccggt
tactatggtaaccccaaaaatggctctgaatatgactgcaagccctgtccatgtcctgat
ggaggtccctgtattcaacttcataatggagatgttgtatgtacagcctgtaatgatggc
catgggggaaatctttgtgatatttgtttggatggttactatggaaatcctgtgggagga
tctggaatccatcaggattataaagcttgtcaaaaatgttcctgtaacgacaacattgac
cctaatgccatccacaactgtgaatctaaaactggagaatgcttaaaatgcatctacaat
actgatgggttttactgtgaaaagtgtttgcctaattactatggtgatgccttggccatg
ccaaaaggaaactgcacagcctgtaactgctacccccctggaactctggtgatcaatgaa
ctgtcgtgcgactcgaagaccggacagtgcacctgtcaggatcatgtggtagggagacag
tgtgacacttgtgaaccaggctactggaacatcaacacagggacaggttgtgagagctgt
aactgtgatggaacagggtctttaaatgatgtttgtaatcaggccacaggacagtgtcag
tgtcgcccaggtgtgacgggactcaagtgtgaccagtgccagccttaccactatggattc
tctaacactggatgcacagcctgtaactgtgaccctgagggttcaatgagcctacagtgt
gacagatatggtaactgtccttgtcgaaccaacattgagggacagcactgtgacaggtgt
atggagaacaagtacaacatcacagctgggtgtatagactgcccaccttgctatagacta
gtacaaactcaggtcaacattcacagagggaaactgcaagatttggaaaatttaattgtg
aacatcggtaacaatcctgctgcatttaacgacacccagttcctggcatacatgaatcag
gtcaatgactctgtcgtcatgttgctagacgaggcccggggagctatcagtgatgatggg
tcattgggcaaacagttgtctgaactgagaactgctatcagagatgtgatgatcaagtcc
aatgaaatcaccaataatattagaagtgctgagtcgatggcccgtaacagcctgactgat
atagacagtgccaaggaagcaattagtcgagctgatgctgccctgcaggcagcagagcag
tatatagacacccagggaagagaggcattgcagaaggctgaggatgcattgaagcagcat
ggtgtgcagtctaaacagatgacggagattgcaaatgaagccaaattagaagccgagagg
caaagaaaagaagctgagaggatagaaatgttagccaagaatgccttgaatacttctctt
gaagcaaaacgtctagctgaagagactttggctatgcctgataaagcagaaaaggaaatc
caaatgttaagacagaaatattctgaagctgataccttatacaaccagacaaaggcaatg
gcagacaaggccaaagaaagggccaaggaagcatacaaggtggccctgaaactgtacaca
gaagccacctccatacaactcccagcctttgatcttaacctgctggatagcaacacggag
agaattaagaacactgctgcaaacatcaagagggaggctcaaaagttaatgcaggacaat
gccaagctgctgaatgacaccattaatcagaggtcagaagctgaaggattactgaaatct
ggaattaaaagccagcagaaagtggatgagttgctggcagaagtagatgtggcgagaact
atggcaagagaagcagtatcaagagctgagaagacattagcagaagccaatgaaaccctg
cagattttattaggatttaacaaacaagttgaagacagcaagggtaaggctgaggatgcc
ataaagaaaattccagacattgagaacctaatcaagcgagctgagaacaaaacccaggag
gcccgagattctctcagtggggcggagtctgatgctaatgaagcactttcattggctcag
cttgctcaagtcacagctatcaatgcttctgatgaggctagcagaattcgtttggatgca
gaaacaaccaaagtcaggtcaaccagtcttaaagatcaagcagatatgctctctgatgaa
ctgacaaatactgagctagatttgagtaaatatgaaaatcaagctatgagagatgcacag
cgagcaggagaggctcttggaaaagcagatgaagccaaaaatacagctaagaaagtgtct
gatgacgttactaaagcactagagacagttaccaatatttcaactctattaggtcagtta
gtcaatgtggatgttaataagcttgatgatcttgaacaagaacttgatgatgcagaaaaa
gaattaatgggaactgatctgcaagagcaatacaatcgtttagaaacagccaatgacaaa
atcttgcaactagtagcacagtatgaagatgatttgacatatttgaggaaagaagtggac
aatatacaagaaatcaaagaatctctaccagatgggtgtttcaagaacataggaattgaa
aaccctggttctcagtag
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