Ostrea edulis (European flat oyster): 125679732
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Entry
125679732 CDS
T09123
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog isoform X1
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oed03041
]
125679732
Spliceosome [BR:
oed03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
125679732
Complex C
U4/U6.U5 tri-SnRNP related factors
125679732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MA3
MIF4G
PRP38
Motif
Other DBs
NCBI-GeneID:
125679732
NCBI-ProteinID:
XP_056012528
LinkDB
All DBs
Position
2:complement(27407271..27431174)
Genome browser
AA seq
1552 aa
AA seq
DB search
MPRSEDSEKRKRRKSSESSSSSSSSSSSNSDSDSSSTSSSSSEDRGEDKGRPEKDRSRQS
PSEDRREDKRRPEKDRSRQSSLSKDTRGHRGRRDSFNSDEDSVKKRTRSPKDERSRSHSS
LSRRSRSPSGKPRLSPADSRSNSKSGQNASSRHSSTGRSTSRSSSRHGQQDRPSSSKGSH
LEIRREDVTRSSSRGSQKEGKKSEKQARTPSSSPPPQRNERKEKIARTPSSSPPRRKEDD
KRQERLRHSSPPQRSEKIRPIDASPDVRQSSDRKSQRRQSSNSDSPSHTPPRKDRYDISK
YQAESGASESEDDTKSRKKKHDMRNFESEPESGECTDSEDDKKIKSAVRRKMEEEDRYRR
RRQNEYSMDDRRSNRDVRRRRYSPDRNRRNDRYRDDRQWDRRRSPDRRRNDQGRGSVDRK
RGDDFRKSQAQNERKKEEDSKDKAADSGPRDGEKVENTAKISKEAEVMSLTTRTGGAYIP
PARLRAMQASITDKSSEAYQRIAWEALKKSINGLINKVNVSNLQFVVQELFQENIVRGRG
LVSRSIIQAQTASPTFTHVYAALVAIVNTKFPQIGELILRRLVIQFRRGFKRNDKTLCLS
STQFIAHLVNQQVAHEVLALEILTLLLETPTDDSVEVAVGFLKECGHKLTEVTPRGITAI
FERLRNVLHEGSIDIRVQYMVEVMFAIRKDGFKDHQSVVEDLDLVAEEDQFTHLLTLEDE
GKAEEILNVFKVDPEYEANEEKYKELKRDILDEGSSDEESGSGSGSESDSEDEGEEGEEG
EKQTIIDQTETNLIALRRTIYLTIQSALDFEECAHKLLKLELKPGQEVELCNMILDCCAQ
QRTYEKFFGLLAQRFCMIDKKYIEPFQNMFKEQYDTVHRLETNKLRNVAKFFSHLLHTDA
ISWEVLEIIRLNEDDTTSASRIFIKVLFQELSEYLGLPKLNDRLKDPTLQPYFEGLLPRD
NPKNTRFSINFFTTIGLGGLTDDLREHLINVKKEVAQQQQQEGSSSSSSSSSDSSSDSSS
SDSSSSSSDSSSESSSEDEAPRKKRKDVAAKTRSGEKSRKDYTNGDIQQREKRRGGEEST
ENVRSKKRDREESPENMRSKRRGREDSTENVRSKRYKEESPDNARSKRRDREDSPDNARS
KRRDREDSPDNVRSKRRDREENTKTVRSKRDQEDSPENAWSKRRGREGSPQNGRSRRREQ
QESPENTGSKWEDSKSDRLNDRYSNDVNEKWRDRENDRRRNRDESDDNRAIKYNDRRRER
GNEEEDYDRRSKARQRRVDEEQHNNRRGESPDDNYRGNYRPREEQSRESKRKQDPRENGY
RGRSPEKERDRMSRNRPRSPENDREQSRNNRWREESREERNQRYREPERNRRPEEEDQRR
RYKDNIERSGRSYEKDGSGEKRPRRDDREATRVDRKREVDGERERLNKHRDTEKRRRGSD
EEEEEERRKYTEEEEKSKRNKGSSRRSEESSSEDSDSSSDSDSSSSEDSSSDSSEDSSPS
PPRKRKHSDSESDSVRESVKKRRDSFEHEDRRDSRQYSSQRNIRGRERDHRR
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atgcccagaagtgaagattccgagaagaggaagaggagaaaatcgtcggagagtagttct
agtagttcctcttcgagttcctccaactctgatagcgactcgagttccacctccagcagc
tcctcagaagacagaggggaagacaaaggccgtcctgagaaggatagaagcaggcagtct
ccttcagaagacagaagggaagacaaacgccgtcctgagaaggatagaagcaggcagtct
tccctctccaaagacactcgtggacacagaggcaggcgagacagtttcaactcggatgag
gactctgtgaaaaagaggacaagaagtccaaaggatgagagatccagatcacattccagt
ttatctagacgatccagatcaccaagtggaaaaccaagactctctcctgcagactcaaga
tcaaattccaaaagtggtcaaaatgcatcatcaagacattcttccacaggtcgatctaca
tctcggtcttcgtccagacatggacaacaggatcggccatcatcgtcaaaaggatctcat
ctggagattcgcagagaagatgtaacgcgatcatcctctagaggttcacagaaagaggga
aagaaatctgaaaagcaggccaggaccccgtcatcaagccctccacctcaaaggaatgaa
agaaaagaaaaaattgcacggactccgtcttcaagcccacctagaagaaaagaagatgat
aaaagacaggagagattgcgtcactccagtcctcctcaaagaagtgaaaagattaggcct
atagatgcatcaccagatgtgaggcagtcttcagacagaaaatctcagagaaggcagtcg
tccaactcggattcaccaagccacacccctccaaggaaagatagatatgacatctcgaag
taccaggcagagagtggtgcctcagagtcggaagatgacaccaagagtcgtaaaaagaaa
cacgacatgcggaatttcgagagtgaacccgagagtggggaatgtactgattcagaagat
gacaagaagataaaaagtgcagtcaggaggaagatggaggaagaggatagatatcgccgg
agacgtcaaaatgaatactccatggacgacagacggagcaatagagacgtcaggcgccgt
agatacagtccagacagaaacagaaggaatgatcgttacagagatgatagacagtgggat
cgcaggcgatcacctgatagaagaagaaacgatcaaggtcgcggttcagtggacagaaag
agaggtgatgatttccggaaatcccaagctcaaaatgaacgaaaaaaggaggaggacagc
aaagacaaagcagcagacagtgggccgagagatggagagaaggtggagaacactgccaaa
atatcaaaggaagcggaagtgatgtcactaacaacaagaaccggaggggcgtacattcct
cccgctcgactgagggccatgcaagccagcattaccgataagtcaagtgaagcatatcag
agaattgcatgggaagccctgaagaaaagcatcaatggtttgataaacaaagtcaatgtt
tccaaccttcagtttgtggtccaagaattgttccaggagaacattgttcggggaagagga
ctggtgtcccgttcgatcatacaagcccagactgcctcgcccaccttcactcatgtgtac
gctgcattggtggctattgtcaacaccaaatttccacaaataggggagctcattttgcga
cgtcttgtgattcagttccggcgtggctttaagcgaaatgacaagaccctctgtctctcc
tccactcagttcattgctcatctagtgaaccagcaagtggcccacgaggtgctggcatta
gaaattcttacgctgttactggagacccccactgatgattcggtggaagtggctgtgggg
tttctaaaggagtgtggacataaactgaccgaggtcacacccaggggaatcacagccata
tttgagagattgagaaatgtgttacacgaggggagtatcgatattcgagtccagtatatg
gtggaagtaatgtttgcaattcgtaaggatggctttaaggaccaccagtctgttgttgag
gacctggacctagttgcagaggaggaccagtttactcaccttctgacgttggaagatgag
ggaaaagcagaagaaatcctcaatgtgttcaaggttgatcctgaatacgaagctaatgaa
gaaaagtataaagaactgaaaagggatattttggatgaaggcagttctgatgaggagtca
ggaagcggttctggctcggagagtgacagcgaagatgagggggaggagggtgaagaagga
gagaaacaaactattattgaccaaacggaaaccaatctgatcgcactgagaagaacaatt
tatctaacaatccagagtgccttagactttgaggaatgtgctcacaaacttctgaagttg
gaactgaaacctggacaagaggttgagctctgcaacatgattcttgactgctgcgctcag
caaagaacgtatgagaagttttttggactgcttgctcagcggttctgtatgattgacaag
aagtatatcgagccattccagaacatgttcaaggaacagtacgacactgtacacagactg
gaaacaaacaaactcaggaatgtcgccaagttcttttctcatctgctgcacacagacgcc
atttcatgggaggttctggagatcatcagattaaacgaggatgacacgacctcagccagc
cgaatcttcatcaaagtattatttcaggaattgtccgagtaccttggtttaccaaaactc
aatgacagactcaaagatccgactctccagccctactttgaggggttgctgcccagggac
aacccaaaaaacacccggttctccatcaacttcttcaccaccattggtcttggtgggctg
actgatgatctcagagagcacttaatcaatgtgaaaaaagaagtagctcaacagcagcag
caggaggggagctcttcttcctcctcctcctcatctgattcctcatctgactcctcatcc
tcagacagcagtagttcctcatcagatagctcctcagagagctcctcagaagatgaggca
ccgaggaagaaaagaaaagatgtagcagccaagactaggagtggagagaaatccaggaaa
gactacactaatggggacatacaacagagggagaaaaggagagggggagaggaaagtaca
gagaatgtgcggtcgaaaaaaagggatagagaagagagtccagaaaatatgcgatcaaaa
cggaggggcagggaggacagtacggagaatgttcggtcaaaaagatacaaggaagagagt
ccagataatgcccggtcaaaaaggagagacagagaggacagtccagataatgcccggtca
aagaggagagacagagaggacagtccagataatgtccggtcaaagaggagagacagagag
gaaaataccaagactgtccgctcaaaaagagaccaggaagatagtccagaaaatgcgtgg
tcaaaacggagaggaagggagggaagtccacagaatgggcgatctagaaggcgagagcaa
caggagagtccggaaaacacaggatccaagtgggaagactccaaatctgatagacttaat
gacaggtattctaatgatgttaatgaaaaatggagagaccgagagaatgacagaaggaga
aacagagatgaaagtgatgacaacagagctatcaagtataatgataggaggagagagaga
ggaaatgaagaggaggattacgacagacgatcaaaggcgaggcaaagacgagtagatgag
gagcaacataataatagacggggagaaagtcctgatgacaattacagaggaaattatcga
ccaagagaggaacagagcagggagtctaaaaggaaacaggatcctagagaaaatggttac
agaggaagaagtccggaaaaagagagagataggatgagtagaaatagaccaagaagtcct
gaaaatgatagagaacaaagtagaaataatcgttggagagaggaatcaagggaagagaga
aatcaaagatacagggagcctgagagaaataggagaccggaggaggaggaccaaaggagg
aggtacaaagacaatatagagagaagtgggcggagttatgagaaagacggtagtggagaa
aagaggccaagacgagatgatagagaggcaacgagagttgacaggaagagagaggtagat
ggagaacgagaaaggttgaataaacacagagatacagagaagagaaggagaggttctgat
gaagaggaggaagaagaaagaaggaaatacacggaagaagaggaaaagagtaagaggaat
aaaggcagcagcagaaggagtgaggaatcgtctagtgaagacagcgattcctccagtgat
tccgattccagcagttcggaggattcgtctagtgacagttcagaggattcctcgccctca
cccccgaggaagaggaagcactcagattcggagagtgacagtgttagagagtcagtgaaa
aaaagacgagactcgtttgaacatgaggacaggcgtgacagtagacagtatagttctcaa
agaaatattcgtggcagggaaagagaccacaggagatga
DBGET
integrated database retrieval system
