Olea europaea var. sylvestris (wild olive): 111367479
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Entry
111367479 CDS
T05244
Name
(RefSeq) serine/arginine-rich SC35-like splicing factor SCL30A
KO
K12900
serine/arginine-rich splicing factor 10
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111367479
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oeu01009
]
111367479
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oeu03041
]
111367479
Protein phosphatases and associated proteins [BR:
oeu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111367479
Spliceosome [BR:
oeu03041
]
Common components
Common spliceosomal components
SR proteins
111367479
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
111367479
NCBI-ProteinID:
XP_022844148
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Position
18:12357462..12361144
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AA seq
267 aa
AA seq
DB search
MRGRSYTPSPPRGYVRRGRSPSPRGRYGGHGRGDGPTSLLVRNLRHDCRPEDLRRPFGQF
GPLKDIYLPRDYYTGQPRGFGFVQYMDPADAAEAKYQMDGQILHGRELTVVFAEENRKKP
TEMRDRERGGRGRVYDRRRSPPRYSRSPVPSYGRSTSRSRDYYSPPPRRRYSRSVSPRER
RYSRERSFSHSPARGRSPPYNGSRSRSRSPVRGLSPYGPRSHNQSPGRAHSPVRTRSRNR
SPSRSRSRSPYPGDYSRDPRNDRSPSQ
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgaggggaaggagctataccccatcaccaccaagaggttatgttagaagaggaaggagt
cccagtccaagaggacgttatggtggtcatggtagaggagatggtccaactagtctttta
gttcgcaaccttcgccatgactgtcggccagaagacctaaggaggccttttggacaattt
ggccctttaaaggacatctatttgccaagggattattacactggtcaaccgcgaggcttc
ggatttgttcagtatatggaccctgcagatgctgctgaagctaaatatcagatggatggt
cagattctgcatggtcgggagcttacagttgtttttgcggaggagaataggaagaagcca
actgaaatgagagatagggaacgtggaggaagaggtcgtgtttatgatcgtaggcggtct
ccccctcgttattctcgatccccagtgccaagctatggaaggtccacatctcgtagccgt
gattactattcgccccctcctagaagaagatactctaggtctgtttccccacgggagaga
agatacagtagagaaaggtcattctcacattcaccagcaaggggacgttctccaccatat
aatggttcaaggagccgcagtcgaagtccagtgagaggcctttcaccttatggccccaga
agccacaatcaaagccctggtagggcccattctccagtgaggactcgaagccggaatcgt
agcccaagccgtagcagaagcaggagcccttatcctggggattactcgagggatccccgc
aatgataggtctcctagccagtga
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