Olea europaea var. sylvestris (wild olive): 111372139
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Entry
111372139 CDS
T05244
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111372139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oeu03019
]
111372139
Messenger RNA biogenesis [BR:
oeu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111372139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
zf-RanBP
MMR_HSR1
GTP_EFTU_D4
Vps36-NZF-N
zinc_ribbon_2
Motif
Other DBs
NCBI-GeneID:
111372139
NCBI-ProteinID:
XP_022850096
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Position
23:4009579..4017989
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AA seq
724 aa
AA seq
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MPLKVNYGVDYNDDYNVYEDDNYHYDDLYEYENEKRDITHQTKAKQEVIRTGAWRCPICT
YDNEDSMSECDICGALRNCLVRISQTGDSTADTFHAGGGRCKSSGASVMAKSLFASFRHR
APAKSVAFEAKNDAVLIEDAFIIRRNFQEFLRAFSSQKHQNINIAAPFKFDSPSPDDLVS
TRLHSSKLDSKANFKRLSSLDMSTREREKNILIESELGTEGPNSSSASVARDGGVKERDF
ASDCGIKPEILVSRMRSVSLSSKSRTGNVNEETGTSNLEYKPEAWMIPDQAEDRLSQLNL
AIVGHVDSGKSTLSGRLLHLLGRISQKEMHRHEKEAKQQGKGSFAYAWALDESAEERERG
ITMTVAVAFFNSRKYHVVLLDSPGHRDFVPNMISGATQADAAILVVDASMGSFEAGLDPI
GGQTREHALLIRSFGVDQIIVVVNKMDVVEYSQERFEMVKQKLGTFLRSCGFKDSSVLWV
PASSMENQNLVATPDERLFSWFHGPCLLDAIDSLQLPARDYSKPLLMPICDIIKSQSQGQ
VSTCGKLVTGAIRTGSKVLIMPSREVATIRSLERDSQACKIARSGDNVTVNLQGIENNHV
TAGGVLCHPDFPVRVSNHLELKILVLDIKIPILSGSQLELHIHHAKEAATVVKILSLLDP
KTGKVTKKSPRCILAKQNAVVEVVLQGSVCVEEYAKSRALGRVSLRSSGRTVALGLVTQI
MKTQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgcctctaaaagtgaattatggggttgattacaatgatgactacaacgtctatgaggat
gataattatcactatgatgatttgtatgaatatgaaaatgaaaaaagagatattacacat
cagacaaaggcaaaacaagaagtcatcaggactggagcatggcgttgccccatttgtaca
tatgataatgaagatagtatgtctgaatgtgacatatgtggggctttacgtaattgtttg
gtcagaattagtcaaactggtgatagcacagcagatactttccatgcaggtggtggcaga
tgcaaaagctctggagcatcagtgatggccaagtctctttttgcatcatttcgacaccgg
gctcctgcaaagtctgtagcctttgaagcaaaaaacgatgctgtcctgatagaagatgct
tttataatccgtcggaattttcaagaattccttagggcctttagctctcaaaagcatcag
aatattaatatagcagcccctttcaagttcgattccccatctcctgatgatttggtgtcc
actagactgcattcctcaaagttggattccaaagccaatttcaaaagattatcatcatta
gatatgtccacaagggaaagagaaaagaatattcttattgaatcagagttgggtaccgaa
gggcccaattcctcatctgcatcagtggcgagggatggcggagtgaaggagagagacttt
gcttcagactgtgggatcaaaccagaaatacttgtcagtcgtatgaggagtgtttctttg
tcttccaaatcgagaacaggaaatgttaacgaggaaacgggcacatctaatttggaatat
aaacccgaggcatggatgataccagatcaagcagaagacagattgagtcaactaaatctt
gcgattgttggccatgttgattctggaaaatcaacactttcaggaaggttacttcatctt
ttgggacggatatcccaaaaagagatgcacaggcatgagaaggaagctaaacaacaggga
aaggggtcctttgcttatgcatgggcattggatgaaagtgccgaagaaagggaaaggggt
ataaccatgactgtggctgttgcttttttcaactctaggaaatatcatgttgttctgctc
gactctcctggccatcgagattttgttccaaacatgatatccggagcaacacaagcagat
gctgccattctggtggtagatgcttcaatgggttcatttgaagcaggcctggatcctatt
ggaggacaaacaagagagcacgcactgctcattagaagctttggagttgatcaaattata
gttgttgttaacaaaatggatgtagtagaatactcccaggaacggtttgaaatggttaag
cagaaacttggaacatttcttcgctcatgtggttttaaagactcttctgtattatgggtc
ccagcaagttctatggaaaaccaaaatttggtggcaactcctgatgagcgattgttctcc
tggtttcatgggccttgtttattggatgcaatagattctcttcaacttcctgcaagagat
tactcaaagccgttactaatgccaatatgtgacattatcaaatcacaatcacaaggtcag
gtgtctacatgcgggaaattggtgactggagctattcgaactggttctaaggttctgatt
atgccttcaagagaagtagcgacaatacgttctctggaacgggattctcaagcttgtaag
attgcaagatccggtgacaatgtcacggtcaatttacagggtattgagaacaatcatgtg
acagctggaggtgtcttatgtcaccctgatttcccagttcgcgtctcaaaccacttggaa
ctgaagattcttgtgcttgatattaagattccaattctaagtggttctcagttggaatta
cacatacaccacgcaaaagaggctgcaacagttgtgaagatattgtcactgctcgatcca
aagactgggaaggttaccaagaagtccccaaggtgtatattagcaaagcaaaacgcagta
gttgaggttgttctacaaggatcggtttgtgtagaggagtacgccaaatccagagctctg
ggacgggtgtcacttagatcatcaggaagaactgttgcgcttggtcttgtaacgcaaata
atgaagacccaataa
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