Olea europaea var. sylvestris (wild olive): 111396353
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Entry
111396353 CDS
T05244
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu04120
Ubiquitin mediated proteolysis
oeu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111396353
04120 Ubiquitin mediated proteolysis
111396353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oeu04121
]
111396353
Enzymes [BR:
oeu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111396353
Ubiquitin system [BR:
oeu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111396353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-RING_5
zf-HC5HC2H
FlxA
Zn-ribbon_8
zf-RING_11
Prok-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
111396353
NCBI-ProteinID:
XP_022878536
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All DBs
Position
6:28641164..28649150
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AA seq
512 aa
AA seq
DB search
MMRLKTYAGLSLIATLAVIYHAFSSRGQFYPAMVYLSTSKINLVLLLNMGLVVMCILWQL
TKKIFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLSMVTTLLLIKALHWLA
QKRVEYIETTPSVPKLSHIRIVSFMGFLLLIDSLFLYNSVKYLIETRKPSVSLFFAFEYM
ILATTTVSTLVKYVFYVSDMLMDGQWEKKAVYTFYLELIRDLLHLTMYMCFFLVIFMNYG
VPLHLIRELYETFRNFKIRVADYIRYRKIASNMNDRFPDATPEELTSSDATCIICREEMI
TAKKLICGHIFHVHCLRSWLERQNTCPTCRALVVPSENGTSVTGSSADIHQQGTSTASTS
HGLVGANANITQQQARLQAAASAASIYEKSFVYPSPNALVWSPGYALPPQTLARQGSTSM
ANSDGQLPGGNVQYGPGLESNLIVSNSQLDAHRKLIEHQIEFLQHQLKLIQTSDAKRTVD
PGTADVKGKGVLSSSSAIPDCSENSESEVIDR
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggcttaaaacttatgccgggcttagcttaatagctacactggcagttatctat
catgcctttagtagtagaggtcaattctatccagcaatggtttatttatcgacttccaag
atcaatctggtgcttcttttgaacatgggtctggttgttatgtgcattttgtggcaatta
accaagaaaatcttccttggatcactgcgagaagcggaagttgaaaggctgaatgagcag
tcatggagggaagtgatggaaatactgtttgcaatcaccattttccgacaggacttctca
gttacatttctctcaatggttaccactctacttttgatcaaggctttgcattggttggct
cagaaaagggttgagtacattgaaacaactccttctgttcctaagctttctcacatccgc
attgtctctttcatgggatttctcctccttatcgacagtctctttctgtacaattctgta
aaatatttgatagaaacccgaaaaccttcagtgtcgctcttctttgcatttgaatacatg
atactggcaacaacaactgtgtcgacgttagtgaaatatgtattctatgttagtgacatg
cttatggatggacaatgggaaaagaaagctgtctacactttttacttggagcttattagg
gacttactgcacttgactatgtacatgtgtttcttcctcgtgatttttatgaactatggt
gtgcctcttcacttgatccgagaactttatgagacatttcgaaacttcaaaattcgtgtg
gctgattacatacgttatcggaagatcgcttctaatatgaatgatcgttttccagatgca
acacctgaagagcttacttcaagtgatgcaacctgcatcatatgtcgtgaggagatgata
acagctaagaaacttatttgcgggcatatttttcatgtgcactgcctgaggtcgtggtta
gaaagacaaaacacgtgtcctacatgcagagcccttgttgtaccatctgaaaatggcact
tctgttactggatcgagcgctgatattcatcagcaaggtacaagcacagccagtacatct
catggcttagtcggtgcaaatgccaatatcactcagcaacaggctagactccaagctgct
gcttctgctgcctcaatttatgaaaagtcttttgtttatccttctccgaacgctctagtc
tggtcacctggatatgctttacctcctcaaaccttagcgcgtcagggctctacgtctatg
gcaaattcagacggacagcttcctggagggaatgtgcagtatgggccagggttggaaagc
aatcttattgtgtcaaattcacaactggatgcacataggaagttaatcgagcaccagatt
gagtttctgcaacaccagctgaagctcatacaaacatcagatgccaagaggaccgtggat
ccaggaacagctgacgtcaagggaaagggagttttatcgtcatcttcagcaattccagac
tgtagtgagaatagtgagtcagaagttatagatagatag
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