Otolemur garnettii (small-eared galago): 100941563
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Entry
100941563 CDS
T07855
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
100941563 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oga03400
]
100941563 (LIG4)
Enzymes [BR:
oga01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
100941563 (LIG4)
DNA repair and recombination proteins [BR:
oga03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
100941563 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
RTT107_BRCT_5
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
100941563
NCBI-ProteinID:
XP_003789666
Ensembl:
ENSOGAG00000032120
LinkDB
All DBs
Position
Unknown
AA seq
912 aa
AA seq
DB search
MAASQTSHTVVASHVPFADLCSTLERIQKSKGREEKIRHFREFLDSWRKFHDALHKNQKN
VTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTGTR
GDAGDFAMIAYFVLRPRCLKKGSLTIQQVNDLLDSVASNNSAKRKDLVKKSLLQLISQSS
ALEQKWLIRMILKDLKLGVSQQTVFSVFHNDAVELHNVSTDLEKVCRQLHDPSVGLSDIS
ITLFSAFKPMLAAIADIERIEKDMKHQSFYIETKLDGERIQMHKDGTVYEYFSRNGYNYT
EQFGASPDKGSLSPFIHNAFKTDVQICILDGEMMAYNPNTQTFMQKGIKFDIKRMVEDSD
LQTCYCVFDVLMVNNKKLAHETLRKRHEILSSILTPIPGRIEIVQKTQAHSKNEVIDALN
EAIDKREEGVMIKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIVGGYWGKGSRGGM
MSHFLCAVAEKPPPGEKPSVFHTLSRVGSGYTMKELYDLGLKLAKHWKPFNKKAPPSSIL
CGTEKPEVYIEPCNSVIVQVKAAEIVPSDMYKTGCTLRFPRIEKIRDDKEWHECMTLDDL
EQLRGKASGKLASKHFFVGIDDEPQEKKRKAAPKIKKVIGVIEHLKAPNLSNINKVSNVF
EDVEFCVMNGTASHPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSNEHD
VVKPAWLLECFKTKTCVPWQPRFMIHMCPSTKEHFAREYDCYGDSYFVDTDLNQLKEVFS
GIRSSNKQTPKEMASVIADLEYRYSWDHSPLSLFRRHTIYLDLYTVINDLSTRTEGTRLA
IKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVANFKAFRRKMKRKFKILKEDWVTDSID
KHELQEENQYLI
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcgcagacttcacatactgttgttgcatctcatgttcctttcgcagattta
tgttcaactttagaacgaatacagaaaagtaaaggacgtgaagaaaaaatcagacacttc
agggaatttttagattcttggagaaaatttcatgatgcccttcataagaaccaaaaaaat
gtgacagactctttttacccagcaatgagactcattcttcctcagctagaaagagagaga
atggcctatggaatcaaggaaacgatgcttgctaagctttatattgaattgcttaatttg
cccagagaaggaaaagatgcccttaaacttttaaattacagaacacccactggaactcgt
ggagatgctggagactttgcaatgattgcatactttgtgttgaggccaagatgtttgaag
aaaggaagtttaactatacagcaagtaaatgaccttttagactctgttgccagcaataat
tctgctaaaagaaaagacctagtaaagaagagtcttcttcaacttataagtcagagttca
gcacttgagcaaaagtggcttatccggatgatcttaaaagatttaaagcttggtgttagt
cagcaaactgtattttctgtttttcataatgatgctgttgagttgcataatgtcagcaca
gacctggaaaaggtctgtaggcaactgcacgatccttctgtaggactcagtgatatttcc
atcactttattttctgcctttaaaccaatgctagctgctatcgcagacattgagcgcatt
gagaaggacatgaaacaccagagtttctacatcgaaaccaagctagatggagagcgtata
cagatgcacaaagatgggactgtatacgaatacttctccagaaatgggtataactatact
gaacagtttggtgcttctccagataaaggttctctttccccattcattcataatgccttc
aaaacagatgtacaaatctgtattcttgatggtgagatgatggcctacaaccctaacaca
caaaccttcatgcaaaagggaattaagtttgatattaaaagaatggtagaagattctgat
ctgcaaacttgttactgtgtttttgatgtattgatggttaataataaaaagctagcacat
gagaccctgagaaaaaggcatgagatccttagcagtattttgaccccaataccaggtaga
atagaaatagtgcagaagacacaagctcacagtaagaacgaggtaattgatgcattgaat
gaagcaattgacaaaagggaagagggagtcatgataaaacatcctctgtccatttacaag
ccagacaaaagaggtgaagggtggttaaaaattaagccagagtatgtcagtggactaatg
gatgaattggacatcttaattgttggaggctattggggaaaaggatcacggggtgggatg
atgtctcattttttgtgtgcagtagcagagaagccccctcctggggaaaagccatctgtg
tttcatacactgtctcgtgttggctctggttacaccatgaaagaactgtatgatctgggt
ttgaaattggccaaacattggaaaccatttaataaaaaagctccaccaagtagcatttta
tgtggaacagagaagccagaagtgtacattgagccttgtaattctgtcattgttcaggtt
aaggcagcagagattgtccccagtgacatgtacaaaactggctgcacgttgcgttttcca
cgaattgaaaagataagagatgacaaggagtggcacgaatgcatgactctggatgacttg
gagcagcttagggggaaagcatctggaaagcttgcctcaaaacacttttttgtaggtatt
gatgatgaaccacaagaaaaaaagcggaaagctgccccaaagataaagaaagtcattgga
gttattgaacatttaaaagcgcctaacctgtctaatattaacaaagtttctaatgtgttt
gaagacgttgagttctgtgttatgaatggaacagccagccatcccaagcctgacctggag
aatagaattgcagaatttgggggttatatagtacaaaatccaggtccagacacgtactgt
gtgattgcagggtctgagaacatcagggtgaagaacatcatttcttcaaatgaacatgat
gtggtcaaacctgcctggcttttggagtgttttaagaccaaaacctgtgtgccgtggcag
cctcgctttatgatccatatgtgtccatccaccaaagaacattttgcccgtgaatacgac
tgctatggtgatagttattttgttgatacagatttgaaccaactgaaggaagtattctca
ggaattagaagttctaataagcagactccgaaagaaatggcttctgtgattgccgattta
gaatatcgatattcctgggaccactctcctctcagtctgtttcggcgccacaccatttat
ttggacttgtataccgttattaatgacttgagtacgagaactgagggaacaagattagct
attaaagccttggagcttcgatttcacggagcaaaagtagtttcttgtttagctgaggga
gtgtctcatgtcatcattggggaggatcatagtcgtgttgcaaattttaaagcttttagg
agaaagatgaaaagaaagtttaaaattcttaaagaagattgggtaactgattcaatagac
aaacatgaattacaggaggaaaatcaatatttgatttga
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