Otolemur garnettii (small-eared galago): 100951428
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Entry
100951428 CDS
T07855
Symbol
COL1A1
Name
(RefSeq) collagen alpha-1(I) chain
KO
K06236
collagen type I alpha
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga04151
PI3K-Akt signaling pathway
oga04510
Focal adhesion
oga04512
ECM-receptor interaction
oga04611
Platelet activation
oga04820
Cytoskeleton in muscle cells
oga04926
Relaxin signaling pathway
oga04933
AGE-RAGE signaling pathway in diabetic complications
oga04974
Protein digestion and absorption
oga05146
Amoebiasis
oga05165
Human papillomavirus infection
oga05205
Proteoglycans in cancer
oga05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100951428 (COL1A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100951428 (COL1A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100951428 (COL1A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100951428 (COL1A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
100951428 (COL1A1)
09152 Endocrine system
04926 Relaxin signaling pathway
100951428 (COL1A1)
09154 Digestive system
04974 Protein digestion and absorption
100951428 (COL1A1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
100951428 (COL1A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100951428 (COL1A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
100951428 (COL1A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
100951428 (COL1A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100951428 (COL1A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oga00536
]
100951428 (COL1A1)
Glycosaminoglycan binding proteins [BR:
oga00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100951428 (COL1A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
100951428
NCBI-ProteinID:
XP_003786538
Ensembl:
ENSOGAG00000024598
UniProt:
H0XLS8
LinkDB
All DBs
Position
Unknown
AA seq
1463 aa
AA seq
DB search
MFSFVDLRLLLLLAATALLTHGQEEGQVEGQDEDIPPVTCVQNGLRYHDRDVWKPEPCRI
CVCDNGKVLCDDVICDESKNCPGVEAPEGECCPVCPEGSESPTDRETAGVEGPKGDTGPR
GPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQMSYGYDEKSAGVSVPGPM
GPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGSAGPMGPRGPPGPPGKNGDDGEAGKPGRP
GERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGAPGPKGEPGSPGENGAPGQM
GPRGLPGERGRPGPSGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAAGAKGEAGPQGAR
GSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQ
GPSGPPGPKGNSGEPGAPGNKGDTGAKGEPGPAGVQGPPGPAGEEGKRGARGEPGPTGLP
GPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLT
GSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVP
GPTGAVGAPGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQ
GVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGGNGAPGNDGAKGDAGAPGAPGSQ
GAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGARGLTGPIGPPGPAGAPGDK
GESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPA
GPAGPAGPPGPVGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPA
GKEGSKGPRGETGPAGRTGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVV
GLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAE
GSPGRDGAPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPSGPAGPVGPA
GARGPAGPQGPRGDKGETGEQGERGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPR
GPPGSAGAAGKDGLNGLPGPIGPPGPRGRTGDAGPVGPAGPPGPPGPPGPPSGGFDFSFL
PQPPQEKAQDSGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRD
LKMCHSNWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTHPSVAQKNWYISKNPKDK
KHVWFGESMTGGFQFEYGGEGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQT
GNLKKALLLQGSNEIEIRAEGNSRFTYSVTVDGCTSHTGAWGKTVIEYKTTKTSRLPIID
VAPLDVGAPDQEFGFDISPVCFL
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggacctccggctcctgctccttttagcggccaccgccctcctgacg
cacggccaagaggaaggccaagtcgagggccaagacgaagacatcccaccagtcacctgc
gtacagaacggcctcaggtaccatgaccgggacgtatggaaacctgagccctgccggatc
tgtgtctgcgacaatggcaaagtgttgtgcgatgacgtgatctgtgatgagagcaagaac
tgcccaggcgtcgaagcccccgagggcgagtgctgtcctgtctgcccggagggctcagag
tcacctactgaccgagaaaccgcaggagtcgagggacccaagggagacactggtccccga
ggcccaaggggaccagcaggccctcctggccgcgatggcatccctggacagcctggactt
cccggacctcccggaccccccggacctcccggaccccctggcctcggaggaaactttgct
ccccagatgtcttatggctatgatgagaaatcagctggagtttctgtgcctggccccatg
ggtccctctggtcctcgtggtctccctggcccccctggtgcacctggtccccaaggcttc
caaggtccccctggtgagcccggcgagcctggatctgcaggtcctatgggtccccgtggc
ccccctggtcctcctggaaagaatggagatgatggagaagctggaaaacctggtcgtcct
ggcgaacgtgggcctcctgggcctcagggtgctcgaggattgcctggaacagctggcctt
cctggaatgaaggggcacagaggtttcagtggtttggatggtgccaagggagatgctggt
gctcctggacccaagggtgagcctggcagccctggtgaaaatggagctcctggtcagatg
ggcccccgtggtctgcctggtgagagaggtcgccctggaccctctggccctgctggtgct
cgtggaaatgatggtgctactggtgctgctggtcccccgggtcccactggtcccgctggt
cctcctggcttccctggtgctgccggtgctaagggtgaagctggtccccaaggagcccga
ggttctgaaggtccccagggtgtgcgtggtgagcccggcccccctggacctgctggtgct
gctggtcctgctggaaaccctggtgctgatggacagcctggtgctaaaggtgccaacggt
gctcctggtattgctggtgcccctggcttccctggtgcccgaggcccctctggaccccag
ggccccagcggccctcctggtcccaagggtaacagcggtgaacccggtgctcccggcaac
aaaggagacactggtgccaagggagagcctggccctgctggtgttcaaggaccccctggc
cctgctggggaagaaggaaagcgaggagcccgaggtgaacctggacctactggcctgcct
ggaccccctggcgagcgcggtggacctggtagccgtggtttccctggcgcagatggtgtt
gctggtcccaagggtcccgctggcgaacgtggttctcctggccctgctggccccaaaggt
tctcctggtgaagctggccgccccggtgaagctggcctgcctggcgccaagggtctgact
ggcagccctggcagccctggtcctgatggcaaaactggaccccctggtcccgctggtcaa
gatggtcgccctggacccccaggaccccctggtgcccgtggtcaggctggtgtgatggga
ttccctggacccaaaggtgctgctggagagcccggcaaagctggagagcgtggtgttccc
ggacccactggcgctgttggtgctcctggcaaagatggagaagctggagctcaaggacct
cccggccctgctggtcccgctggagagagaggtgaacaaggccctgcaggctcccccgga
ttccagggtctccctggtcccgctggtcctcctggtgaagcaggcaaacctggtgaacag
ggtgttcctggagaccttggtgcccccggcccctctggagcaagaggcgagagaggtttc
cctggcgagcgtggtgtgcagggtccccctggtcctgctggtccccgtgggggcaatggc
gctcctggcaatgatggtgctaagggtgatgctggtgcccctggagcccccggtagccag
ggcgcccctggccttcagggaatgcctggtgaacgtggtgcagctggtcttccaggcccc
aagggtgacagaggtgatgctggtcccaaaggtgctgatggttctcctggcaaagatggc
gcccgtggtctgactggccctatcggtcctcctggtcctgctggtgcccctggtgacaag
ggtgaaagtggtcccagcggccctgccggtcccactggagctcgtggtgccccgggagat
cgtggtgagcctggtccccccggccctgctggctttgccggaccccctggtgctgatggt
cagcctggtgctaaaggcgaacccggtgatgctggtgctaaaggcgatgctggccccgct
ggccctgctggccctgctggaccccctggccctgttggtaacgttggtgctcctggaccc
aaaggtgctcgtggcagcgctggtccccctggtgctactggtttccctggtgctgctgga
cgagttggtccccccggcccctctggtaatgctggaccccctggcccccctggccctgct
ggcaaagaaggctccaaaggtccccgtggtgagactggccctgctggacgaactggagaa
gttggtccccctggtcctcccggccctgctggcgagaaaggttcccctggtgctgatggg
cctgctggcgctcctggcactccaggacctcagggtattgctggacaacgtggtgtggtc
ggcctgcccggtcagagaggagaaagaggcttccctggtcttcctggcccctctggtgaa
cccggcaaacaaggtccttctggagcaagtggtgaacgtggtccccctggtcccatgggc
ccccctggattggctggaccccctggtgaatctggacgtgagggagctcctggtgccgag
ggctctcctggacgagatggcgctcctggccctaagggtgaccgtggtgagaccggcccc
gctggaccccctggtgcccctggtgctcctggtgcccctggccctgttggccctgctggc
aagagcggcgatcgtggtgagactggtccttctggtcctgctggtcctgtcggccccgct
ggtgcccgtggccctgctggaccccaaggcccccgtggtgacaagggtgagacaggcgaa
cagggtgaaagaggcataaagggtcaccgtggcttctccggtctccagggtccccctggt
cctcctggctctcctggtgaacaaggcccctctggagcttctggtcctgctggtccccga
ggtccccctggctctgctggtgctgctggcaaagatggactcaacggtctcccaggcccc
attggcccccctggtcctcgtggtcgtactggtgatgctggtcctgttggtcctgccggc
cctcctggaccccctggtccccctggtcctcccagcggtggtttcgacttcagtttcctg
ccccagccacctcaagagaaggctcaggattcaggccgttactaccgggctgatgatgcc
aatgtggtccgtgaccgtgacctcgaggtggacaccactctcaagagcctgagccagcag
attgagaacatccggagccccgaaggcagccgcaagaaccccgcccgcacttgccgtgac
ctcaagatgtgccactccaactggaagagcggagagtattggattgaccccaaccaaggc
tgcaacctggacgccatcaaggtcttctgcaacatggagactggtgagacctgtgtgtac
cccactcatcccagtgtggcccagaagaactggtacatcagcaagaaccccaaggacaag
aagcatgtctggttcggcgagagcatgaccggtggattccagttcgagtacggcggcgag
ggctccgaccctgctgatgtggccatccagctgaccttcctgcgcctgatgtccactgag
gcctcccagaacatcacctaccattgcaagaacagcgtggcctacatggaccagcagacc
ggcaacctcaagaaggccttgctcctccagggctccaacgagatcgagatccgggccgaa
ggcaacagccgcttcacatacagcgtcactgttgatggctgcacgagtcacactggagct
tggggcaagacagtgatcgaatacaaaaccaccaagacctcccgcttgcccatcatcgat
gtggcccccttggatgttggcgccccagaccaggaattcggcttcgacattagccctgtc
tgcttcctgtaa
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integrated database retrieval system