Otolemur garnettii (small-eared galago): 100955279
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Entry
100955279 CDS
T07855
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03030
DNA replication
oga03420
Nucleotide excision repair
oga03430
Mismatch repair
oga03440
Homologous recombination
oga03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100955279 (RPA1)
03420 Nucleotide excision repair
100955279 (RPA1)
03430 Mismatch repair
100955279 (RPA1)
03440 Homologous recombination
100955279 (RPA1)
03460 Fanconi anemia pathway
100955279 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oga03000
]
100955279 (RPA1)
03032 DNA replication proteins [BR:
oga03032
]
100955279 (RPA1)
03400 DNA repair and recombination proteins [BR:
oga03400
]
100955279 (RPA1)
Transcription factors [BR:
oga03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100955279 (RPA1)
DNA replication proteins [BR:
oga03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
100955279 (RPA1)
DNA repair and recombination proteins [BR:
oga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
100955279 (RPA1)
MMR (mismatch excision repair)
100955279 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
100955279 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
IBR
DUF223
Motif
Other DBs
NCBI-GeneID:
100955279
NCBI-ProteinID:
XP_003799138
Ensembl:
ENSOGAG00000005581
UniProt:
H0WSD1
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MVGQLSEGAIAAIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEQQRLSSNCICQINRFIVNTLKDGRRVVILMELEVLKSAEAVGLKIGNPVPYNE
GHGQQQVVPSPATTASPSTSRPQPQNGSLGMGSAVSKSFGASKTFGKPGGMSLPNTSGGT
QAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSVELVDQSGEIRATAFND
QVDKFFPLIEVNKVYYFTKGTLKIANKQFSAVKNDYEMTFSNDTSVMPCEDDHHLPTVQF
DFTGIGDLENKPKDSLVDIIGVCKNYEDATKITVKSTNREVAKRNIYLMDTSGKVVTTTL
WGEDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQ
ALDGVSISDLKSGGVGGSNTNWKTLNEVKSENLGQGDKADYFSSVATVVYLRKENSMYQA
CPTQDCNKKVIDQQNGLYRCEKCDSEFPNFKYRMILSVNIADFQDNQWVTCFQESAEAIL
GQNTAYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLENYNDESRIKATVMDVKPVDYR
EYGRRLMTNIRRNALM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggttggccagctgagcgaaggggccattgcggccataatgcaacagggggacacatcc
ataaaacccatcctccaagtcattaacatccgtcccattaccacagggaatagtccaccc
cgctatcgacttcttatgagtgatggattgaacactctatcctctttcatgttggcaact
cagttgaaccctctagttgagcaacaacgtttgtccagcaactgtatttgccagattaac
cgatttattgttaacactctgaaagatggaaggagagtagttattttgatggagttagaa
gttttgaaatcagctgaagcggttggattaaagattggcaatccagtgccttataatgaa
gggcatgggcagcagcaagtagttccttctccagctacaacagccagtccatcaaccagc
cggccccagccacagaatgggagcttaggaatgggttccgctgtttctaagtcttttggt
gcctctaagacatttggaaaacccggaggtatgagcctcccaaacacttctgggggaaca
caggccaaggtggtgcccattgccagccttactccttaccagtccaagtggactatttgt
gctcgtgttaccaacaaaagtcagatccgtacctggagcaattcccgaggggaagggaag
cttttctctgtagaactagttgatcaaagtggtgaaattagagctacagctttcaatgat
caagtggacaagttctttccccttattgaagtgaacaaggtttattatttcacgaaaggt
acgctgaagattgctaacaaacaattctcagctgttaaaaacgactacgagatgaccttc
agtaatgatacttctgtcatgccctgtgaagatgatcatcatttgcccacagttcagttt
gacttcacagggattggtgatctagagaacaagcccaaagactcccttgtagacataatt
ggggtctgcaagaactatgaagatgccaccaaaatcacagtgaagtctaccaacagagag
gttgctaagagaaatatctatctgatggacacatcagggaaggtggtgactactactctg
tggggagaagatgctgataaatttgatggttctagacagcccgtgatggctatcaaagga
gccagagtttctgattttggtggacggagcctctctgttctatcttcaagcaccatcatt
gtgaatccggacatcccagaggcctataagcttcgtggatggttcgactcagaaggacaa
gccttagatggtgtttccatctctgatctcaagagtggaggagtaggggggagcaacacc
aactggaagactttaaatgaggttaaatcagagaacctgggccaaggtgacaaggccgac
tattttagctctgtggcgacagtggtgtatcttcgcaaagagaactctatgtaccaggcc
tgcccaactcaggactgcaataagaaagtgattgaccaacagaatggattgtaccgctgt
gagaagtgtgacagtgaatttcccaatttcaagtaccgcatgatcctgtcagtaaatatt
gcagattttcaagacaatcagtgggtgacttgtttccaggagtctgctgaagctatcctt
ggacaaaacactgcttatctcggggaattaaaagagaagaatgaacaggcatttgaggaa
gtttttcagaatgccaactttcgatctttcacattcagaatcagagtcaaactagagaac
tacaatgatgagtctcggattaaggccacagtgatggatgtgaagcctgtggactacaga
gaatatgggagaaggctgatgacaaacatccggagaaacgcacttatgtga
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integrated database retrieval system
