KEGG   Oryza glaberrima (African rice): 127773826
Entry
127773826         CDS       T08853                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    127773826
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ogl04121]
    127773826
Enzymes [BR:ogl01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     127773826
Ubiquitin system [BR:ogl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    127773826
SSDB
Motif
Pfam: Sina_TRAF Sina_ZnF Sina_RING zf-C3HC4_2 FAIM1
Other DBs
NCBI-GeneID: 127773826
NCBI-ProteinID: XP_052155971
LinkDB
Position
5:7551871..7557316
AA seq 361 aa
MDMDSVECLSLPDSSMDVDDVDGGGAVHHHHHHHHALPPHLPAGVAVGVGPGGRAFPKVN
VAGVGGGGAAGAAAAGGAVAGGGAPGGGPPATSVHELLECPVCTNSMFPPIHQCQNGHTL
CSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPEIFPYYSKIKHEAQ
CSFRPYNCPYAGSECAVAGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWM
LTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARNYTYSLEVGGNGRKMVWEGT
PRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQTNPDGACIPNLC
S
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggacatggacagcgtggagtgcctctccctcccggactcgtccatggacgtggacgac
gtcgacggcggcggcgcggtgcaccaccaccaccaccaccaccacgccctcccgccccac
ctccccgcgggggtcgccgtcggggtcggccccggggggcgcgcgttccccaaggtgaat
gtcgctggggttggtggtggcggcgccgccggggccgccgcggcggggggagcggtggcc
ggaggtggggcccccggcggcgggcctcccgccaccagcgtgcacgagctgctcgagtgc
cccgtctgcaccaactccatgttcccgcccatccaccagtgccaaaatggacacacttta
tgttcaacatgcaaggctagagtccacaaccggtgccctacctgcagacaagagctcggt
gatattaggtgcttggcactggagaaagtagcagagtcactcgagcttccttgcaagtat
tgttctttaggttgcccagaaatttttccatattacagcaagataaagcatgaagcacag
tgcagcttcaggccatataactgcccttatgctggttctgaatgtgctgtggctggtgat
attcctttccttgttgcacatttgagggacgaccacaaagttgatatgcacagtggctgc
acattcaaccacagatatgtcaaatctaatccacgcgaggttgagaatgcgacctggatg
ctaacagtgttccattgtttcgggcagtatttctgcctgcatttcgaggcgttccagctt
ggaatggcaccagtttatatggccttcctccgtttcatgggggatgagaatgaagcgagg
aactacacctacagcctagaggttggtggtaatggcaggaagatggtgtgggaaggcacc
cctaggagcatccgcgacagccaccggaaggtgcgggacagccatgacggcctcatcatc
cagaggaacatggcactcttcttctccggcggtgacaggaaggagctgaagctgagggtg
accggccgtatctggaaagaacagacgaacccggatggggcctgcataccgaacctttgt
agctga

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