Oryza glaberrima (African rice): 127778963
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Entry
127778963 CDS
T08853
Name
(RefSeq) eukaryotic translation initiation factor 4G
KO
K03260
translation initiation factor 4G
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127778963
03012 Translation factors [BR:
ogl03012
]
127778963
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127778963
mRNA cycle factors
Stress granule specific factors
127778963
Translation factors [BR:
ogl03012
]
Eukaryotic type
Initiation factors
eIF-4
127778963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
127778963
NCBI-ProteinID:
XP_052161575
LinkDB
All DBs
Position
7:19747982..19756004
Genome browser
AA seq
1794 aa
AA seq
DB search
MSQRGDRGEGHARRPGRSSSFGGGHRGGGGVGGAGKGGGGSSGQPPLATNRSFRKSGNGH
GGHQRVVSQPDTHGFQPAPAPTALQTPPLRPPAPQNVPAHVPVPAPRPQHHDPSGARAPT
LPPSSENTANAPPLKGIPHAAPRAPSRISSTSTSQGAPKGEAYNLQFGSFPMNGGTGGST
MQFPARTSSAPPNLDEQKRMQALPEGHKVVPSGLVPQAPKHQQQQQPLQQQKQQPQSQPP
LQQTRKDVFSSNHSSKPINPHIPSQVKSSVHVSPSVPNVAPPRPPVQQIPGMPMSMPFHH
QAPLQFGGHNPQIPPQGVVPNSLQMSMGLHGANAPQVAQQMYIPTIQHHHQLQPPTMMHQ
AAGIPYGPAAHQLTPQMSGMMNVGVAPQFTPQQPNKYVTGPTRKTTTVKITHPDTHEELK
LDKRMDSSGQRGLPSVQQQSQPVSTYGSPMGFYQQNSYNQSTMFYPTTSGVGQVPTVSQG
PRFVSTQTVSYISPSMNTGPGSNKDNLAGSTTSGHSQVTGKPHPAGLHMEKSGVQTVTIS
APPGKSDVNKLKPAEDAVSHRQKDNEAVSGVRKSGENESKASPITEKHPTPVSQPLQALA
ANPETTAAASFVVNSVPGDDGKSKESIQRTGSFKDSNKNATKDTRNLSQEPQSASSAEDL
KVHTSVKDVCCGVSLMESKGVNKESEQTNAASAAPTEMLKAADASSMDRSSARLTSESTE
NVQEVGKSDVAIGDSEKSGITNKVSPDLTKDDISSGSTGNESHEVCTQDLAEQLPVGASN
PDNLDTATSVTDQGQLLKEPSSSVSDENVIMDRLHQSAEKMSDLVDDTVASVASSETLPE
SIIQNANAKGNTSGNQETGSATSSNILNVLPVPHSVASEDPMKPESMLKDQSSTAPAASA
RPVSREKPSVEITRTKFTAGKKKKRKEMLSKADAAGSSDLYNAYKGPEEKVDFIGASESL
DSSSIADHELPDESSEKEVNMGEDEGKKKVELDDWEDAAEMSTPKLERSDSSNQTTEANE
RKRYSRDFLLTLAQSCTNLPVGFQMIEYASVLFPNLAGKSYVVDHPSPGRGADRPASRGD
RRGAVIEDDRWGKSGHLFGSGRDMSMDNGPPTMNHRGAPGVMRNPRGGLINAGPIAPQMS
RSGSDADRWQQKGIFPSPVTPMQVMHKAEKKYVVGKVSDEEEAKQRQLKAILNKLTPQNF
EKLFEKVKEVNIDNVATLTGVISQIFDKALMEPTFCEMYANFCFHLAGALPDFSEDNEKI
TFKRLLLNKCQEEFERGEREEAEADKTEEEGEIKQTKEEREEKRIRARRRMLGNIRLIGE
LYKKRMLTERIMHECIKKLLGNYQNPDEENIEALCKLMSTIGEMIDHAKAKEHMDAYFDI
MLKLSTSQQLSSRVRFMLRDSIDLRKNKWQQRRKVEGPKKIDEVHRDAAQERHAQSSRLA
RGSVVGSGPRRGAAPMDYGPRGSAAALASPSSQQVGHRGMPSHSRGFGTQDIRFEERSPL
DHRTTVLPPRKDEAITLGPQGGLARGMSIRGQPLISNAELSSADSRRMVSGPNGYNSAST
AREEPGSRIPDRSGRIAPNTQFAGPSNRPASQEGRSGNKSYSEDDLREKSISAIREYYSA
KDEKEVALCIEELNAPSFYPSVVSLWVNDSFERKDMERELLTKLFVSLCNSRNNLLSKSH
LTAGLATVLGSLEDALSDAPRAAEYLGRLLARFVVESILSLQEVGTLIEKGGEEPGELVH
HGIGADVLGAVLESIKVEKGDSFLNEAKASSNLKLEDFRPQHLKRSKLDAFMKA
NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcgaggggacaggggcgaggggcacgcgaggagacccggccggtccagcagc
ttcggcggcggccaccgcggaggcggaggagtcggcggcgcgggcaagggcggcgggggc
tcctccggccagcctcccctcgcaactaaccgcagcttcaggaagtccggcaatggccat
ggcgggcaccagagggttgtgagccaacctgatacgcacggcttccagcctgcacctgca
ccgaccgctctgcagacgccgccgctgcgcccgccggcacctcagaatgtgccggcgcat
gtccccgtccccgcaccacgtcctcagcaccatgatccatctggagcgcgagcacccacc
ctaccaccttccagcgagaacacggccaatgcgccaccactgaaaggtattcctcatgcc
gctccaagggcaccatcaaggatttcaagcacgtccacttcacaaggagcaccaaaaggt
gaagcatataatcttcagtttggcagtttcccaatgaatggtggaactggtggtagcaca
atgcaattccctgccaggacaagctcagctcctcctaatttggatgagcaaaaacgcatg
caggccctccctgaaggtcataaggttgtaccttctgggcttgttccacaagctccaaaa
catcagcagcaacagcagccgttgcagcagcagaagcaacagccgcagtcacagccacca
ctgcagcaaacaagaaaggatgtttttagttctaatcattcatcgaaacctatcaaccct
cacattccttcccaagttaagagctctgtgcatgtctcaccatccgtgcccaatgttgca
ccaccaagaccccctgttcagcagatacctgggatgcccatgtccatgccatttcaccac
caggcacccttgcagtttggcggtcacaacccacaaattccaccacagggagttgtgccc
aattcactacaaatgtctatgggattgcatggcgccaacgcaccccaggttgcacagcaa
atgtacatccctaccattcagcaccatcatcaactgcaaccgccaacaatgatgcatcaa
gcagcaggtataccttatggtccagctgctcatcaactcactcctcagatgagtggtatg
atgaatgtgggggtggcacctcagtttactccacaacagccaaataagtatgttacaggt
ccaactcggaagaccaccacagtcaaaattactcatccagatactcatgaagaattgaag
ctcgataagaggatggactcttctgggcaaaggggtttacctagtgtacaacaacaatcc
cagccggtcagtacttatggatctcctatgggcttctaccagcaaaattcgtataaccag
tcaactatgttttaccccacaacctctggtgttggtcaggttcccactgtatcacagggt
cctaggtttgtatccacacaaacagtttcatacatcagcccatcgatgaacacaggtcct
ggcagtaacaaggacaacctagcagggtctacaacatctggacactcccaagtcacaggc
aaaccacacccagctggtttgcacatggagaaatccggggtacaaacggtcacgataagt
gcgccgcctggtaaatcagatgtgaacaagttaaaaccagctgaagatgctgtatcacat
cgacaaaaggataatgaagctgtttctggggtccgtaaatcaggtgaaaatgagagcaaa
gcttcaccgatcacggagaagcatcccacaccagtgagccaacccttacaagctctagct
gcaaatccagaaactacagcagctgcatcttttgttgtgaattctgttcctggagatgat
ggaaaaagcaaagaatctattcaaagaactgggtcatttaaggatagcaataagaacgcc
actaaggacaccaggaatttatcacaagaaccacagtcagcttcatctgctgaagattta
aaggtgcatacttctgtaaaggatgtatgttgtggtgttagtctcatggaatccaagggt
gtgaataaagagtctgaacagaccaacgcagcttccgctgcaccgactgaaatgttaaaa
gctgctgatgcttctagcatggataggagctctgcaagattgacctctgagagcactgag
aatgttcaagaagtaggaaaatctgatgttgctattggtgattctgagaaaagtggaata
actaacaaagtttcaccagatcttacaaaggatgatatttcttctggttcaactgggaat
gaatcacatgaagtttgcacgcaagacttggcggagcaattacctgtgggagcttctaat
cctgataatttagatactgcgacttctgtaactgaccagggacagcttctcaaagaaccc
agctcatcagtatctgatgagaatgttattatggacagattgcatcagagtgctgaaaaa
atgtcagatttggttgatgacactgttgcttctgttgccagttctgaaactttgccagag
tctataattcaaaatgccaatgctaaagggaacacaagtggtaatcaggaaacagggtct
gctacatctagcaatattcttaatgtgttgccggtacctcattcagtggcatcagaggat
ccaatgaaaccagaaagtatgttaaaggatcaatcgagtactgcaccagcagcctctgct
cgaccagtttcaagggaaaaacctagcgtggaaatcaccagaacaaagtttacagctggg
aaaaagaagaaaagaaaagaaatgctttcaaaagctgatgctgccgggagctcagatctt
tataatgcatacaagggacctgaggaaaaagtagatttcattggtgcctcagagagtctt
gatagttcttcaattgctgatcatgagctaccagacgagtcctccgaaaaggaggttaat
atgggtgaggacgagggaaagaaaaaggttgagcttgatgattgggaagacgctgcagaa
atgtctactccaaagttggagaggtctgattccagcaatcaaacaaccgaagctaatgag
aggaagagatattcacgcgattttttgctaactttagcacagagttgtactaatcttcct
gttggtttccagatgattgagtacgccagcgttctgttccctaatttggccggaaagtct
tatgttgttgatcacccaagtcctggaaggggagctgacaggccagcatctcgtggtgat
cgccgtggtgctgtcattgaggatgatagatggggaaagtcgggccatctttttggttct
ggtcgtgatatgtccatggacaatggccctccaactatgaatcaccgtggtgctccagga
gttatgaggaatccacgaggtgggcttattaatgcaggaccgattgcacctcaaatgtct
cgaagtggctctgatgcagatagatggcagcagaagggtatattcccatctcctgttaca
cccatgcaagtaatgcacaaagcagagaaaaaatatgtcgttggcaaagtttctgatgag
gaagaagctaagcagaggcaactgaaggcaatacttaacaaattgacgccacagaatttt
gaaaagctttttgaaaaagttaaagaggtgaacattgacaatgtggcaactcttactggg
gtcatttcacagatatttgacaaagctttgatggaaccaacattctgtgaaatgtacgct
aatttttgtttccatttggctggtgcactgccagattttagtgaggataatgaaaaaatt
acattcaagagattgcttttgaacaaatgtcaggaggaatttgagaggggtgaaagagaa
gaagctgaagcagacaaaactgaggaggaaggtgagattaagcaaactaaagaggaaagg
gaagagaaaagaatccgtgctcgaaggcgcatgcttgggaacattaggttgattggggaa
ttgtacaaaaagaggatgttgacagaacgcatcatgcatgaatgcattaaaaaattgctg
ggaaattatcagaaccctgatgaagagaacattgaagcactgtgcaaattgatgagcaca
attggagagatgatagaccatgcaaaggctaaggagcatatggatgcgtactttgatata
atgctgaagctttcaacaagtcagcaattatcttcccgtgttaggttcatgctgagagat
tcaattgatctcaggaaaaataaatggcagcaaaggcgtaaggtggaaggcccaaagaaa
attgatgaggtgcacagggatgcagctcaggaacgacatgctcagtcgagtaggttagct
cgtggctcagttgttggttctggtccaaggcgaggagctgcacctatggattatggtcct
cgtggctcagcagcagcattggcttctccaagttctcagcaagttggccatagaggaatg
ccttcgcattcccgagggtttggtacccaagatatccggtttgaagaaaggagtcctttg
gaccatagaacaactgtccttcctccgcgtaaggatgaagccatcactcttgggccacaa
ggtggcctagcaaggggtatgtctataagagggcagccactgatatcaaatgccgagctt
tcttctgctgatagtcgcaggatggtatctggtcccaacgggtataattctgcttcgact
gcaagagaggaacctggctcgagaattcctgatcgctctggaagaatagcaccaaataca
cagtttgctggaccatcgaacaggcctgccagccaagagggccgttcagggaataaatca
tactctgaggatgatttaagagagaaatctatttccgccatccgggaatattacagtgca
aaagatgagaaagaggttgctttgtgtattgaggagttgaatgctccaagtttctatccc
tctgtcgtatcactgtgggtaaatgattcttttgagaggaaagatatggaaagagagttg
ttgacaaagcttttcgttagtctttgcaacagtcgaaataatttattgagcaagtctcat
ctcactgcaggacttgcgactgtccttggttcattggaagatgctctaagtgatgctcca
agagctgcagagtatcttggacggcttcttgcaaggtttgtggtagaaagcatattgtcc
ttgcaggaggtcggtacattgattgaaaaaggtggagaagaacctggagagcttgtacat
catggcattggagctgatgtccttggtgctgttctagaatccatcaaagtagaaaagggg
gattcattcttgaatgaggccaaggcaagctccaacctcaagttggaggattttagacca
cagcatctcaagagatcgaagttggatgccttcatgaaagcataa
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