Oryza glaberrima (African rice): 127782912
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Entry
127782912 CDS
T08853
Name
(RefSeq) chromatin modification-related protein EAF1 B-like isoform X1
Organism
ogl
Oryza glaberrima (African rice)
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Gene cluster
GFIT
Motif
Pfam:
HSA
Myb_DNA-bind_6
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
127782912
NCBI-ProteinID:
XP_052166150
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Position
8:complement(3773974..3791144)
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AA seq
1903 aa
AA seq
DB search
MGGIAECGVNIDQKASPRRAAIEKAQEELRQEYDVREERRRELEFLEKGGNPLDFKLGHV
ASLSVQSTSVADHITEQNVISEAKGSFAFAASPHGDSVESSGKPGSSSCRDANTADNLML
LDGDTSNTGGEKLIKRGTKRTNVSQPDVSLRCDGQNNVKEAEDSSLFRPGAKNQAYARRR
SKSSRENATASVGSLPVSPLYSQGKDAKGIIQETKSEDHGASSIGNSKPASPDRNNTSKV
ASLGDHDAMEMDNTNEGNQAATHETTNIKDGVETPEISPNSVDGNSQLIGDGLVVTATTS
AESPDTSPKEATLMATSSFPSSCNEVLEEACAAEEAGNGCSDKNLVVHADDMVSKSSVPP
SEVEIASLNENEADIPCADVSKTVDEHPGKSENLSGKVSDEDLGDAIPSDKDGNKDGQPE
GGDMPTVVDGVSNSVQPEVNNTIYAKDDVDVHNKMVDAQKDTGNLATSGLDKVDKEACSN
LKKNNKCSPDSNIADKLDSVTVASGLLTKDVPSSVSLMNPDNDVNKTGENIPMMEKKECE
DSTVAKKEHEDSILRRARLIEVNIKKAGERSLCNISLEKKPKSHWEFVLEEMAWMANEFM
QERLWKSAAASQMCHWIALSGRATFEEANIQRKQKSIARILAKSIMKFWCSAETLRATSG
EMRKEKQAEESIGIGEKKVAGINAEKEQCNEPLEQEKLQSPIQSYALKFLKDNCNISECL
SLAEAPATPDRLNDFGILKVPDQLSEANLFYGVAPGAMQAYREFVEGPFVANKKTNNSRQ
KNDYEPSTTGSVADAHRGHAYEDDDVEASTYVLHGTYDDGLPSKSSHKKKHLIQQRMNGT
RHYSTGVDMPYDPYVESKPGNQPFLSNGKRPSDFFNIPTKRIRTAARQRVVSPYPANASG
ATAFTSKTDASSGDTNSCQDDQSSLHGGSFPRKNVDIESTVDFDRQLYDGSEVSTKSKKK
KKSKHPGYKTPQSVAESCSLIAGKGIACDPRPQVDLIAQYEQKDYLKKRSEVHQFDSNGN
IVINGQHAAKKPKLMNQAPDVSLEALTPVGPMVSPAASQMSNMANPTKIIKIITNRDRGR
KNKVLKMAASHSGPGSPWSSFEDQALVVLVHDMGQNWELVSDALNSIVQLKCIYRRPNEC
KDRHKLLTEKGSGDGADSADDSGSSQHYQSTLPGIPKGSARHLFQRLQGPFEEETLKAHF
EKIIFLGQKLHPNRRKGESQELKQINPLHSSHLHALSQACAPGVILMPLDLCDAMTPNPD
ALSIGYSGSHASGLMLPNHPSSIGPTLPTGNMNTRLPGSPGMVLGNTLPSPSTPNTPRDS
QRYGMPRPTSLQGDEQQRIQYNQMLNSRSLQQPGVPVPGAPAGVDRGVRMMPGAHGMGVM
TGLNRGTPVTRPPFPRLGSSGMLNMVSPGNMLPNNGQGMQNTVNVHPGTIPGHGNTMLRP
RDPMQMLRPGQNMEEHRQMMQEFQMQVSQGNNQSIHFSGTPFSNVGASSPGQPFPVQSSQ
PHQMPQQSHVLGNTHHPHIQGTTQSSPQQQAYAMRLAKDRHMQQCMMTQQQHPLSGASAV
STVQNGSQMQQQSQGPASSAIPSSQSQHKQQHPAQNSLDSSVPPNQPVNTSHKQKKQQGQ
QQSRQNQQQRNQGSQQAKLMKSLGRGNMMHQSSPVDATQASGISTTSKNQVSDKSMVQQG
PGYFAGNKGLVPSVVQPGNQPKIYGSQMPHSPIQTSDVGSQSSMQGSPNQTMLTSQQAPL
HSSSPLAQQQQQRYMNPSHNNIQRLVMQQNRHMNTDGRIESPVDQVQHNQAIPSTSIAKS
TDSGSPGGVSSINQRRQESSHDPTTVPSTSQLASSPQDTFVGNEMLLSVSSQGMLQRQMS
GGVPIHGHGIGGQRQQLQSRQQQQQKPAVQGSVYAHPSNSGPG
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaattgcagaatgtggtgtgaacattgatcagaaagcttcgccacgccgtgcg
gccatagagaaagctcaagaggagcttaggcaagaatatgatgtccgtgaagaacgaaga
agggagcttgaatttttagagaagggaggtaaccccttggatttcaaacttggacatgta
gcatcacttagtgtccagtccacttctgttgcagatcatataaccgaacaaaatgtgata
agtgaagctaagggcagctttgcgtttgctgcctcaccccatggggattcggttgaaagt
agtggcaagccaggaagttcatcatgccgtgatgccaacacagctgataatcttatgctt
ttggatggagataccagcaacacaggtggggagaaacttatcaaacgtggtactaaacga
actaatgtatctcaacctgatgtgtccctgcgctgtgatggtcaaaacaatgtaaaagag
gctgaagattctagtttgttccgccctggggcaaagaaccaggcgtatgctcgtcgcaga
tcaaaatcaagcagggagaatgccactgcgtctgttgggtctctaccagtttccccacta
tattctcaagggaaagatgcaaaagggataatacaagaaacaaaatcagaagatcatggt
gcctcatctattggcaactcaaaaccagcaagtccagatcggaacaacacatcaaaggtt
gcttcattaggtgatcatgatgcgatggagatggacaacactaatgaaggaaaccaagca
gcaactcatgaaacaacaaacatcaaagatggtgttgaaacaccggaaatctcaccaaac
agtgtggatggtaattcacagcttattggagatggtttggtagttactgcaactacttct
gcagaatcccctgacacaagtccaaaagaagctactttaatggcaacttcttcatttcca
tcttcatgcaatgaagtcttggaagaagcatgtgctgcggaagaagcaggtaatggatgc
tcagataaaaatttggttgttcatgcagatgatatggttagcaagagttctgttcctccc
tctgaggtagaaattgccagtttgaatgaaaatgaagcggatataccatgtgcagatgtg
tctaagaccgttgatgaacatcctggaaaaagtgagaacttatcagggaaggtgtctgat
gaagatttaggtgatgctataccttctgacaaggatggaaacaaagatggtcaaccagaa
ggtggtgacatgcccacagttgttgatggcgtttctaactctgttcaaccagaagtcaac
aataccatttatgccaaagatgacgttgatgtccataacaagatggttgatgcacaaaag
gacacagggaatcttgctacttctggtcttgacaaagtcgataaggaagcatgttctaat
ttgaaaaaaaataataaatgttctcctgattctaatattgctgataagttggattctgtt
accgtggcgtctggtttgctcacgaaggacgtgcctagttctgtgtcattaatgaaccct
gacaatgatgttaataaaactggtgaaaatattccaatgatggaaaagaaggaatgcgaa
gattctactgttgccaagaaggaacatgaagattctatccttagaagggcacgattaata
gaggtcaatatcaagaaagctggtgaacgatctctctgcaatatttctttggagaagaag
ccaaagagtcactgggaatttgtcctggaggagatggcttggatggcaaatgaatttatg
caggagcgcctgtggaaaagtgcagcagcttcccagatgtgccactggattgccttaagt
ggtcgagcaacatttgaggaagcaaacattcaaaggaaacagaaatcaattgctagaatc
ctagccaagagtatcatgaagttttggtgttcagctgagactttacgagctaccagtggt
gaaatgcgtaaagagaagcaagcagaggagtcaattgggattggggaaaaaaaggtggct
ggaatcaatgcagaaaaagaacagtgtaacgaacctctggaacaagagaagcttcagtct
cctattcaaagttatgcactaaagtttctgaaggacaactgtaatatatctgagtgtctg
tcgttagctgaagcaccagctactcctgacaggctgaatgattttggcattttgaaagtg
ccagaccagctttcagaagcaaacctattttatggtgtagcccctggtgcgatgcaggca
tacagagagtttgtggagggtccttttgtggctaataagaaaaccaataactctcgacag
aagaatgattatgagccatctacaacaggctctgttgcagatgcacataggggacatgca
tatgaagatgatgatgtcgaggcatccacttatgtattgcatggtacttatgatgatggt
ttgccatcaaaatcgagtcacaaaaagaaacaccttattcagcagaggatgaatggcaca
aggcattacagtactggtgttgacatgccttatgatccatatgtggagagcaagccagga
aaccagccatttttatcaaatggaaaaagaccttcagatttctttaatattcctacaaaa
cgcatccggacagctgctagacaacgagttgtaagcccatatcctgctaatgcttctgga
gccactgcattcacaagtaaaacagatgcttctagtggagacacaaactcttgtcaagat
gaccaaagttcattgcatggtggatcttttccaaggaagaatgtggatattgaatcgaca
gttgattttgatagacaattgtatgatggcagtgaggtatctactaagtcaaaaaagaag
aaaaagtctaagcaccctggatacaagacacctcaaagtgtcgctgagtcttgctctttg
attgctgggaagggcattgcctgtgatcctagacctcaggttgatttgattgctcaatat
gagcagaaggattatttgaagaagagatcagaggtccatcaattcgattcaaatggaaat
attgtgataaatggtcagcatgctgccaagaagcctaaattgatgaaccaagcaccagat
gtttcattagaagcacttacaccagttggcccaatggtatctcctgctgcttcacaaatg
agtaatatggcaaatcctactaagattataaagatcattacaaaccgggatcgtgggaga
aaaaataaagtgctcaagatggctgctagtcactcaggccctggaagtccatggtcgagc
tttgaggatcaggctcttgttgtgcttgtacatgatatgggtcaaaactgggaactggtt
agtgatgcactgaacagcattgttcaattgaagtgtatatatagaaggcctaacgagtgt
aaagatcgccataaacttctcacagaaaaaggttcaggtgatggtgcggatagcgcagat
gactcgggctcatcacaacactatcagtccacattgcctggcatcccaaagggtagtgct
agacacctgttccagcgacttcaaggaccgttcgaggaagagactcttaaggcacacttc
gagaaaataatattccttggtcaaaagttgcatccaaatcgtagaaagggtgagagccaa
gagctcaagcagataaacccactccattcttctcatcttcatgcactttctcaagcatgt
gcacctggagtcattttgatgccgcttgatctttgtgatgcaatgactccaaacccggat
gcactttctattggttactcgggatctcatgcaagtggtttaatgcttccaaaccatccc
agttccattggtcccacccttcctactggtaatatgaatactaggctaccagggtctcct
ggtatggttttaggcaatactttgccatcaccttcaacaccaaatactcctagggattct
cagaggtacggaatgcctagacctacctctctgcagggtgatgagcaacaaagaatccag
tacaatcagatgctcaacagcagaagtcttcagcaacctggggtgcctgttcctggtgcg
cctgctggagttgatcgtggtgttcggatgatgcctggtgctcatggtatgggggtgatg
actggactaaatcgtggtactccagtgaccaggccgccctttccaaggcttggttcctca
ggaatgctaaatatggtttcacctggaaacatgcttcccaacaatgggcaaggcatgcaa
aacacggtgaatgttcatcctggtaccatacctggccatggaaatactatgttgaggcca
cgcgatccaatgcagatgcttcggcctggccagaacatggaagaacataggcagatgatg
caggagtttcagatgcaagtatcgcagggaaataaccagtccattcatttcagtggtact
ccattttccaatgtcggagcatcttcacctggtcaaccttttccagttcagtcatcccaa
ccacatcagatgccacaacagtcacacgtgcttggaaatacacatcacccccatattcaa
ggaacaacccagtcaagcccacagcagcaggcttatgctatgcgcttggctaaagataga
cacatgcaacaatgcatgatgacccaacaacagcacccactttctggagccagtgcagtg
tcgactgtacagaatggttcacaaatgcaacagcagagccaagggccagcttccagtgct
atcccatcttcgcagtcacaacataaacagcagcatccggcacaaaattcactagatagc
tcagtgcctcccaaccagcctgttaatacatcgcataagcagaagaagcaacagggtcag
cagcagtctagacaaaaccagcagcaaagaaatcaaggtagccagcaagctaagcttatg
aagagcttaggccgagggaatatgatgcaccagagttcaccagttgatgccactcaagca
agcggtatttctacaacctctaaaaaccaagtttctgataaaagtatggtgcaacagggc
ccggggtattttgctggtaataagggcttggttccatcagtggttcaacctggtaatcaa
cccaagatatatgggtctcagatgcctcattcaccaatacaaacatcggatgtaggtagt
caaagctcaatgcagggttctcctaaccagactatgttaacttctcaacaagctccactt
cattcgtcatctccattggcacagcagcagcaacaacggtacatgaatccatcacataac
aacatccagagattggtgatgcaacaaaaccgtcatatgaacactgatggtaggatagaa
tcacctgttgaccaagttcaacataatcaggcaattccctccacatccattgcaaagagt
acagattcaggtagcccaggtggtgtttcatctataaaccagcggagacaagagtcatct
catgatccaactacagttccatcaacctcgcagttagctagctcgcctcaagataccttt
gttggaaatgaaatgctgttgtcagtgtctagccaaggcatgttgcaaaggcaaatgtca
ggtggcgtgcctatacatgggcatggtattggtgggcagaggcagcagctgcaatctcgg
cagcaacagcagcagaagcctgctgttcaaggcagtgtgtatgctcatccttcaaattca
ggaccaggatga
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