Oryza glaberrima (African rice): 127786176
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Entry
127786176 CDS
T08853
Name
(RefSeq) zinc finger CCCH domain-containing protein 19-like isoform X1
Organism
ogl
Oryza glaberrima (African rice)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
SWIB
GYF
zf_CCCH_4
zf-HC5HC2H
zf-CCCH_2
zf-CCCH
Torus
Motif
Other DBs
NCBI-GeneID:
127786176
NCBI-ProteinID:
XP_052169469
LinkDB
All DBs
Position
10:19123636..19133593
Genome browser
AA seq
1753 aa
AA seq
DB search
MDGGTGPGAELLSPGEAEWPPELRLPPPPPPHPPPPPPPLEPAPPSTPQLRGEASPPPPP
PPPVGPPGAAVVAAAARKEASASAEGFDDSHFLGSIMGAPAHQHQHQHQQPPAVGPPVVV
KRKRGRPPKNRDGAAPPPPPKPVKKREDDEDVVCFICFDGGNLVVCDKKGCTKVYHPACI
KRDESFFRSRAKWTCGWHLCSTCEKAVQYMCYTCTYSLCKGCIKQKPVKFFGVRGNKGFC
DTCYSTILLIESKDDRAKAKVDFDDKNNWEYLFKLYWLDLKGKHSLTLEELVNAKSCWTV
RSTSARREKEDSSNDLYDANFDLDASSDGASRKRRRNSFSGKRGRKRQNNGAESLPKRVQ
NEGMTFIGDTQWASSELLEFIGHMRNGDISYISQFDVQILLLEYVKQKNLRDPRRKSQII
CDARLANLFRKPRVGHFEMLKLLEMHFHAKETVNGDGQKGIDSDSAQIDSGGYSDMPSKL
CSDKRRKIHKKIERESPANLEDYAAIDMHNINLIYLRRSLLEDLIDDNGTFSDKITGAFV
RIRTPCVGQKQDIYRLVKVLGTHKVAERYSVGKKTTDHALEILNLDKKEVITMDTISNQD
FTEEECKRLRQSMKCGLITRLKVGDIHEKAKIFQLLRVNDWLENEKQRLSHLRDRASETG
RRKQLRECVEKLQLLGTPEERARIINEDPEVHVDPCMSPDYESAEELDVKKAGISFDSTS
RNGSDLLFLGRKGIETNSLQNHRQNCSATSHHTTTSPPTEGMTHGQGEEASFASSEIVSG
DMEPEKVWHYKDPSGSVQGPFTLLQLSKWAAYFPRDLRIWLTFESEQNSLLLTEVLSKQQ
KDFIQPSPEVDNNRSTWEGVGQDRVDSSLTGNNSSSPIGYNVIYSSRLPSPSADYRASAR
EGPNLPSGTLPFMTSQKTQKDPQMLHGQAQHQGDYSCTIPSSVVSYRPAGSHDEWPPRGN
IGEWNNSQDSGGMWSPTTPHMSRSNLEHQPDRCITKKQLQNDSKRNTLAGSAENLNSQMD
FGSQKVHIPTPQQPERDLATSVGTSRQSEFKTCHQEGSHWSSTADSITHDGLQLSLASAK
PESCSAVNPIRDGDSSSASRVPNQSGAHVYSPPHPATTNLSKSEETMNQCKSCEPEASNK
SRKPDASYAPVNQHPKPESDPVLPDTQDFERTHPSPSTEHDTKEPLKDQSRSTSVAPEGS
GTKAHGQSSIAFISEASGPLSSKIVGLQPPKDTSFLVERDIKDGGSITQTEQQKEESTAF
KKENVAVDPISDSEAIVSGVLESLTETYNLHEETALENFTPTSAEEEQPQCSTPIALSPW
DETSDYQGEAVDSALWGVQDDQNNEMWSLSSPTPTLQPSGIGADTKGASCAIEEVIVAQG
NSGVVEPSPALEKKRIEKVPSASIDRGVPEQVKPKSDAALSPEESRKPSGLQLSSTYLQG
STKSSGLPPSGTSLDGGIEPSGLLPSGTSLEWGTKISGVQSSASSLEGSKKAFVRQPSGS
SLEGNTKASGRQPSGSSIEGSKKPSDRQPSGASQEGNTKPSGWQQSVSSLEGGTKPSGWK
PSISIDTNTKASGWLRSSSSPDVNRKASAWQSSGSSPVAGSSKASGWQPSPRESSKSKPN
STWGAGQSRNSSSHQSTTPTAKYSSETPRRQGNNNTNSAGWGDSLGNKSWHSPSGNASSR
GSHSSHHHDRHNQSSEPWRGGSNHSRRSDHRQEHGNGGSSRSSSSRGQSQRGICRYYENG
YCRKGTSCQFLHR
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atggacggggggacggggccgggggcggagctgctctcgccgggggaagccgagtggccg
cccgagctccgcctcccgcctccgccgccgccgcatcctcctcctcctcctcccccgctc
gagccggctccgccatccactccccagctccgcggcgaggcgtccccgcccccgcctccg
cctccgcccgtgggaccacccggcgcggcggtggtggccgccgccgcgaggaaggaggcg
tccgcgtccgccgaggggtttgatgactcgcacttcctcggatcgatcatgggggcgccc
gcgcaccagcaccagcaccagcaccagcagccgcctgccgtggggccgccggtggtggtg
aagaggaagagagggaggccgccgaagaacagggatggagcggcgccgcctccgccgccc
aagccggtgaagaagagggaggacgacgaggacgtggtgtgcttcatctgcttcgacggg
ggcaatctcgtggtctgcgataaaaagggttgcacaaaagtctatcatcctgcttgcatc
aagcgcgacgaatcattctttcgatctcgggcgaaatggacatgtggttggcacctatgc
agcacctgtgaaaaggcagtacagtacatgtgctatacttgtacatactccctctgcaaa
ggttgcatcaaacaaaagccagtcaaattctttggtgtcagagggaataagggcttctgt
gatacctgctatagcactatactgttgatagaatccaaagatgatcgtgccaaggctaag
gtggacttcgatgataaaaataattgggaatatctcttcaagttgtattggttggatctt
aaagggaaacactctctaacattggaagaacttgtcaatgccaaaagctgttggactgtt
cgtagcacttccgctaggagagaaaaggaagattcatccaatgacctctatgatgcaaat
tttgaccttgatgccagttctgatggcgcctcaagaaaacgaagacggaatagtttttca
gggaaaaggggacggaaacgccaaaacaatggtgctgaaagcttacctaagagagtgcaa
aatgaaggaatgacttttataggtgacacacaatgggcatcatcagagctcttggaattc
attgggcacatgagaaatggtgatatttcttatatttcccaatttgatgttcagattctt
ctgcttgagtatgtaaagcaaaaaaatcttcgtgatcctcgcagaaaaagtcaaattatt
tgtgatgcgaggcttgccaatttgtttaggaaaccacgtgttggccactttgagatgtta
aagcttttggaaatgcattttcatgcgaaggagacggtaaatggtgatggccaaaaaggc
attgactcagattcagctcaaatagacagtggaggatatagtgatatgccaagtaaatta
tgctctgataagaggaggaagattcataagaagattgagagagaatcaccagctaatcta
gaggattatgcagcgattgacatgcacaatatcaatttgatttacttgcgccgcagcttg
ctagaggatcttattgatgataatggcacgttctctgacaaaattactggtgctttcgtg
aggataaggactccttgtgttggccaaaagcaagatatttaccgcctggtgaaagttctt
ggtacacataaagtagcagaacggtacagcgtcggtaagaagacaactgatcatgcgctt
gagatattaaatttagataaaaaggaggttatcacgatggatacaatctcaaatcaagat
ttcacagaggaggaatgcaaacgcttacgccagagcatgaagtgtggtttgattacccga
ctaaaagtgggagacatccatgagaaagccaaaatattccaactgctgcgagttaatgat
tggttagaaaatgaaaagcagagactgagccatctacgtgatcgtgctagtgaaactggg
cgcagaaaacagcttagggagtgtgtagagaagttgcaacttctgggcactcctgaagaa
agagcacgcatcattaatgaagatccagaagtacatgttgacccatgtatgtctcctgat
tatgaatctgctgaagaattggatgttaagaaagctggtatttcatttgattcgacaagt
aggaatggatcagacctgttatttcttggaagaaaaggaatcgaaacaaactctctgcag
aatcatagacaaaattgttctgccactagtcatcacacgactacaagtccacctactgag
ggtatgactcatggacaaggagaagaagcatcgtttgcatcgtcagaaattgtatcaggt
gacatggaaccagaaaaagtatggcactacaaggatccttcaggaagtgttcagggccca
ttcacacttttacagctgtccaagtgggcagcttatttcccacgtgacctgagaatatgg
ctaacatttgagagtgaacaaaactcactgcttttgactgaagttctctcgaaacaacaa
aaagatttcattcagccttctcccgaagttgacaataataggtcaacatgggaaggcgtt
gggcaagatagagttgactcaagtttgactggaaataactcttcctctcctattggttat
aatgtgatctactcttctcggttgcctagcccatctgctgactatcgtgcatcagctaga
gaaggcccaaaccttccgagtggaaccttgccattcatgacaagccagaaaacacaaaag
gatcctcagatgttgcatggccaggcacagcatcagggtgattattcatgtaccatcccg
tcatctgtggtttcatatagaccagctggttctcatgatgagtggccccctcgaggcaac
attggtgaatggaacaatagtcaggatagtggtggtatgtggagcccaaccacacctcac
atgagtcggagcaatttggagcatcagcctgacaggtgtattacgaagaagcaattgcag
aatgattccaaacgtaatacgctagcaggatctgcagaaaatctaaattcccaaatggat
tttggttcacagaaagtacacattcctactccacaacaacctgagagagatcttgccact
tctgttggtacttcaaggcaatctgagtttaaaacttgtcatcaggaaggctctcactgg
agttcaacagcagactccattactcatgatgggcttcaattatctcttgcttcagcaaag
cctgagagctgctctgcagtaaatcctattagagatggagattccagttcagcttctcgt
gtgcctaatcaatcaggagctcatgtctatagcccaccacacccagctacaactaattta
agcaagagtgaggagactatgaatcagtgtaaatcgtgtgagcctgaagcatcaaataaa
tcacgcaagcctgatgcatcatatgctccagttaatcaacatcctaagcctgaaagtgat
ccagtgttacctgatactcaagattttgagcgcacgcatcctagcccaagtactgaacat
gacacaaaggagccattgaaggatcaatcgaggtcaacatcagtagcacctgaagggtcg
ggtacaaaggcacatggacagtcttccatagcttttatatcagaagcatctggcccactt
tctagtaaaattgttggcttgcaaccacccaaggatacatcatttcttgttgaaagagat
ataaaagatggaggttccattacacaaacagagcaacaaaaagaagagagtacagcattt
aagaaagagaacgtagctgttgatcctatctctgacagtgaagcaatagtatctggtgtg
ttggaatctttgacagagacatataatctgcatgaagaaaccgctttggaaaatttcacg
ccaacatctgccgaggaagaacaaccgcaatgctctacccctattgcattatctccttgg
gatgaaacaagtgactatcaaggtgaagctgttgattctgctctatggggtgtccaagat
gaccaaaacaatgaaatgtggtcattgtcttcaccaacacctactctccaaccttcaggt
attggagctgataccaaaggtgcttcctgtgctatagaagaggtgatagtagcccaagga
aatagtggtgttgttgaaccgtcaccagcactggagaagaaaaggattgaaaaagtacca
agtgcttccatagatcgtggagtaccagagcaggtaaaaccaaaatcagatgctgcatta
tctccagaagagagcagaaaaccttcaggtttgcaactatcaagcacatatctacaaggg
agcacaaaatcttcaggtttgccaccgtcaggcacatctctagatgggggcatagaacct
tcaggtttgctaccttcaggaacttctttggagtggggtacaaaaatttcaggtgtgcaa
tcctcggcctcatctctagaggggagcaaaaaggcttttgttaggcaaccatcaggctct
tcactagagggaaacacaaaagcgtcaggtaggcagccgtcaggttcatctatagagggg
agtaagaaaccttctgataggcagccatcaggtgcatctcaagaggggaatacaaagcct
tcaggctggcaacaatctgtgtcgtctcttgaaggtggcacgaaaccttcaggctggaaa
ccttcaatttctatagacacgaatacaaaagcttcaggttggctgcgatcgagctcatct
cctgatgtgaacagaaaagcttcagcatggcaatcatcaggttcttcgcctgttgcaggg
agctcaaaagcatcaggttggcagccatcacctcgcgagagctcgaaatctaagcctaat
tccacatggggtgccggccaaagccgcaactcgtcttcgcaccaatcaacaacaccaaca
gctaaatactcatcagaaaccccaaggagacaaggaaacaacaacacaaattctgctggc
tggggagactctctcggaaacaagagctggcattcaccctcaggcaatgcgagcagccga
ggcagccattctagccaccaccatgaccggcacaatcagagcagcgaaccatggcgtggt
ggctcaaatcattccaggagatcagatcatcgtcaagaacatggcaacggtggctcgtcg
agatcatcgtcgtcgagggggcaatctcaaagggggatctgtagatactacgagaatggc
tactgcaggaagggcacttcctgccagttcctccaccgttga
DBGET
integrated database retrieval system
