Oncorhynchus gorbuscha (pink salmon): 123998730
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Entry
123998730 CDS
T07892
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25-like isoform X1
KO
K11849
ubiquitin carboxyl-terminal hydrolase 25 [EC:
3.4.19.12
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
123998730
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
123998730
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123998730
Peptidases and inhibitors [BR:
ogo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123998730
Ubiquitin system [BR:
ogo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123998730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UIM
UBA_4
Motif
Other DBs
NCBI-GeneID:
123998730
NCBI-ProteinID:
XP_046159787
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All DBs
Position
LG16:complement(65511873..65568812)
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AA seq
1200 aa
AA seq
DB search
MTVEQNVLQQHSQKHQQTLLNQLREVTGTTDVQLLQQALQVSNGDLAEAVAFLTEKNAKV
PQQDEATYYQTTQVGNDRYISVGSQADTSEYLPHPALPGAVPSQGDANVIDLTGDDKDDL
QRAIALSLEESSRAFRETGITDEEQAISRVLEASIAENKASLKRTHTEVWSDSPNPHDRK
RMENCPVGLKNVGNTCWFSAVIQSLFNLLEFQRLVLYYSPPARVQDLPRNQKEHRNLPFM
QELRNLFSLMVGSKRKYVDPSRAVEILKDAFKSSESQQQDVSEFTHKLLDWLEDAFQMKA
EEDREGEKPKNPMVELFYGRFQAVGVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMI
EGEIESLHSSAENSAKSGQEHWFTELPPVLTFELSRFEFNQALGRPEKIHNKLEFPSMLY
MDRYMDRNREITRIKREEIRRLKEQLTLLQQRLERYLSYGSGPKRFPLADVLQYAMEFAS
SKPVCTSPLEDIDTSAPPGGTTGQLLPALSTAEQGPSCTLPEGLSPAPTQAPSTQQRVPI
HKPFTQSRLPPDLPMHPAPRHITEEELRVLEGCLHRWRSEVENDTHDLQGSISRIHRTIE
LMYSDKSMMQVPFRLHAVLVHEGQANAGHYWAYIYDPHQQRWMKYNDISVTKSSWEELVR
DSFGGYRNASAYCLMYINDKKPFLIEEEFDKETGQMLSGLDKLPSDLKAYVKEDNGLFDK
EIEEWDTLQARKAQQEKLALAAATAAAETTTSPQPMSTEPSPPDSWGPQQDPEYMEQPSP
TDDSKHLQEDTERAISKAAAEKQEERSPEGLLTASSGGSLSPPLPPKPQSDVQVNTETPL
APPSDPQPVDPSLTPSSDPPMEDEPLSQRTVEVAIPQVGTFVIESEEGGYDDEAMMTPNM
QGIIMSIGKARSVFEKLGPEAAFFKAIKVEYTRLLRFAQEDTAPENDYRLQHVIVYFIHN
QAPKKILERTLLMQFADRNLSFDERCKSIMKVARAKLDLVKPEEVNMEEYEMWHQDYRNF
RETTIFLMIGLELFQKKCFVEALMYLIYSYQYNRELLVKGLYRGHNDELIGHYRRECLLK
LNENAAGMFESGEEPEVCNGLSIMNELVVPCIPLLLVHDTEKDLLAVEDMRNRWCSYLGQ
EMEPNLQEKLTDFLPKLLDCSTEIKSFHDPPKLPTYSTLELVERYGRVMASLSWVPADGR
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtggagcagaatgtcctccaacagcattctcagaagcaccagcagactctactg
aaccagctgagggaggtcacaggcaccacagatgtccagctgctccagcaggccctgcag
gtcagtaatggagacctggcggaggcggtggcctttctgacagagaagaatgccaaggtg
ccccagcaggatgaggctacctactaccagaccacccaggtgggcaacgacagatacatc
agcgtgggcagccaggcagacactagtgagtacctacctcacccagcactgcccggggca
gtccctagccagggagatgccaatgtgattgacctgactggtgatgataaggatgacctc
cagagggctatcgctctcagcctggaggagtccagccgggccttcagggagactggcatc
accgacgaggagcaagccatcagcagagttctggaggccagcatagcggagaacaaggcg
agcctgaagcggacacacacggaggtgtggagtgactcgcccaaccctcacgaccggaaa
aggatggagaactgccccgtcgggctcaagaacgtgggcaacacctgctggttcagcgcc
gtcatccagtctctgttcaacctactggagttccagaggctggtgctgtattactcccct
cctgccagagtccaggacctgcctcgcaaccagaaggagcacaggaacctgcccttcatg
caggagctgagaaaccttttctcactcatggtgggttctaagaggaagtacgtggaccca
tcgcgtgctgtggagatcctcaaggacgccttcaagtccagcgagtctcagcagcaggat
gtcagtgagtttacacataagctgttggactggttggaggatgccttccagatgaaggca
gaggaggacagagagggtgagaaaccaaagaacccgatggttgagctgttctatggccgc
ttccaggctgtgggggttctggaaggaaagaagtttgagaacacagagatgttcgggcag
taccctctgcaggtgaatggctttaaggacctgcacgagtgtttagaggcagccatgatc
gagggggagatcgagtccctacactcatctgcagagaactctgccaagtctggacaggag
cactggtttaccgaacttcctcctgtcttgacctttgaactgtcgagatttgagttcaac
caagccctgggtcgacctgagaagatccacaacaagctggagttcccctccatgctgtac
atggacaggtatatggacaggaaccgagagatcaccaggattaaacgagaggagatcagg
agactgaaagagcaactgactttacttcaacagcgtctggagaggtatctgagctatggc
tctggtcccaagaggtttcctctggcagatgtcctgcagtacgccatggagtttgcctcc
agtaagccagtctgcacctctcccttggaggacatcgacacgtcagcaccacccggtggc
acaacggggcagctgctgcctgctctaagcacagccgaacagggtccctcctgcaccctt
ccagagggtttgtcccccgcccccacccaagctccctccacccagcagagggtgcccatc
cacaagcccttcacccagtcccgactgccccctgacctgcccatgcacccagccccacgc
cacatcactgaggaggagctccgggtgctggagggctgcctgcaccgctggaggagtgag
gtggagaacgacacccatgatcttcagggcagcatatccagaatccacagaaccatcgag
ctgatgtattctgacaagtccatgatgcaggttccgttccggctgcatgcggtgctggtg
cacgagggccaggctaacgctggccattactgggcctacatctacgacccccaccagcag
cgctggatgaagtacaatgacatctcggtcaccaaatcctcctgggaggagctggtcagg
gactcgttcggaggctaccgtaacgccagcgcctactgcctcatgtacatcaacgacaag
aagcctttcctcatagaagaggagtttgataaggagacgggtcagatgctgagtggtctt
gataagctcccttcggacctgaaggcctacgtgaaggaggacaatggcctgtttgacaag
gagatcgaggagtgggacaccctgcaggcacgcaaggcccagcaggagaagctggccctg
gccgcagccactgcagcagcagaaacaacaacatcccctcaacctatgagcacagagccc
agtccaccagacagctggggccctcagcaggacccagagtacatggagcagccgtccccc
acagatgactccaagcacctgcaggaggacacagagagggccatctccaaggctgcagcc
gagaagcaggaggagaggagccctgagggactgcttactgcatccagtggagggagtctc
tccccaccccttccccctaaaccccagtccgatgtccaggtgaacactgaaacccccctc
gcccctccctctgaccctcagcctgtggatccttccctcaccccttcctctgaccccccc
atggaggatgagcccctttcccagcgtacggtagaggttgccattccccaggtgggaacc
tttgtcatcgagtcagaggagggggggtacgatgatgaggccatgatgactccaaacatg
cagggtattataatgtccattggcaaggccaggagtgtgtttgaaaagcttgggcctgaa
gccgccttcttcaaggccattaaggtggagtacacccgtctgctgaggtttgcccaggag
gacactgccccggagaatgactaccgtctgcagcacgtcatcgtctacttcatccataac
caggcccccaagaagatcctggagagaaccctcctcatgcagttcgcagaccgcaaccta
agctttgacgaacggtgtaagagcattatgaaggtggcccgtgccaaactagaccttgtt
aagccagaagaggtcaacatggaggagtatgagatgtggcatcaggactacaggaatttc
cgcgagacaacaatctttctgatgattggcttagagctgttccagaagaaatgctttgtg
gaggccttgatgtatctgatctactcgtaccagtacaacagagagctgttggtcaaaggg
ctgtacagaggtcacaacgatgagctcataggtcactaccgcagagagtgcctgctgaaa
ctgaacgagaatgcagcggggatgtttgagtctggtgaggagccggaggtttgcaatggg
ctgagcatcatgaatgagctggtggtgccgtgtatccccctactgcttgtccacgacaca
gagaaggacctgctggctgtggaggacatgaggaaccgctggtgctcctacctggggcag
gagatggagcccaacctgcaggagaagctgactgacttcctacccaagttacttgactgc
tcgacagagataaaaagcttccacgaccctccaaagctgcccacctactccactctggag
ctggttgagcgctacggccgtgtcatggcctccttgagctgggtgcctgcggacgggaga
tga
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integrated database retrieval system
