Oncorhynchus gorbuscha (pink salmon): 124013002
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Entry
124013002 CDS
T07892
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124013002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124013002
03021 Transcription machinery [BR:
ogo03021
]
124013002
03036 Chromosome and associated proteins [BR:
ogo03036
]
124013002
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Helix-turn-helix
ARID
124013002
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124013002
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124013002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
124013002
NCBI-ProteinID:
XP_046183063
LinkDB
All DBs
Position
LG24:37325277..37454416
Genome browser
AA seq
2429 aa
AA seq
DB search
MAAQVASVATLNTSPPSELKKPDRDPLEESVPGEKQHENKEPGSDNGSPGQKDLQDGADA
GNVGGGGEPDMKNGNSSRVNNNNNQNDTGGPEGNNHPGMGHHHQGSFPPPPYGYNQHYSR
GPFHQHGGQQSPGMAAAAGPAVQSGNMMDPYPPNSQDHGFPNHFNNYSPFPNRTSYQGQG
YAMNSPRNNQPPAAGGQPGKQQPAGGTAASYNNQRYNMGNTQPTSTPTLNQLLTSPSSTR
SYQNYPQGDYSNQEGAGKGAADMASSQYGGGHPGWQQRSHQPPSMSPGNTGQPLNRNQPP
SPMDHVGKMRGQGYGGANPYSQQQGQGQGPPPPGAQQGASYPGQGYGPPGPQRYPMGMQG
RTPTGMSGMQYGQQMAGFGQQGPGGYGQQSQGYYSQHGPPPHPGQQQAPYPQQVHPSQGQ
GPPQGGPPQAQPPYNQGPPQPPQQSGPQQGQSGPSYPQQQGPPGQQPPQQQPPSQQQGPP
QQQQDRAAPPQAQPPPGHQQPPVHQPPPGHRSSPGPQGQNPSPGHSGPPQQQGQSQQGQP
SPYSQTPPLQQQGQSQQGQPSPYSQTPPLQQQGQSQEGQPSPYSQTPPLQQQGQSQQGQS
QQGQSQQGQSQQGQPSPYSQTPPLQQQGQSQQGQSQQGQPSPYSQTPPLQQQGQSQQGQS
QQGQPSPYSQTPPLQQQGQSQQGQPSPYSQTPPLQQQGQSQQGQPSPYSQTPPLQQQGQS
QQGQPSPYSQTPPLQQQSPFQGFPPPTQELSQDSFSSQSSAPPSNQPTTSNKSGTEDSMQ
GRPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPHLPGIR
GPSPSPVDSPSSVTPSRSGPLSPAAVPGNQMPPRPPSVHSDGILHTSMGQSAMGQDRVYM
RNPQMPPHGSPQQPGSALSPRQSSGGQILPGMGPYPQNNSMGNYGPQGGQYGPQGYPRQP
GYSGMPNANYPGGPGGMPGQAGGAPYAGMPPGRMGPGQMAARPYGPGMGPNMGPGIPPQV
TSGMCPPPGMNRKGPGGPPDAASAMHHGANSILNRPPGYPPNMPQGMMGAGPPYGPGPGA
INSMQGMMNQGGPYGGGPMGGNMANNTPGMAPSPEFGIDVKLNPAQKINNKLDGTPKPET
KKVKKKSNSSTTTNEKITRLYELGPEPERRTWVDRYLAFAEEKATGMTNLPAVGRKPLDL
FRLYVSVKEIGGLTQVNKNKKWRELSTNLNVGTSSSAASSLKKQYIQCLYAFECKIERGE
DPPPDLFTDAKKTTQPKIQPPSPAGSGSLQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQ
MPPMPVRLQDPFADGGDPAFARRNSMTPNSYQPGMGGPEMMGHMGPYESNKDPFGGMRKA
GEQFMTPGPGPNSGMEGQFNRGPPGPNMQMGPRQQYPYGPGYDRRQEPGMGPDGSMGPGA
PQPNLMPSGADSGMYSPSRPPPQQRHDSYGNQYPGQGAPPGGPYPNQQPGMFPQQQPNYK
RPPVDGAYGPPAKRHEGDGMYNVPFSGQQPGPQGQQDMYNQYNAGYPGSDRRPPGPQGQF
PFPFGRDRGPSSGGQQSPMPPQMMGSPMQAAPDGPMWQGRNEMGYPNYPNRQGPPGPGQG
PPQGYHSMNRSEEMMPGADQRMNHESQWPGHPSQRQSPYGPGGSGPPMSRPLQSNYQSSQ
NHISQVSSPAPMESRTSPSKSPYMHSGIKMQKAGPPVPASHIGQAPVQPPLIRRDISFPP
GSVEASQPILKPRGRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIST
FNLCQLPGFLELVVEYFRRCLIQIFGILKEYEVGDPGQRTLTDPHAADEDWSDEELPEQE
DMEEEEDEEDDDERKSNADTTTSSQQVQVKKEEEEEKSTPEKSTVEEEEEDEREGGESSS
TSSPPQNLSLLQEKPKQASKFDKLPIKMVRKKDPFPGGRSSKLGRRQSFDSGLIHWSIGG
GDTTEHIQTHFESRSDLLKQRKQVLPSTTESRKVAVPPTVSENPEETTKPGKEDQTTKTS
TPTTPAPVTATIDDVLSARQGSVTEEAVRGAAEEQKENRGQFLYSLRQAQQSRRNITILE
DEPHSKDETALSTVSDWQDALARRCVCVSNIVRSLSFIPGNDLEMSKHPGLLLLLGRLVL
LHHRHPERKQAPVTYEKEEDEDERMSCERDEWWWDCLEVLRENCLVTLANISGQLDLSIY
PESICLPLLDGLLHWAVCPSAEALDPFPMLGPHGALSPQRLVLETLSKLSIQDNNVDLIL
ATPPFSRLEKLYGTLVRLVGERKVAVCREMSVVLLANLAQGDSMAARAIAMQKASVGNLL
GFLEDSLAATQYQQSQSSLMHLQGAHFEPTSVDMMRRAARALHAMAKVEENHSEFTLYES
RLLDISVSPLMTSLVSHVICDVLFLIGQS
NT seq
7290 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcaggtcgctagcgtcgccactctcaacactagcccgccatccgaacttaaa
aagccggatcgggacccactggaggagtcggtaccgggagagaaacaacatgaaaataag
gaacctggatctgacaacggatctccgggccagaaggatctgcaggacggggccgatgct
ggaaatgtagggggaggaggggagcctgacatgaagaacgggaactcgtccagggtgaat
aataataacaaccaaaatgatacggggggaccggaggggaataaccaccccgggatgggc
catcaccaccagggctcattccctccacctccttacgggtacaaccagcactacagccgg
ggcccttttcatcaacatggcggacaacaaagccctggcatggcagctgcagcggggccg
gcagtgcagtcaggcaacatgatggacccatacccgcccaactcacaagaccacggcttc
cccaaccattttaacaactacagccccttcccgaaccggacttcttatcagggccaagga
tacgccatgaattccccgcgtaataaccagcccccggcggctggggggcagccaggcaag
caacagccagcaggcggaactgctgcctcgtacaataatcagaggtataacatgggaaac
acacagcccacgtctaccccgacattaaatcagctcctaacgtctcccagctctacgagg
agctaccagaattacccacaaggagactatagtaaccaggaaggggctggcaagggagca
gcagatatggccagcagtcagtatggtgggggtcatccgggttggcaacaaaggagccac
cagccgccttctatgagcccagggaacacgggacaacctctgaacagaaaccagcccccc
agccctatggaccatgtagggaagatgcggggccaggggtatggtggagccaacccctac
tcccagcagcaaggccaggggcagggccctcctcctccaggggcccaacagggtgcctcc
tacccaggccagggctatggacccccggggcctcaaaggtatcctatgggcatgcaggga
cgcacccccaccggcatgtctggcatgcaatacggacaacagatggccggctttgggcag
cagggtccagggggctacggtcagcagagccagggctactacagccagcacggcccccca
ccacaccctggccagcagcaggccccctacccccagcaggtccacccctcccagggccaa
gggcctccgcaagggggtccaccccaggcacagccaccctacaaccagggaccaccccag
cccccgcagcagtcggggccccagcaaggccagtccgggcccagctaccctcagcagcaa
ggacccccggggcagcagcctccacagcagcaacccccctcgcagcagcaaggacctccg
cagcagcagcaagatagggcggcccctcctcaggcccagccacccccaggccatcaacaa
cccccagtccaccagccaccccccggccaccgatcctctccgggcccccagggccaaaac
ccatctccaggtcacagtggacccccacagcagcagggtcagtctcagcagggccagccc
tcaccctactcccagaccccacccctgcagcagcagggtcagtctcagcagggccagccc
tcaccctactcccagacccctcccctgcagcagcagggccaatctcaggagggccagccc
tcaccctactcccagacccctcccctgcagcagcagggtcagtctcagcagggtcagtct
cagcagggtcagtctcagcagggtcagtctcagcagggccagccctcaccctactcccag
acccctcccctgcagcagcagggtcagtctcagcagggtcagtctcagcagggccagccc
tcaccctactcccagacccctcccctgcagcagcagggccagtctcagcagggtcagtct
cagcagggccagccctcaccctactcccagaccccacccctgcagcagcagggccagtct
cagcagggccagccctcaccctactcccagaccccacccctgcagcagcagggccagtct
cagcagggccagccctcaccctactcccagaccccacccctgcagcagcagggccagtct
cagcagggccagccctcaccctactcccagacccctcccctgcagcagcagtcgcccttc
caggggtttccacctccgacacaggagctctcccaggactcgttcagctcccagtccagt
gctcccccctccaaccagcccacgacttccaacaagagtggcacagaggacagcatgcag
ggacggccttctagtttaccagacctatctggttccatagatgacctgccgacgggtaca
gagggggctctgagtccgggggtcagcacgtcaggggtgtccagtagccagggggaacag
agtaaccccgcccagtcacccttctcccctcacacctcgccccacttgcctggcatccgc
gggccctccccctcccccgtggactccccttccagcgtcaccccctcgcgctccgggccc
ctctcacctgctgctgtgccaggtaaccagatgcctccccggccgcccagcgtccattca
gacggcattctccacacatccatgggccagtcagccatgggccaggacagggtgtacatg
cgtaacccccagatgcctccccacgggtcgccgcagcaacctggctccgccttatcccct
cgccagtcatcgggaggccagatacttcctgggatggggccctaccctcagaacaactcc
atggggaactacggccctcagggtggacagtacggaccacaaggttaccccagacagccc
ggttacagtggcatgcccaacgccaactaccccggtggtccggggggcatgccaggccag
gctggtggggcgccgtatgcaggcatgccccctggcaggatgggtccgggtcagatggct
gcccgcccctacggccccgggatgggccccaacatgggccccggcatacctccacaggtg
acctctgggatgtgcccccctccaggcatgaacaggaagggccccgggggccctccagat
gcagcctctgccatgcaccacggagctaactctatactcaacaggcctccaggttacccc
cccaatatgccccaggggatgatgggagcagggcctccgtatggccctgggccgggggcc
atcaacagcatgcaaggtatgatgaaccagggaggaccttacggaggagggccaatggga
ggcaacatggccaacaacacacctggcatggctcctagccctgagtttggcatcgatgtc
aaactgaacccagcccagaagattaacaacaagctggacggcacgcccaaacctgaaacc
aagaaggtaaagaagaagtcaaactcttcgacgacgaccaatgagaagataactcgtctg
tatgaactgggtccggagccggagaggaggacgtgggtagaccgttacctggcgttcgct
gaggagaaggccacgggcatgaccaaccttcccgccgtgggacgcaaacctctggacctc
ttcagactttacgtctcggtcaaagagatcggcggcctcacacaggtgaacaagaataag
aagtggagggagttgtccaccaacctgaacgtgggcacgtccagcagcgccgccagctct
ctgaagaagcagtacatccagtgtctgtacgccttcgagtgcaagatcgaacgtggcgag
gacccgcccccagatctcttcactgacgccaaaaagaccacccagcccaagatccagccc
cccagcccagctgggtctggatctctgcagggcccccagaccccccagtccaccagtagt
tccatggcggaggggggagacctgaagccccccacgccagcctccacccctcacagccag
atgccccccatgcccgtcaggctgcaggacccgtttgcagatgggggtgacccagcattt
gccagacggaactccatgacccccaacagctaccagcctgggatgggaggcccggagatg
atgggtcacatggggccctacgaatccaacaaggacccctttggtggcatgaggaaagct
ggagagcaattcatgactccagggccgggccctaacagtggtatggaggggcagttcaac
agaggccccccaggccccaacatgcagatgggtccgagacaacagtacccctacggacct
ggatatgacaggagacaggagccagggatgggtcctgatggcagtatgggtcctggggcc
ccccagcccaacctgatgccttcaggggccgactcggggatgtactcccctagccgaccc
ccaccgcagcaacgtcatgattcctatggtaatcagtatcctggtcaaggagcgccacct
ggtggcccctaccccaatcagcagccaggaatgtttccacagcaacaacccaactacaag
cgtcctccagtggacggggcctacggtcccccagccaagcgtcatgagggggatgggatg
tacaatgtccccttcagcggtcagcagccagggccccagggccaacaagacatgtacaat
cagtacaacgcaggctaccccggctctgaccgccgaccacctggcccccagggccagttc
cctttcccctttggccgagaccgggggccctccagcgggggtcaacagtcccccatgcct
ccccaaatgatgggcagccctatgcaggcagcccctgacggccccatgtggcagggacgc
aatgagatgggttaccccaactacccgaatcgccaggggcctccaggacctggccagggg
cccccccaggggtaccacagcatgaaccgctctgaggagatgatgccaggggctgaccag
cggatgaaccatgagagccagtggccgggacaccccagccagaggcagtccccctacggg
ccggggggttcggggccccccatgtccagacccttgcagtccaactatcagagctcccag
aatcatatttcccaggtgtccagccccgcccccatggaaagccggacgtccccctccaag
tctccatacatgcactcaggcatcaagatgcagaaggcggggccccctgtgcccgcgtcc
cacataggccaggcccccgtgcagccccccctcatcaggcgggacatatccttcccccca
gggtcagtggaggcctcccaacccatcctcaaaccccgaggacgactcaccatgaaagac
atcggcaccccagaggcctggagagtgatgatgtctctgaagtcaggcttactagcagag
agcacgtgggccttggacaccattaatattttactctacgatgacaacagcatttctacc
ttcaacctttgccagctgcctgggttcctggagctggttgtggagtatttcagacgctgc
ctcatccagatcttcggcatcctgaaggagtatgaggtgggagaccctggccagcggacg
cttaccgacccgcatgctgccgacgaggactggtctgacgaagagctgcccgagcaggag
gacatggaggaggaggaggatgaagaggatgacgacgagaggaagagcaacgcagacacc
accacctcgtcgcagcaggtccaggtgaaaaaggaggaggaagaggagaaatccacgcct
gagaagtcgacagtggaggaggaggaggaggatgagagggaaggaggggagtcttcttcc
acctcctcgcccccccagaacctcagcctcctacaggagaaacccaaacaggccagtaag
ttcgacaagctgcccatcaagatggtgcgtaagaaagaccccttccctgggggccgttcc
agtaagctaggccggcggcagagctttgacagcggactgatccactggagcatcggcggg
ggggacaccacggaacacatccagacacacttcgagagccggtccgacctcctcaagcag
aggaagcaggtgctgccatcgaccaccgagagtagaaaggtcgccgtgcccccgacggtg
tcagagaacccagaggagactactaagcctggcaaggaagatcagaccaccaagacctcc
accccaaccacgcccgccccggtcaccgccaccatcgacgacgtcctgtcggcccggcag
ggctcggtgactgaggaggcggtgcgaggagcagccgaggagcagaaggagaacagggga
cagttcctgtactccctccgccaggcgcagcagagccgacgcaacatcaccatcctggag
gacgagcctcacagcaaggacgagaccgcgctgagcacggtgtcggactggcaggacgcc
ctggctcgccgctgtgtctgcgtctccaacatcgtccgctcgctgtctttcattcccggc
aacgacctagagatgtccaaacacccagggctgctactgctgctgggccgtctggtcctg
ctccaccaccgtcacccagagaggaaacaggcccccgtcacctacgagaaggaggaggac
gaggacgagaggatgagctgtgagagggacgagtggtggtgggactgtctggaggtcctc
agggagaactgcctggtcactctggctaacatctctggccagttggacttgtccatctac
ccagagagcatctgtctgcccctgctggacggcctgcttcattgggctgtttgtccttcg
gccgaggccctggaccccttccccatgctggggccccacggggccctatccccccagaga
ctggtgctggagaccctcagcaagctgagcatccaggacaacaacgtggaccttatcctg
gccacgcctccattcagccggctggagaagctgtacgggacgctggtgcgtctggtcggg
gagaggaaggtggctgtctgcagggagatgtctgtggtcttactggccaacctggcccag
ggggacagcatggcggccagggccatcgccatgcagaaggccagcgtaggtaacctcctg
ggcttcctggaggacagtctagcagccacgcagtaccagcagagccagagttccctgatg
cacctacagggggcgcactttgagcccactagcgtagacatgatgcggcgagcggcccgc
gccctgcacgccatggctaaggtggaggagaaccactcagagttcaccctgtacgagtcc
cgcctactggacatctctgtctcaccactcatgacctctctggtgtcccatgtgatctgt
gacgtactctttctgattggccagtcatga
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integrated database retrieval system
