Oncorhynchus gorbuscha (pink salmon): 124021046
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Entry
124021046 CDS
T07892
Symbol
setdb2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2 isoform X1
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00310
Lysine degradation
ogo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
124021046 (setdb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124021046 (setdb2)
Enzymes [BR:
ogo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
124021046 (setdb2)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
124021046 (setdb2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
124021046 (setdb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
Pre-SET
MBD
DUF3439
Motif
Other DBs
NCBI-GeneID:
124021046
NCBI-ProteinID:
XP_046192313
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MDGSEKTEVARAKSFWVQVDVEETFDELYEYLTHLKHAIKTCTATDREYVQGMNMITLLD
SGLIVTPATTAPATTTAPATTTAPATTTAPATGNESFVEVVIGAEILTVSVPDIDDPQTP
LPPQQTEPVSPPSPLRYDGSIIPLSPPYPNREDLMTPLLPLQLPYQFHTCSQACVPHLPP
SAHHFRGHNPLRIPLLCSFQRQCAPTPPLTTGIETDCDGTEPDSKGEGSENSEGAELDSE
VTARGVVYKAPCGLSLCTPGEVLCFLVATESHSVLQVDDFTFDPLVQLECLRPPGLAVRD
LSRGSEPTPVELCLQEEGVRPEDFRYRKERWPHGCFLSSGPLFTTCCDCTDGCGDAESCA
CACLTPGGKHYSHQRLSEHVPKGLYECGPWCGCDRGMCQNRVVQRGLRVRLQVFPTGNKG
WGVRCRDDLDRGTFVCTYAGVVLRAGLDSDEPLPPKRQKEDLPSDDEVEVVDEWLAPAGE
GRAPAETLEPSPPSTPPDGLHVPVIQRPGVELSPQIQAVLVGNSLPVQPLTGMEVEEGVE
QENGVQKPQLNSQPHMKEVDVKMSVSTSPKKLGPKQNPMEHLYYIDATKEGNVGRFINHS
CDPNLFVQNVFTDSHDPNFPVIAFFTSKVVKAGTELTWNYSHSPDSDLEQKVTCQCGCDG
CQGLLA
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggatgggtcagagaaaacagaagttgcgagggcaaagtcattctgggtacaggtggac
gtggaagaaacatttgatgagctgtatgaatatctgacacacctgaagcatgccatcaag
acctgcactgctacagacagagaatatgtccaggggatgaatatgattaccttattggat
tccgggctgattgtgacaccggcaactacagccccagctacaactacagccccagctaca
actacagccccagctactactacagcccctgccactgggaatgagtcttttgtggaggtg
gttattggtgcagaaatcctcacagtttcagtccctgacattgacgaccctcagactcca
ctgcccccccaacagacagagcccgtatcccctccctcacccctccgttacgatggctcc
atcatccccctgtcgcccccctaccccaacagagaggacctcatgactcccctgctgccc
ctccagctcccctaccagttccatacctgcagccaggcctgtgtgccccacctgcccccg
tccgcacaccacttccggggccacaaccctctcaggatcccactactctgctccttccag
cggcagtgtgctcccaccccacctctcactactgggattgagaccgattgtgatgggact
gaaccagactctaagggggagggctctgaaaattctgagggtgcagagttggactctgag
gtcaccgcgcggggtgttgtttacaaggctccctgtgggctgagtctctgcaccccaggg
gaggtgctatgttttctggttgccacagagagtcacagcgttctgcaggtggacgacttc
acctttgaccccctggtgcagttggagtgtctgcgcccacccgggctggctgtgagggac
ctgagccgggggtcagagccaacgccggtggagttgtgcctgcaggaggaaggagtgcgg
ccggaggacttccgctacaggaaggagcgttggcctcacggctgtttcctcagttcgggc
ccgctgttcaccacctgctgcgactgcactgatggctgtggtgatgcggagagctgcgcc
tgcgcttgtctgaccccaggcggaaaacactactcccaccagaggctgtctgagcatgtg
cccaaagggctgtacgaatgcggtccttggtgtgggtgtgaccgtggtatgtgccagaac
cgtgtggttcagcggggtctgcgtgtccggctgcaggtcttccccaccggaaacaaagga
tggggggtgcgttgccgtgacgacctggacaggggcacgttcgtgtgcacatacgcaggt
gtagttctcagggcaggactggactccgatgagcccctcccacccaagcgccagaaggag
gaccttccctccgacgacgaggtggaggtggtagatgagtggctggcgccggcaggggag
gggcgagcacctgcagagaccctggagccctcgcccccctccacaccacctgacgggctt
catgtgcctgttatccagaggcccggggtggagctttctccacagatacaagctgtgttg
gtgggaaactccctgccagtccaacctctcacgggcatggaggttgaggagggtgtggag
caagagaatggggtacagaagccacagctgaattcccaaccacacatgaaagaagtggat
gtgaagatgtctgtgtccacaagccccaaaaaacttggcccaaagcagaaccctatggag
cacctgtattacatagatgccacgaaggaggggaacgtgggaaggttcataaatcacagc
tgcgaccccaacctatttgtgcagaacgtcttcactgactctcatgatccaaacttcccc
gtcatcgccttcttcaccagcaaagtggtgaaggcggggactgagttgacctggaactac
tcccacagccctgacagtgacctggaacagaaagtgacatgtcagtgtggctgtgacggc
tgtcagggactgctggcctga
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integrated database retrieval system
