Opisthocomus hoazin (hoatzin): 104339622
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Entry
104339622 CDS
T08436
Name
(RefSeq) LOW QUALITY PROTEIN: pinopsin-like
KO
K04251
long/medium wavelength-sensitive opsin
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
oha04030
]
104339622
G protein-coupled receptors [BR:
oha04030
]
Rhodopsin family
Vision
Opsin
104339622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srsx
7TM_GPCR_Srw
7tm_4
TctB
7TM_GPCR_Sru
Motif
Other DBs
NCBI-GeneID:
104339622
NCBI-ProteinID:
XP_009944097
LinkDB
All DBs
Position
Unknown
AA seq
349 aa
AA seq
DB search
MDSSNHSQEPLHTGTPGPFDCPQWPHQAPRASHVXVAVLMGIVVVSALVVNGLVIVVSIR
YKKLRSPLNYILVNVAVADLLVTLCGSSVSFSNNINGFFVFGKRMCELEGFMVSLTGIVG
LWSLAILAFERYVVVCRPLGDFRFQHRHAVSGCAFTWSWSLLWTTPPLLGWSSYVPEGLR
TSCGPNWYTGGSSNNSYILSLFVTCFVMPLGLILFSYANLLMTLRAAAAQQQDSDTTQQA
EREVTRMVIAMVMAFLVCWLPYTTFALVVATNKDIAIQPALASLPSYFSKTATVYNPIIY
VFMNKQFQSCLLKMVSCGHHAGGTGKATPAAPGPRADGLRNKVTPSHPV
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggactcctccaaccactcgcaggagcccctgcatacggggaccccggggcctttcgat
tgcccccagtggccccaccaggccccccgggcctcgcatgttnnggtggccgtgctgatg
ggcatcgttgtggtctcggccttggttgtgaatggcttggtcattgtggtttccatcagg
tacaagaagctccgatcacccctgaactacatcctggtgaacgtggctgtggccgacctg
ctggtgacgctctgcggcagctctgtcagcttctccaacaacatcaatggcttcttcgtg
tttggcaagcggatgtgcgagctggagggcttcatggtctccctgacaggcatcgtgggg
ctgtggtccctggccatcctggccttcgagcggtatgtggtggtctgcagacccctggga
gactttcggttccagcatcggcacgccgtcagtggctgtgccttcacatggagctggtca
ctgctctggacgaccccaccgctcctgggctggagcagctacgtgcctgaaggtctgaga
acctcttgcgggcccaactggtacacgggtggcagcagcaacaacagctacatcttgtcc
ttgtttgtcacctgcttcgtgatgcccctcggcctgattctcttctcctacgccaacctg
ttgatgaccctgagagcggctgcggcgcagcagcaagactcggacacaacacagcaggcg
gagcgggaggtgacgcgcatggtgatcgcgatggtgatggccttcctcgtctgctggctg
ccctacaccacgtttgcgctggtggtggccaccaacaaggacatcgccatccagccagcg
ctcgcatccctgccctcctacttctccaagaccgccacggtttacaatccaatcatctac
gtcttcatgaacaaacagtttcagagctgcctgctgaaaatggtgagctgcggtcaccac
gccggggggacaggaaaagccactccagctgcccccggcccccgtgcagatgggctgcgg
aataaggtgacaccgtcccaccccgtctaa
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