Oceanobacillus jeddahense: NP439_16430
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Entry
NP439_16430 CDS
T08779
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ojd
Oceanobacillus jeddahense
Pathway
ojd00300
Lysine biosynthesis
ojd00550
Peptidoglycan biosynthesis
ojd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ojd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NP439_16430
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NP439_16430
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ojd01011
]
NP439_16430
Enzymes [BR:
ojd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
NP439_16430
Peptidoglycan biosynthesis and degradation proteins [BR:
ojd01011
]
Precursor biosynthesis
Amino acid ligase
NP439_16430
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
UUI01630
LinkDB
All DBs
Position
complement(3344022..3345503)
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AA seq
493 aa
AA seq
DB search
MRLKELLDGIGFYQTTDSIEDINVVNVEMDSRKVEAGSLFVCIEGYTVDGHDFLQQAIDK
GAAAAVISKEVNVKGDLPLIRVKDTGRALAMLSAAYYDYPTTQFPLIGVTGTNGKTTTTY
LLDTIFEKQGKKSGVIGSIQVKIGNETFPVVNTTPDALELNRIFHQMQEKEADQVIMEVS
SHALDMGRVFGCDYDIGIFTNLSQDHLDYHKDMDDYLRAKSMLFAGLGNDYRPGKKKYAI
INEDDASSDLLKRSTAQQVLTYSCKQEADIMAKNIMLSPAGVAFNLVTPIGTTHIKTNLI
GMFNVYNMLAASSAAIASNVGLDVIKEALENTKGVDGRFEPINEGQDYSVIVDFAHTPDS
LENVLQTSREFAKRKVYVVVGCGGDRDRTKRPLMADVAMKYADHALFTSDNPRTEDPVQI
LEDMTGHLTEEEATFEVIADRTEAIKHAVKLAQTDDIILIAGKGHETYQIIGQTKYDFDD
RQIAREAIKEKGE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagacttaaagaactattagatggaataggattctatcaaacaacagattccatagag
gatataaatgttgtaaatgtagaaatggactccagaaaagtagaagcagggagcttattt
gtgtgtattgaaggttataccgtagacggtcatgattttcttcagcaagcgatagacaaa
ggagctgctgccgcagttatttccaaggaagttaacgtcaaaggagatcttccgcttatt
cgggtgaaagatacagggcgtgccctggcgatgctctcggccgcatattatgattatcca
acaactcaatttccgttaatcggtgttaccggaacaaacggaaaaacgacaacaacttat
ttattagataccatttttgaaaaacaaggtaaaaaatctggtgtcattggcagtattcaa
gtgaaaattgggaacgaaacatttccagtagttaatacgacacctgatgcattagagtta
aaccgcatctttcatcaaatgcaggaaaaagaggcggatcaagttattatggaagtttct
tcgcatgctttagacatgggaagagtttttggctgtgattatgatattggcatttttaca
aatttatcgcaagaccatcttgactaccataaagatatggacgactatttaagagcgaag
agtatgctatttgctggtttgggaaatgattatcgtccaggtaagaaaaaatacgctatt
attaatgaagatgatgcttcaagcgatttattaaaacgaagtacagcacaacaagtgctt
acctacagttgcaaacaggaagctgacattatggccaaaaatattatgttatctccagcg
ggtgtagcatttaatttggtgactccgattggcacaacccatattaaaacgaatttaatc
ggcatgtttaatgtgtataatatgcttgcggcaagcagtgctgcaattgcatctaatgta
ggattagatgtgattaaagaagccctggagaatacgaaaggagtagatggccggtttgaa
ccaattaatgaaggacaggattactccgtgattgtagatttcgcgcatacacctgattct
ttagaaaatgtgcttcaaacgagccgtgaatttgcaaagcgtaaagtgtatgttgtcgtt
ggttgcggaggagatagagaccgtaccaaacgtccattaatggcagatgttgctatgaaa
tatgctgaccatgcattatttacatctgacaatccacgtacagaagacccggtacaaatc
ttagaggatatgacaggtcatttaaccgaagaggaagcaacctttgaagtaattgcggac
cgaacagaggcaataaaacatgcagtaaagctcgcgcaaacagatgatattattttaatt
gcaggtaaaggacatgaaacctatcaaattattggtcaaacgaaatatgattttgatgat
cgccagattgcccgggaagcaattaaagagaaaggggagtaa
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