Oncorhynchus keta (chum salmon): 118358797
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Entry
118358797 CDS
T09424
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118358797
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
118358797
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
GAS
Motif
Other DBs
NCBI-GeneID:
118358797
NCBI-ProteinID:
XP_052337077
EnsemblRapid:
ENSOKEG00005049518
LinkDB
All DBs
Position
26:complement(40841449..40894366)
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AA seq
1201 aa
AA seq
DB search
MIDDGGEYRGGDKDTNKKSAGIRLKPLLLPGSPPPASSSKRNRDRDPKSGTAGDLETDVA
VKTNLNGDCRLFRGNRSSITGQHTIGSDPAEQRRLIPEVDAGANEESYTGGETGSGAEQG
AQDSVGRSASAHRRSSVFDHSTLIKLEGTEPIMPDEVEQLYRAGFMHRQFGAMLQPGVNK
FSLRMLGSERAVEHERERVKSAGFWIIHPYSDFRFYWDLIMLFLMVGNLIIIPVGITFFK
DEHTPPWIVFNVISDTLFLIDLVLNFRTGIVKEDNTEIILDPQTIKIKYLKSWFMVDFIS
SIPVDYIFLIVETRIDSDFYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMT
YDLASAMVRIVNLIAMMLLLCHWDGCLQFLVPMLQEFPSDCWVTRNKMVNDTWGQQYSYA
LFKAMSHMLCIGYGMYPPVGLADVWLTILSMIVGATCYAMFVGHATALIQSLDSSRRQYQ
EKYKQVEQYMSFHKLPAGMRQRVHDYYEHRFQGKMFDEESILGELNEPLREEIVNFNCRK
LVASMPLFANADPNFVTSMLTKLRFEVFQPMDNVVMEGTVGRKMYFIQHGVVCVIAKGTK
ETKLSDGSYFGEICLLTRGRRTASVRAETYCRLYSLSVDNFNEVLEEYPMMRRAFETVAL
DRLDRIGKRNSVLQHKVAQNSGTVNLQENEIIQRIVQHDRDMAIQSNISPQSLNLPSSTS
GVIWAPLVQGPLQAAAATTSLALAFSHSQLQAQLPPILFHHPLPVSRSFKDPGGHRLERG
VFVGVSAAGGMGVPGCGSGAASPAGSVKFRSGVDTPILASFRAQHLVSTSSSSMSPLSPM
TSMYQPTTTTNFQAQPSGGSPFLLGQASIQGYPSSSSYAAQLHHHHHPYSPPSSQQQGAS
GRPTMDLGRFSAPSGSTLSPLICSSVSPILSQLQQHDSSSSHATSSQQVQRGMGSGEHQE
RAYSHFSYASTSPSYTTQNHSSSGFLSIPIPQQASFGGGGASSSLVHHSLAGLQSSLHPT
LHSGLHPGLHAGLLPQVLPVDSAHSSPSALASLAQYGSGDGSPSCTPPVAPSPTIQSPLT
GRTVLHHHHHSQLSHLSQLHSQPSSAMGSHSSLTPQTSCPVRVDERGQRAESLVDLFTQD
RVAVINSHVTPLSHYTPSGSELPTPVNQGAPTSSHPNPSHPATPAKTSEAEYRLPELPSN
L
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgattgacgacggaggagaataccgtggtggcgacaaggacacaaacaagaaaagtgcc
ggtatcaggctgaagcctcttctccttcctggatctcctccccccgctagcagctctaag
agaaacagagacagggacccaaagagcggaaccgccggagacttggaaacggacgttgcc
gttaagaccaacttaaacggggactgtcgcctttttagaggtaaccgctcttccatcact
ggtcagcacactattggatcagatccagcggagcagcggaggctgatccccgaggtagac
gccggcgctaacgaggagagttacaccggaggagagactggttctggggccgaacaggga
gcgcaggattccgttggtcgcagtgctagcgcacaccgccgctcgtccgtcttcgatcat
tccactttaatcaagttagaaggaaccgaaccgatcatgccagacgaagtagagcagttg
taccgggcgggtttcatgcaccggcagttcggagcgatgctacaaccaggagtcaacaag
ttctctctgagaatgttggggagcgagagggccgtggagcacgagagggaacgcgtgaag
tctgcaggattctggatcattcatccgtacagtgattttaggttctactgggacctgata
atgctgttcctcatggtggggaacctcatcatcatacctgtgggcatcaccttcttcaag
gacgagcacactcccccctggatcgtcttcaacgtcatatcagacaccttgttcctcatc
gacctcgtcctcaacttccggacgggcatcgtcaaggaggacaacacagagatcatcctg
gacccacagaccatcaagatcaaatatctgaagagctggttcatggtggacttcatctcg
tccataccagtagattacatcttcctcatcgtggagaccaggatcgactcagacttctac
aagacggcccgggcgctgagaatcgtgcggtttaccaagatcttgagtttgttgaggttg
ctccggctgtctaggctcatcagatatatacatcagtgggaagagattttccatatgacc
tatgacctagccagtgccatggtgaggattgtgaatctgattgctatgatgctgctgctg
tgtcactgggacggatgtctgcagttcctggttcccatgctgcaggagttcccctctgac
tgctgggtcaccaggaacaagatggtgaatgacacgtggggccagcagtattcctatgcc
ctgttcaaagctatgagtcacatgctgtgtatcgggtacgggatgtaccctcctgtgggc
ctggcggatgtgtggctcaccatactcagcatgatcgtgggtgccacctgctacgccatg
tttgtaggccatgcaaccgctctcattcagtcactggactcttcccgacggcagtaccag
gagaagtataaacaggtggagcagtacatgtctttccacaagcttcctgccggcatgcga
cagcgtgtccatgactactatgaacatcgtttccagggcaagatgtttgacgaggagagc
attctgggggagctgaacgaaccgctcagagaggagattgtcaacttcaactgtcgtaag
ctggttgcttcaatgcctctgtttgccaacgccgaccccaactttgtgacgtcaatgctg
accaagctgcgttttgaggtgttccagcctatggataatgtggttatggaagggacagtt
ggcagaaagatgtacttcatccaacacggggtggtctgcgtcatcgccaagggcaccaag
gagaccaagctgtctgacgggtcctactttggagagatctgcctgctgactcgaggcaga
agaacagccagtgttcgcgctgagacatactgccggctgtactctctgtctgtggacaac
tttaacgaggtcctggaggagtaccccatgatgagacgggccttcgagaccgtggctctg
gaccggctggaccgcataggaaagaggaactctgtgctccaacacaaagtcgcccagaac
tcaggaactgtgaacctccaggagaatgagatcatccagaggatcgtacagcatgaccgt
gacatggctatccagagcaacatctctccccagtccctgaacctcccatcctccacctca
ggggtcatctgggctcccctggtccagggccccctccaggccgctgcagccaccacatcc
ctggctttggccttctcccactcccagctccaagcccagctccctcccatcctcttccac
catccgctccccgtctcccggtcgttcaaggatccaggaggccaccgtttagaaaggggc
gtgtttgtgggcgtgtctgcagctggaggtatgggcgttcctggctgtggctccggggct
gcatctccggccggttctgtgaagttccgttctggagtggacactccgatattagcttcg
tttcgggcgcaacatctagtctccacctcctcctcctccatgtctcctctgtcacctatg
acctccatgtaccagcccaccaccaccaccaacttccaggctcagcccagcggaggctct
cccttcctcttgggccaggcctcaatccaggggtatccgtcctcctcctcctacgcggcc
cagctccaccaccaccaccacccctacagcccaccaagttcccaacagcagggggcatca
ggaagacccaccatggacttgggaaggttctcagccccctctggttccaccctaagccct
ctcatctgtagctctgtcagccccatcctgagccagctacagcaacacgactcctcttcc
tctcacgctaccagctctcagcaggtccagagggggatgggctctggtgaacatcaggag
agagcatactcccacttttcctacgccagcaccagccctagctacaccacccaaaaccac
agctccagtgggtttctatcaatacctatcccacaacaggccagctttggaggtggtgga
gcctcatcctccctggtgcatcacagtctggcgggtctgcagtccagcctccatcccacc
ctccactctggcctccatcctggtctccacgccggcctcctccctcaggttctcccggtg
gactctgcccattcatccccctctgccctcgcctcgctggcccagtacggatcaggggat
ggctccccgtcctgcaccccaccggtggcacccagccccaccatccagagcccactgaca
ggaaggacggtgcttcaccatcatcaccacagccaactcagccatctcagccagctccac
agccaaccctccagcgccatgggctctcacagttccctcaccccacagacgtcatgcccc
gttagggtagatgaaagggggcagagggcagagtccttagtggatctcttcacccaggat
agggtagcagtaataaactcccacgtcacacctctgagtcactacactccctcgggatct
gaacttccaactcctgtgaaccaaggagcaccgacctcttcacatcccaaccccagtcat
cctgctaccccggccaagacatccgaggcagagtacagactccccgaactcccctccaac
ctgtga
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