Oncorhynchus keta (chum salmon): 118359577
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Entry
118359577 CDS
T09424
Name
(RefSeq) zinc-binding protein A33-like
KO
K12012
tripartite motif-containing protein 35
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118359577
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118359577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-B_box
zf-C3HC4_4
zf-C3HC4_3
zf-RING_2
U-box
zf-Nse
zf-RING_5
zf-RING_6
DUF4618
RE_Alw26IDE
PEHE
BLYB
DUF4874
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
118359577
NCBI-ProteinID:
XP_052337777
EnsemblRapid:
ENSOKEG00005041111
LinkDB
All DBs
Position
27:16666531..16677339
Genome browser
AA seq
473 aa
AA seq
DB search
MASKASLSEDDFSCPVCCDIFKDPVVLLCSHSFCKACLEEYWKQKTSRECPVCRKKSSME
FLPSNLVLKNLCEAYLHDRSQRASAGPEVLCSRHSEKLKLFCLEDKQPICFVCQTSKKHK
SHDCCPIDEAVLDHKEELKTALEPLQEKMKVFREVKLSCDQTANHIKSQAQHTERLIKMG
FKKLHQFLYHEERARIAELKEEEEQKSQMMKKKIEKMSREISSLSDTIRTIEEELGAEDI
SFLQNYKDTVKRAQCTLPDPERVSGALIDVAKHLGNLPFRVWEKMQGIVHYTPLTLDPNT
SHPHLILSDDLTSVRYSDEEHQLPDNPERFDEEETVLGFEGFNSGTHSWDIDVGENMYWY
LGVITESVQRKGDSGLWDGSWGMLFGGGDYKTHVPKQPLTPLTVRQNPQRIRVQLDWEGG
KLSFSDPVSNTHLHTFTHTFTERVLPFICTGFCPLPLRVLPGKVTVSVDTVSV
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcctctaaagcttctctctccgaggatgatttctcctgtccagtatgctgtgacatc
ttcaaggatcctgtggtcctgttgtgtagccacagcttctgtaaggcctgtctggaggaa
tactggaaacagaagacatctcgggaatgtccagtctgcagaaagaaatcatcaatggaa
ttcctccccagtaacctggttttaaagaacctgtgtgaggcctacttacacgatagaagc
cagagagcttcagcagggcctgaggtgctctgcagtcgacacagtgagaaactcaagctc
ttctgtctggaggataaacagcccatctgttttgtgtgtcaaacttccaaaaagcataaa
agccatgactgctgcccaatagatgaagctgtactggatcataaggaggaactcaagact
gcactggagcccttacaggagaagatgaaggtcttcagagaagttaaactgagctgtgat
caaacagccaaccacatcaagagccaggcccagcacacagagaggctgattaagatgggg
tttaagaagttgcatcagtttctatatcatgaagagagagccaggatagctgaactgaag
gaggaagaggagcagaagagtcagatgatgaagaagaagattgagaagatgagcagagag
atatcatcactttcagacacaatcagaaccatagaagaagagctgggagctgaggacatc
tcattcctgcagaactacaaggatacagtgaaaagagcccagtgtacactgccagatcca
gagagggtttcaggagcgctgatcgatgtggcaaagcacctgggaaacctgccgttcaga
gtctgggagaagatgcagggaatagtccactacactccattgactctggaccccaacact
tcccacccacatctcatcctgtctgatgatctgaccagtgtgagatacagtgatgaggaa
catcagcttcctgacaacccagagaggtttgatgaggaagaaactgtcctgggttttgag
ggttttaactcaggaacacacagctgggacattgatgttggggagaatatgtactggtac
ctgggtgtgatcacagagtctgtccagaggaagggagacagtggactttgggatggatcc
tggggtatgttgtttggtggtggtgattataaaacgcatgtaccaaagcagccactcact
cccctcacagtgagacagaatccccagaggatcagagtgcagctagactgggaaggagga
aagctgtcattctctgaccctgtcagtaacacacatctacacacattcacacacactttc
actgagagagtccttccattcatctgcactggcttttgtcccctccctctcagggtttta
ccagggaaggtgactgtatcagtggatactgtctctgtctga
DBGET
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