Oncorhynchus keta (chum salmon): 118364228
Help
Entry
118364228 CDS
T09424
Name
(RefSeq) serine/arginine-rich splicing factor 1B
KO
K12890
serine/arginine-rich splicing factor 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03040
Spliceosome
oke05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118364228
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118364228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118364228
Spliceosome [BR:
oke03041
]
Common components
Common spliceosomal components
SR proteins
118364228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
118364228
NCBI-ProteinID:
XP_035601516
EnsemblRapid:
ENSOKEG00005004538
LinkDB
All DBs
Position
1:28846907..28855796
Genome browser
AA seq
258 aa
AA seq
DB search
MSGGVVRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFIEF
EDPRDADDAVYGRDGYDYDGYRLRVEFPRSGRGGGRGGFGGGGGGGGGGGVGGAPRGRYG
PPSRRSEYRVIVSGLPQSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVR
KLDNTKFRSHEGETAYVRVKVDGPRSPSYGRSRSRSRSRSRSRSAASRSRSNSRGGGTRG
GRGSPRYSPRHSRSRSRS
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaggcgtcgtgcgaggccccgcaggaaataacgattgtcgaatttatgtcgga
aatctacctcctgatattcgcactaaagatgttgaggacgtgttctacaaatacggagct
attcgagacatcgatttgaaaaatcggagagggggacctccctttgccttcatcgaattt
gaagatcccagggacgcagacgatgcagtgtacggacgagacggctatgactacgacggt
tatcggctgcgagttgaattccctcggagcggaaggggtgggggaagaggcggctttggt
ggtggtggtggtggcggtggtggcgggggggttggtggcgctcctagaggcagatacggg
ccgccatccagacgctccgagtatagggtcattgtctcagggcttccccagagtggcagc
tggcaggacctcaaggatcacatgcgtgaggctggggatgtatgttatgctgacgttttc
agagatggaactggggttgtggagtttgtgcgcaaagaagacatgacctacgctgttcga
aagctggataacaccaaattccgatcacacgagggagagaccgcatacgttcgcgtgaaa
gtagatggtccccgcagcccgagctatggaagatcccgttccaggagccgcagtcgaagc
aggagccgcagcgcagccagtcgcagccgcagcaactctcgcggtggtggtacccgtggt
ggcagaggatctcctcgctactctccacgccatagccgctctcgctcccgttcctaa
DBGET
integrated database retrieval system
