Oncorhynchus keta (chum salmon): 118364382
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Entry
118364382 CDS
T09424
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2-like
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118364382
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oke03310
]
118364382
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118364382
Nuclear receptors [BR:
oke03310
]
1. Thyroid hormone like
1D. Rev-Erb
118364382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
118364382
NCBI-ProteinID:
XP_035601775
EnsemblRapid:
ENSOKEG00005048647
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All DBs
Position
31:complement(10226048..10235152)
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AA seq
596 aa
AA seq
DB search
MGSIKPGGVIAYISSGSASSPECCLSDSCSSGYLCSSPPHPSLPTRAVGIMVDIASPTTA
KHPRSHGTDKTGRSTSTKSSITKINGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQ
HSIRYKKCLKMENCTVIRINRNRCQQCRFKKCLAVGMSRDSVRFGRIPKREKQRMLLEMQ
NAMNNMMMNNNSQLHSMFHGTQSPPCPMEGLPNDGSSSSSASSSSSISSSSGSNPSSPCS
AQDSMETSSSSASSCSSDSGDDEVPPSRVCHQGTFTYRREQQQSIKEEPEESPSPVARET
VKDRRDSPMEELQESWKRCDQDTRGYQPSCNSHQHVTNGPYREERVVYQQQPAQLNSAPS
GRMPEDSYSLHHRSHNIMHNIQTVSNGYSRPSYSLQDHKTNMVTPSLYVDPSQRSQEIWE
EFSLSFIPAVREVVEFAKRIPGFRDLSEYDQVSLLKNGTFEVLMVRFASLFDVAERTVTF
LTGKCYSLELLRSQRTGQLFTSMCDFSEKLAALQLDKDEMSLFIAVVLVSADRSGIQDLK
SVEALQDTLIRALRSLIMTNHANETTTFTKLLLKLPELRSLNNIHSEELLAFKVHS
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgggctcaatcaagcctggtggtgtaatagcctacatctcttctggctccgcctccagc
ccagagtgctgtttgagtgacagctgcagcagcggctacctgtgctcctctccgcctcat
ccctcactgccaacccgggcagtaggaatcatggtggacatcgccagccctaccacagcc
aagcacccacgtagccacggcacagacaagactgggcgatccacctccaccaagagcagc
atcaccaagatcaacggcatggtgttgttgtgtaaggtgtgcggcgacgtggcctcgggg
ttccactatggcgtccacgcctgcgagggctgcaagggtttcttcaggaggagcatccag
catagcatccggtataagaagtgcctgaagatggagaactgcaccgtcataaggatcaac
aggaaccgctgtcagcagtgccgcttcaagaagtgtctggctgtgggcatgtctagagac
tctgttaggtttggccgcatcccaaagagagagaagcagcgcatgctgctggagatgcag
aacgccatgaacaacatgatgatgaacaacaacagccagctccacagtatgttccacggc
acccagagtccaccctgccccatggaagggctccccaatgacggcagctcctcttcatcc
gcctcttcttcctcctctatctcgtcttcatcaggctccaacccttcctcaccctgttcc
gctcaagactccatggagaccagctctagctccgcctcttcctgttcatcggatagcggc
gatgacgaggttcctccttccagggtgtgtcaccagggcacattcacgtaccgccgtgag
cagcaacagtccatcaaagaggaaccggaggagtcaccttcaccggtcgccagggaaact
gtaaaagacaggagagacagccccatggaggaactgcaggagagctggaaacgctgcgac
caagacaccaggggttaccaacctagttgcaacagccatcaacacgtcaccaacggtcca
tatcgggaagagagagttgtttaccagcagcagcctgcgcagctaaacagcgcccccagt
ggtagaatgccagaagattcctacagcctacatcacaggagccacaacataatgcacaac
atacagaccgtctccaatggttacagtagaccatcatacagcctacaggaccataagaca
aacatggtcactcctagtctctatgtggaccccagccagcgcagccaggagatctgggag
gagttctccctgagtttcatcccggccgtgcgcgaggtggtggagtttgccaagaggatc
ccgggcttccgagacctctccgagtacgaccaagtcagcctgctcaaaaacggaacattt
gaggtgcttatggtgcgcttcgcttctctgttcgacgtggccgagcgcaccgtgaccttc
ctgacggggaagtgttacagcttggagctgctgcgctcgcagcggaccgggcagctgttc
acctccatgtgtgacttcagcgagaagctggccgctctgcagctggacaaggatgagatg
agcctcttcattgctgtcgtcctcgtctccgccgatcgttcggggatccaggacttgaag
tcagtggaggcgctgcaggacacgctgatccgagcgctgcggagtctgatcatgacgaac
cacgccaacgagactaccaccttcaccaagctgctgctgaagctgcccgagctgcgctcc
ctcaacaacatacactctgaagaactgctagccttcaaagtgcactcgtaa
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