Oncorhynchus keta (chum salmon): 118365896
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Entry
118365896 CDS
T09424
Symbol
rab11fip3
Name
(RefSeq) rab11 family-interacting protein 3 isoform X2
KO
K12485
Rab11 family-interacting protein 3/4
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118365896 (rab11fip3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118365896 (rab11fip3)
Membrane trafficking [BR:
oke04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
118365896 (rab11fip3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
EF-hand_9
ZapB
2-thiour_desulf
Tweety
Motif
Other DBs
NCBI-GeneID:
118365896
NCBI-ProteinID:
XP_035604092
EnsemblRapid:
ENSOKEG00005031651
LinkDB
All DBs
Position
3:complement(10260136..10309984)
Genome browser
AA seq
1075 aa
AA seq
DB search
MEQTLMSSPLGHSEWDPEGTSSHGFILLDSNKGAIMPQRKGGQTALDFQKVDQDVSLCLE
ELFQENALNLDSLFRTSSYSGGDKILPWEGDQANHSQDVPLDKPLELLPLKDKIVEHNNV
SDSPLPWLLFSKTTDLLRDNSVCEELNSLQDPPVSYTDSVNSHKELITLSEPPSPVKVSD
RTPDTHTQASSLLVDHLSSENFTFSPSPAPSGEVNPQGVSKELLLLSLDEDSGFPPPLQG
GETVSPETGDKGLFLEPVTDLPTVSNSTPEGLPESSFSHNNIHTDCARESPGVQVGSVPL
LDLEVPDCDSSLSLCPTPLESPTCTGASPAEDSEQEHTLATSILTLSEHRGEGDSSLLLN
SSPSIEPPSSKFLSNRDASDLGQLPSGCSSEENGPQDLMEDNIIFDFTKHEGEEEMALDQ
CLTSDVLPDEETWDLKLPEAVQGDSVPALQTEQRNGERLADLDLFAGTTGCHKRDSFDCP
VLELNGLSSDSGWTSEQTVETLSLSKMVGCDSMVPIVNQREEDPSPLKAVFDALDQDGDG
FVRIEEFMEFAAAYGADQVKDLTKFLDPSGLGVISFEDFHRGISAISNGGTEPQLYDVHF
SPGDGAVGCSEEYDEQNEVTDSAYLGSESTYSECETFTDEDTGALVQPEMHEDVETDSGI
EATLHDPEDSSNRFSLSSELNSHTLVTVIGGDEEHFEDFGESNTSELLLNTTEEGTEGEG
DSSHLQTPDQSNCSSLLLSPSSSKRLSSKKVARHLLQNSSMTLDSMSELSRDILDLADTD
ITDKVLLLERRVAELEKDSEASGEQHARLRQENLQLVHRANALEEQLKEQELRAEDHLHQ
ETRRHKDALTKLERERGLELENLQARLQQLDEENSELKSCVPCYRANIERLEEEKRKLED
EVEDVTERMNEELETRRKTTDKLTHERHQNQKEKEHMQELIEDLRKQLEHLQLYKLEAEA
RRGRSPSAGLQEYQSRTREAELEQEIRRLKQDNRSLKEQNDELNGQIINLSIQGAKNLVT
ASFSESLAAEINSVSRGELMEAIRKQEDVNFRLQDYIDRIIVAIMESNPSMLEVK
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggaacagactctgatgtctagccctctggggcattctgagtgggatccagaaggcaca
agctcccatggattcatcctcttggattcaaacaaaggagccataatgcctcagagaaaa
ggtggtcagacagctttggatttccagaaagttgaccaggatgtatcgctatgcctggaa
gagcttttccaggagaacgccttaaatttagacagtcttttcaggacctccagttactct
ggtggagacaagattttgccatgggagggagatcaagctaatcattctcaagatgttccc
ctggacaaacctctagagttattgcctctcaaagacaaaattgtggaacataacaatgta
agtgacagtcctctaccttggctgttattctccaaaaccactgatttgctcagggacaac
tcagtatgtgaggaactaaattccctgcaagatccacctgtgagttacacagactccgtt
aacagtcacaaggagctgataaccctcagtgaacctccgtctcctgtgaaggtttcagat
aggactccagatacccacacacaagcttcctctttgttggtagatcacctctcttctgaa
aacttcaccttctcccccagccctgccccttcaggtgaggtgaacccacagggtgtcagt
aaggagcttttactcctgtcactggatgaggacagtggcttccctcctcccttacagggc
ggggagactgtgtcacctgaaaccggggacaaaggtttattcctggaacctgtgactgat
ctacccacagtcagtaacagtacccctgaaggtttacctgagagcagcttctcacacaac
aacatccatactgactgcgctagagaatctccaggggttcaggtgggatctgtgcctttg
ctggatcttgaggttcctgactgtgacagcagcctcagcctctgccctactcctcttgag
tcaccaacctgcacgggtgcatcacctgcagaggattcagagcaggaacacactttggct
acttcaatcctgactctatcagagcacagaggtgagggggattcgtccctccttctgaac
tcttcaccatcgattgaacccccgtcgtcaaagttcctctccaacagagatgcttcggac
cttggtcaactgcccagtggctgcagctccgaggagaatggcccccaagatttgatggaa
gacaatattatctttgattttaccaaacatgagggagaggaggaaatggctctggatcag
tgcttgacctcagacgtgctgcccgatgaggaaacgtgggacttgaaactacctgaggct
gtacagggtgacagtgttcctgccttacaaactgaacagcgcaatggggaaaggttggca
gacttggacctgtttgccggaaccacgggttgtcacaaacgtgatagttttgattgccca
gttctggagttgaatggtttgtcttctgattctggatggactagtgaacaaacagtagag
actctgtcactctctaaaatggttgggtgtgactccatggtacccatagtgaatcagaga
gaggaagacccatcacctctgaaggcagtgtttgacgctctggaccaggatggggatgga
tttgtacgcattgaggagtttatggagtttgctgctgcctatggggctgaccaggtgaag
gatctgaccaagttcctggatccaagtgggctgggggtgatcagcttcgaggacttccat
cgaggaatctcggccatcagcaatggagggacagagccccagctctacgatgtgcacttc
agcccaggggacggagccgtgggctgctcagaggagtacgatgagcaaaacgaggtgaca
gatagtgcatacctgggctcggagagcacttacagcgagtgtgagacattcaccgacgag
gacacgggagccctggtccagcccgagatgcacgaggatgtggagacggacagcggcatc
gaggccacgctccacgacccagaggacagtagcaacaggttctccctgagctctgagttg
aacagccacaccctggtgacagtgattggcggggatgaggaacattttgaggactttggg
gagagcaacacctcagagctgctgctgaacaccactgaggagggaaccgagggagagggg
gactcatcccacctccagacccccgaccagagcaactgctcctccctgctactctctccc
agctccagcaagaggctgtccagcaagaaagtagcacgacacctcctccagaacagctcc
atgacgctggacagcatgagtgagctgtcccgggacatactggacctggctgacaccgac
atcactgacaaggtgctcctgctggagcgtcgcgtggcggagctggagaaggactcggag
gctagtggggagcagcacgcacgcctccgccaggagaacctgcagctggtgcaccgggcc
aacgccctggaggagcagctcaaggagcaagagctccgcgctgaggaccacctgcaccag
gagacccgccgccacaaggacgccctcaccaagctggagcgggagaggggcctggagctg
gagaacctgcaggctaggctgcagcagctggatgaggagaacagtgagctgaaatcctgt
gtgccctgttaccgcgccaacatcgagagactagaggaggagaagaggaagctggaagac
gaggtggaggacgtgacggagcggatgaacgaggagcttgaaacccggaggaagacgacc
gacaaactgacccacgagcgccaccagaaccagaaggaaaaggagcacatgcaggagctg
attgaggacctgcggaagcagttggagcacctgcagttgtacaagctggaggcagaggct
aggagaggacgctctcccagtgccgggctgcaggagtaccagagccgcacccgcgaggcc
gagttggagcaggagatccgacgcctcaagcaggacaaccgcagtctgaaggagcagaac
gatgagctgaacggccagatcatcaacctgagcatccagggagccaagaacctggtgacg
gcctccttctccgagtcgctggctgccgagatcaactctgtgtcccggggagagttgatg
gaggccatccgcaagcaggaggacgtcaacttccgactacaggactacatcgaccgcatc
atcgtggccatcatggagtccaacccctccatgctggaagtcaagtag
DBGET
integrated database retrieval system
