Oncorhynchus keta (chum salmon): 118367550
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Entry
118367550 CDS
T09424
Symbol
usp22
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 22 isoform X1
KO
K11366
ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:
3.4.19.12
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oke01002
]
118367550 (usp22)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
118367550 (usp22)
04121 Ubiquitin system [BR:
oke04121
]
118367550 (usp22)
03036 Chromosome and associated proteins [BR:
oke03036
]
118367550 (usp22)
Enzymes [BR:
oke01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118367550 (usp22)
Peptidases and inhibitors [BR:
oke01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118367550 (usp22)
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
118367550 (usp22)
Ubiquitin system [BR:
oke04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118367550 (usp22)
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
118367550 (usp22)
SLIK complex
118367550 (usp22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-UBP
ISG65-75
Peptidase_C98
DUF6529
Motif
Other DBs
NCBI-GeneID:
118367550
NCBI-ProteinID:
XP_035607035
EnsemblRapid:
ENSOKEG00005012966
LinkDB
All DBs
Position
3:15469694..15502837
Genome browser
AA seq
534 aa
AA seq
DB search
MSPAGCPHVNGFKVDNWKQNLRVIYQCFVWSGSAETRKRKAKSCICHMCGAHLNRLHSCL
SCVFFGCFTKKHIHEHAKSKRHNLAIDLLYGGIYCFVCQDYIYDKDMEQIAKEEQRKAWK
LQGVGEKYSTWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHT
PLLRDFFLSDRHKCEMQSNSCLVCEMSQLFQEFYSGHRSPHIPFRLLHLVWTHARHLAGY
EQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNNCNCIIDQIFTGGLQSDVTCQVCHGVS
TTIDPFWDISLDLPGSSTPFWPLSPGGDGSTLNGESHLSGATTLTDCLRRFTRPEHLGSS
AKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKIPTYVSFPLELDMTPFM
ASSKESRMNGQYQQSVDVFNNDNKYSLFAVVNHQGTLESGHYTTFIRQHKDQWFKCDDAV
ITKASIKDVLDSEGKGSCVIKNGILQDSIVGNVRVDWNPERTKHVHQKVPLVLP
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgagtccagccgggtgcccccatgtgaacggtttcaaagtggataactggaaacagaat
ctacgggttatttaccaatgctttgtgtggagtggatctgccgaaaccaggaaacgcaag
gccaagtcgtgtatctgtcacatgtgcggcgcccacctgaaccggctccactcctgcctc
tcctgcgtcttcttcggctgcttcaccaagaaacacattcacgagcacgccaaaagcaaa
cgacacaatctagctatagatctactgtacggcgggatatactgctttgtgtgccaagac
tacatatacgacaaagacatggaacagattgccaaagaggaacaaaggaaagcatggaag
ttgcaaggtgtaggggagaagtattcgacgtgggagcccacaaagcgagagctggaactg
ctgcggcacaatccaaagcgccggaaaataacaacaaactgcaccatcggtcttcgaggg
ctgatcaacctgggaaacacgtgttttatgaactgcatcgtccaggccctcacccacacc
cccctgctgcgggacttctttctgtccgacagacacaagtgtgagatgcagtccaactcc
tgtctggtgtgtgagatgtcacagctctttcaggagttctactcgggccaccgctcgccc
cacattcccttccggctgctgcacctggtgtggactcacgcgcgccaccttgcaggctac
gagcagcaggatgcccatgagttcctcatcgctgccctggatgtgctgcaccgccactgc
aaaggagatgacaacgggaagaaggctaacaaccccaataactgcaactgcatcatcgac
caaatcttcactggaggcctgcagtctgacgtcacatgtcaagtctgccacggtgtttcc
acgacgattgacccgttctgggacatcagtctggacctgccagggtcgtccacgcccttc
tggcccctcagccccgggggggacggcagcacactgaacggagagagccacctctccggg
gccaccacgctcacagactgtcttcgcaggtttacccgaccagaacacttggggagcagc
gccaagattaaatgtagcggttgccatagttaccaggagtccaccaaacagctgaccatg
aagaagctccccattgtggcgtgtttccacctcaaacggtttgaacactcagcgaagctg
cggaggaagatccctacctatgtctcgttccccttagagctggacatgactcccttcatg
gcctccagtaaagagagcaggatgaacggacagtaccagcagtcagtagacgtgttcaac
aacgacaataagtattctctgtttgcggtggtcaaccaccagggtactttggagagcggt
cactacaccacgttcatccggcagcacaaggaccagtggttcaagtgcgacgacgccgtc
atcaccaaggccagcatcaaggacgtactggacagcgaaggaaaaggtagctgtgtaatt
aagaacggtatcctgcaggattcaatagttggaaatgtaagagttgactggaatccagaa
agaacaaaacatgtacatcaaaaggtacctcttgttctaccataa
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integrated database retrieval system
