Oncorhynchus keta (chum salmon): 118388873
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Entry
118388873 CDS
T09424
Name
(RefSeq) WD repeat-containing protein 82-like isoform X1
KO
K14962
COMPASS component SWD2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118388873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118388873
03036 Chromosome and associated proteins [BR:
oke03036
]
118388873
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
118388873
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
118388873
COMPASS/SET1 complex (yeast)
118388873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
118388873
NCBI-ProteinID:
XP_035634314
EnsemblRapid:
ENSOKEG00005005479
LinkDB
All DBs
Position
10:complement(46583906..46591995)
Genome browser
AA seq
314 aa
AA seq
DB search
MKITDSVLRSFRVARTFRENSQKVNCVDYSSNGESAISSSDDDSIVLYDCQEGKPIRTLY
SKKYGVDLIRYTHGDANTVVYSSNKLDDTIRYLSLTDNKYIRYFPGHTDRVVALSMSPVD
DTFISGSLDMTIRLWDLRSPNCQGLTNPLGKPVCSYDPEGLIFAAGVDSEAIKLYDLRSF
DKGPFASFETLFSRVCEWTGLKFSRDGKQILISTNGGAIRILDAFNGSVLHTFSGYNNSK
GISLEACFTPDSDFVMIGSEDGRVHVWSTESGMKIAVLDGKHSGPINTLQFNPKYMTFAS
ACSNMAFWLPCVGD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaagattacggacagcgtgttgcgaagttttagggttgctaggacattccgggagaat
tcgcagaaagtcaactgtgtggactacagctcgaacggcgagagtgcaatatctagtagc
gacgacgactccattgttttatatgactgtcaggagggaaaaccaatacggaccctgtac
agtaagaagtacggagtagaccttatccggtatacacatggggatgccaacacagtggtc
tacagctccaacaaactagatgataccatccgatacctgtctctcactgacaacaagtac
atccgctacttccctgggcacactgatagggttgttgctctctccatgtcaccggtggat
gacacatttatctctggttccttggatatgaccatacgactctgggacctgcgctctcca
aactgtcagggtcttactaatcctttgggtaagcctgtttgctcatatgaccccgagggc
ctgatattcgctgctggggtcgattctgaggcgattaaactgtacgacctccgctccttt
gacaagggcccattcgcctcctttgagactctgtttagccgtgtctgtgagtggactgga
ctgaagttcagcagggacgggaagcagattctcatctctaccaacgggggtgctattcgg
atcctagatgccttcaatggatccgtgctgcacactttctcaggctacaacaacagtaaa
ggcatttcattggaggcctgcttcaccccagactcagactttgtcatgattggttcagag
gatgggagggtccatgtgtggagtacagagagtgggatgaaaatagctgttctggacggg
aagcattcaggaccaatcaacacactgcagtttaaccctaaatacatgacgtttgccagc
gcctgctccaatatggcgttctggcttccctgtgtaggagactga
DBGET
integrated database retrieval system
