Oncorhynchus keta (chum salmon): 118390246
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Entry
118390246 CDS
T09424
Name
(RefSeq) bromodomain and WD repeat-containing protein 3-like isoform X1
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118390246
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
118390246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Bromodomain
NBCH_WD40
Auxin_resp
Motif
Other DBs
NCBI-GeneID:
118390246
NCBI-ProteinID:
XP_035636500
EnsemblRapid:
ENSOKEG00005001806
LinkDB
All DBs
Position
11:complement(39381238..39409649)
Genome browser
AA seq
1770 aa
AA seq
DB search
MAEEQCSEIEAELYYLIARFLQSGPCKKSAQILVEELEEYELIPKRWSWDGKQYKRNFQD
WVILNQHIPADYLLRVCQQIGPLIDKEAPPSVPGVQTLLGLGRQSLLRTAKSCSHTEWSG
TAVAALHRGRPPEPPVSFGKPPSIVSIMGARQATGTARFGHALPSYTYQHVKMHRRILGH
LSSVYCVAFDRSGRRIFTGSDDCLVKIWSTDDGRLLSTLRGHAAEISDMAVNYDNTLIAS
ASCDKVIRVWCLRTCAPITVLQGHAASITSIQFCPAVKGPMRYLASTGADGMVCFWQWHS
LSMKFVDRPVKFIERSRPGVQISTSSFSCGGMFLATGSTDHVIRVYYLGSETPMKLSELD
SHMDKVVVVQFCNNSYSLRFVSGSRDGTVRIWHYQQQEWKSITLDIATRLPGTAVVNGED
KTKLVPTMVAWDRGDRTVVTAVSNYLLKVWSSTTGQLLHVLSGHDDEVFVLEAHPFDHRI
MLSAGHDGNIYMWDLSKGSKIRNFFNMIEGQGHGAVFDCKFSADGQHFACTDSHGHLLIF
GFGCSRPYEKIPDQMFFHTDFRPLIRDANNFVLDEQTQQAPHLMPPPFLVDVDGNPHPTH
YQRLVPGRESCKDEHLVPQLGYMANGDGEVVEQVIGQQTAEDGHGESPLDVLIRELQNQP
DESRDQDGVPEGEGAVEGADVVGSPPNVGLRRSGQVEGVRQMHHNAPRSQMATERDLLAW
SRRVVVNEVQQGVLRVMEETRRAKGEVECSLYNTERRRKPVLGAPKTEEQPPCKRSLRRT
QRKKKKQTRPAPAYQTRSARDRRPVDRRRNSDSQMDSDSDGEAEEQVEASDASSDGEAQW
QSDSSSSVSSSDYSDWTADAGINLQPPKRTSRRQVRPPGGSSSSEEAEGQGEEARTKQAE
EKKKPKQTKQKKPSSSLSLAGCDAEEWLPPSWIMETIPRRSPFVPQMGDELMYFRQGHQA
YVRAVRRAKAYSINPQKQSWNKLNLRDQESVKVVGIKYEVGPPTLCCLKLAFLHPISGKM
TNESFSLKYHDMPDVIDFLVLQQFYDEAKEHNWQTGMRFRSIIDDAWWFGSVEDQQPLQP
EYPDSLFQCYTVKWDNSEREKMSPWDMEPIPDEAELPEDVGDGVVVTEEEVKARLYSPQE
GEWGAQTRDEDCQRVIFGIDELLTLDLAKAFASPVDLRDYPLYCTVVAYPTDLSTIRRRL
ENRFYRRISALMWEVRYIEHNARTFNEPQSPIVTAAKVVTDVLLRYIGDQSCTDILDLYH
KVKTELSSGEDEVKHEDTAEVDMDSDTPGTSTGQQRANPSPKKRGVVLDVRAWRGQCREL
LRRMMDGPDSEPFRQPVDLFTYQDYRDIIDTPMDLGTVTETLIIGNYENPMEFAKDVRLI
FSNSKAYTPNKKSQIYTMTLSLSAFFERQIISIISDYKSAVQNQRRKSRQSVSYRKRLHS
GGSSPPTSRPSSPKGKHTSRKKPTPKELQTSSKKRPRRPSQETSSVMVDEDSQPSSSSNS
GTGSHSGGPGADRVTRSQTTPVKNSEGNRPLTNGTRQGHRRRVLQEEEGEGSGGSNSSSS
SSSSSSSSSSSSSSDSESDSESEVGKFVDGGDHDYSKAPRLKTVHKVKGKMAVSGKRMLE
EEEAPERAKRARVQAEEQEEEDEDEQGEDEEEEEGEQPQPPQQEEGGETEDEEEEPEDEE
EPEEMEESEEEEESEQGEGGAEGGQKSSSRSKSGQVNTRNQGRRTVLYNDESDDESGTTE
DPLNLGMSRSGRLRRMTEKARVSHLMGWNH
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaacagtgttcagaaatagaagctgaattgtattacctcattgctagattt
ctccagtcgggaccgtgtaaaaaatcggcacagatactggttgaggaactagaagagtat
gagttgatcccgaaacgatggagttgggacggcaaacaatacaaacgaaacttccaagac
tgggtgatcttgaaccagcacatccctgcagactacctgctgagagtatgccagcagata
ggtcctctcatagacaaggaggccccacctagtgtccctggggtccaaaccctcctgggt
ttgggaaggcagtctttgcttcgcacagctaaaagttgtagccacacagaatggagtgga
actgctgttgctgcactccaccggggtcgacccccagaacccccagtcagctttgggaag
ccccccagcatcgtgtccatcatgggtgctcgccaggctactggcactgcccgcttcggc
catgctctgccatcctacacctatcagcatgtgaagatgcacaggcgcatcctgggccac
ctgtcctctgtatactgtgtggctttcgaccgcagtggcagacggatatttacaggttct
gatgactgtctggtaaagatatggtccacagatgatggccggctgctgtccaccctgcgt
ggccatgcggccgagatctccgacatggcggtgaactacgacaacacgctaatcgcctca
gccagctgtgacaaggtcatcagagtgtggtgcctgcgcacctgcgcccccatcactgtg
ctgcagggccatgcagcctccatcacctccatacagttttgtccggcggttaaaggacca
atgcggtacctggcctccaccggagcagacggcatggtgtgtttctggcaatggcactcg
ctcagcatgaagtttgttgaccggccagtcaagttcattgagcggtcaaggcctggggtc
cagatctccacctcctccttcagctgtggtgggatgttcctggccacaggcagcacggat
catgtaatcagggtgtattaccttggctctgaaacacccatgaagctctctgagttggac
tctcacatggacaaagttgtggtggtccagttttgtaacaacagttacagcctgaggttt
gtgagtggtagtcgtgacggcacagtcaggatatggcattaccagcagcaggaatggaag
agcattactctggacatagccactagactgccagggactgctgttgtgaatggcgaggac
aagaccaagctggtgccgacaatggtggcctgggaccgtggtgaccgcacggttgtcaca
gcggtctctaactacctgctcaaagtgtggagctccaccacgggccagcttctgcatgtg
ctatctggtcatgatgatgaggtgtttgtcctggaggcccacccctttgaccaccgcatc
atgctctctgctggccacgacggcaacatctacatgtgggacctgtccaagggatccaag
atccgcaacttcttcaacatgattgagggccaaggtcacggagctgtatttgactgtaag
ttctcagctgatggacaacattttgcctgcactgactcccatggccacctgctcatcttt
ggctttggctgcagcagaccctatgagaagattcctgaccaaatgttcttccacactgac
ttcaggccgctaatccgagacgccaataactttgtcctggacgagcagacccagcaggcg
ccccaccttatgccccctcccttccttgtggatgtggacggtaacccccaccccacccac
taccagcgcctggtgcccggcagggagagctgcaaggatgagcatctggtgccccagctt
ggctacatggcgaatggtgatggtgaggtggttgagcaggtgatcggccagcaaacagca
gaggatggtcacggagaaagccctttggatgtcctgatcagagagttgcagaaccaacca
gatgagagtcgggaccaagatggagtgcctgaaggagagggtgctgttgagggagcagat
gtagtgggatcgccccctaacgtgggcctgaggaggagtggtcaggtggagggggtgcgt
caaatgcaccacaacgcccctcgcagtcagatggccacggagagggacctgctggcctgg
agcaggagggtggttgtcaacgaagtccagcaaggggtcctccgggtgatggaggagacc
aggcgggccaaaggtgaggtggagtgttccctctacaacacagagaggaggaggaaacct
gtactcggtgctcctaagactgaggagcagcctccatgcaagcgctccctgcggcgaacc
cagaggaagaagaagaagcagaccagacctgcaccagcgtaccagacccgctcagcacga
gatcgccgccctgtggataggcggaggaactctgacagccagatggactcagacagcgat
ggagaggcagaggagcaggtagaggccagcgatgcttcctctgatggggaagcacagtgg
cagagtgacagcagttccagtgtctcctccagtgactactctgattggacagctgatgcg
gggatcaacctccagccccccaagcgtaccagcagaaggcaggtgcggccgcccggtggc
tccagcagctcggaggaggcggagggccagggagaggaggccaggacgaagcaggcggag
gagaagaagaagcccaagcagaccaaacagaagaaacccagttcgtctctgtctctggct
ggctgtgacgcggaggaatggcttcccccgtcctggatcatggagaccatcccccgacgc
tcgccttttgtgccacagatgggtgatgagctgatgtacttcaggcagggccaccaggcc
tatgtcagggcggtgcgcagggccaaggcctacagcatcaaccctcagaaacagtcctgg
aacaagctcaacctcagggaccaggagtctgtgaaggtagttggtatcaagtatgaagtg
gggccccccaccctctgttgtctaaaactggccttcctgcaccccatctcaggcaaaatg
accaatgagtcgttctccctaaagtaccatgacatgccggatgtcatcgatttcctggtg
cttcagcagttctatgacgaagctaaagagcacaactggcagacaggtatgcgcttccgg
agcatcatcgatgacgcctggtggtttggctcagtggaagaccaacagccactccagcca
gagtacccagacagcctgtttcagtgctacactgtcaagtgggataatagcgagagggag
aagatgagcccttgggacatggagcccattcctgatgaagcggagttgccagaggatgtt
ggtgatggggtggtggtgacggaggaggaggtgaaggctcgcctctacagcccccaggag
ggggagtggggggctcaaacacgggacgaggactgccagagggtcatctttggcatcgac
gagctgctcacactggacctggccaaggcatttgcgtcaccagtggacctgcgggactac
cctctctactgcactgtggtggcctaccccactgacctcagcaccatccgcagacggctg
gagaaccgcttctacaggaggatctctgctctgatgtgggaggtgcgctacatcgagcac
aacgcccgcactttcaacgagccccagagccccatcgtgacagcagccaaggtggtgact
gatgtgctcctccgctacatcggggaccagagctgcacagacatcttagatctgtaccac
aaggtgaagacggagctgagcagtggagaggatgaggtgaaacatgaagatactgctgag
gtggacatggactctgacactccagggacctccacaggacaacagcgggccaatcccagt
cctaagaagcgtggggtggtgttagatgtgcgtgcttggcggggccagtgtcgggaactg
ctgcggcgtatgatggacggccctgactctgagcccttcagacagcctgtggacctcttc
acctaccaagactatcgagacatcatagacactcccatggacctggggactgtaacagag
actctgatcatcgggaactacgagaaccccatggagtttgccaaagatgtccgcctaatt
ttcagcaactccaaggcctacacgcccaacaagaagtcacagatctacaccatgaccctg
agcctgtcagccttctttgaaagacaaatcatctccatcatctcggattacaagtctgcg
gtccagaaccagcggaggaagagtcgccagagtgtcagctacaggaagagactgcacagc
gggggcagctccccacccaccagccgaccctccagtcctaaagggaagcacacgtcaagg
aagaaaccaacaccaaaagaattacagacctcatccaagaagcggcctcgcaggccatct
caagagacgagcagtgtgatggtggatgaggacagccaaccctcatcatcgtctaactcc
gggacaggaagccatagtgggggtccaggggccgaccgtgtcacccgcagccaaaccact
cctgtcaagaactcagagggtaacagacctctcactaacggcaccagacagggccacagg
agacgagtgctgcaggaggaagagggagagggatctggaggatccaatagctcatcttcg
tcatcgtcttcctcgtcttcctcatcatcctcctcctcatcagacagtgagtcggacagt
gagtcggaggttggaaagtttgtggacgggggagatcacgactacagcaaagctccccgc
ttaaaaacggtccacaaagtcaagggcaagatggccgtctctgggaagaggatgctggaa
gaagaggaggctccagaaagagccaagagagcacgagtccaggcagaggagcaggaagag
gaggatgaagacgaacaaggcgaagatgaggaggaggaagagggggagcagccacagcca
ccgcagcaagaggaagggggggagactgaggacgaagaggaggagcctgaggacgaagag
gagcctgaggaaatggaggaatcagaagaggaggaggaatcagagcagggtgagggtggg
gcagagggcggtcagaaaagcagcagccgcagtaagtctggtcaggtgaacactcggaac
cagggccgcaggacagtgttgtacaacgacgagtcagatgacgagtcagggaccacagag
gacccactcaacctaggcatgtcccgctcaggacggctacgccgcatgaccgaaaaggcc
cgggtcagccaccttatgggctggaaccactga
DBGET
integrated database retrieval system
