Oncorhynchus keta (chum salmon): 118391770
Help
Entry
118391770 CDS
T09424
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 28-like isoform X1
KO
K21122
ubiquitin carboxyl-terminal hydrolase 28 [EC:
3.4.19.12
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oke01002
]
118391770
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118391770
Enzymes [BR:
oke01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118391770
Peptidases and inhibitors [BR:
oke01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118391770
Ubiquitin system [BR:
oke04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118391770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Motif
Other DBs
NCBI-GeneID:
118391770
NCBI-ProteinID:
XP_052313734
EnsemblRapid:
ENSOKEG00005001300
LinkDB
All DBs
Position
12:18511551..18538064
Genome browser
AA seq
1183 aa
AA seq
DB search
MGKTTNSVSQGDISHAVGLLTTQPPEEGQGTEETADTEANRETQKRAPPKDDLQTAIELT
LQESQAEEMELNRALEDRAARVKRKCCEAQGESCSPADWIRQDGWPVGIHNMGNTCWFSA
VIQSLFHLPVFRRLVLNYCLSERILEKCKSHSDKRNIAFMQELRCLFALMVGSTRRFVDP
SAAVELLREAFRSSEAQQDVSEFTHKLLDWLEDAFQLAANGKSLEDKKENPMVQLFYGTF
VAERKHEGKTLSNIEQFGQYPLQVNGFNNLEECLEGAMVEGEIEALHPDQTISSGSKRWF
SKLPPVLTFELSRFEFNQSLGRPEKIHKKLEFQEIIYMDRYLHKNNEQTHNRRGEVKRLK
EHLTVLQQKLECYRSYGSGPTNYPLAEMLQYMLEFACTKPTSVSPAEDPRLAASSPTPPS
SNPQHTDANPDDTSQCHEPGDAGPSDSSTCQQKHSSSQRMPIYKPFTQCRPPMDAPPHPA
PHSVTEEELRFVKTCLQRWRTEMENNMDELKASIDRVSQALEGMYSDNRLCQVPYRLHAV
LVHEGQALAGHYWAYIYDHSNQCWMKYNDVIVSESSWEELVRDSYGGMTNASAYCLMYID
DRLPHLIAEDTDDETGQVMQGMDSLPPILGRYVREDNHWFQQELREWEEQLYQPPQQEPA
APTAASTSTRVPSKKKDEAAEPVPQPGPAQEPTGEQGQEPEAELAVKPAVESEKPVPTSQ
SQSPVPVSPIPVSLENAGSSPEESDHQTVMPEPCQHTSEDKEGQQHSQVGRQLPPPKSPS
PAAEMNGQAQTAAVTHDPSTEFTTETDSETGVREAGAEAAAAPDTQADSEDGQDALPAPC
RRQQQPENEVLEVEIPNVGRILVQADNDGYNEEMMLTPAMQGIIMAIAKARQAFDNEGPE
AGLIKAFQEEYSRLFELSQEETTTQQDPRLHHALVYFFQNKAPNRVIERTLLEGFTDRNL
SFDDRSISIMREARAKLRLIKPEDMDMEEYMQWHDDYSLFRTVFVYLLTGLEQYQHGKVS
EALNYLNHAYKDNTMLLRRGEKRGVDQSLIALYRRRCLKELNDNAATLFRSSEVSGVEEG
VIIMNETVIPCMHLMSRPDMISQEDLDTMEAVRSHWCSYLEVDLDDSLQLKLGEFLPRVL
DCSTERVVLKDPPTVRSKVPHDLCSRLAAIMESITNTSLVAVK
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaacaacgaattcggtcagccagggggacatcagccatgctgttggactgcta
accacacagcctccagaggagggccaggggactgaggagaccgcagacacagaagccaac
agggagacccagaaaagggctccacctaaagatgaccttcagacagccatcgagctcacc
ttgcaagaatcccaggcagaggagatggagctcaacagggcactggaggacagggctgca
cgagtgaagaggaagtgctgcgaggcccagggagagagctgcagccctgcagactggatc
cgccaggatgggtggcctgtgggcatccacaacatgggcaacacctgctggttcagtgcc
gtcatacagtccctgttccacctgcccgtgttccgcagattggtactcaactactgcctg
tctgagcgaatcctggagaagtgtaagagccactcggacaagaggaacatagccttcatg
caggagctgcgctgtctctttgctctcatggtgggctccactcgcaggtttgtggacccg
tctgctgccgtcgagcttttgagagaggctttcagatccagtgaggcccaacaggatgtg
agtgagttcacccacaaactccttgactggcttgaagatgcctttcagctggctgccaat
ggaaaaagcctggaagataaaaaagaaaatccaatggttcagcttttctatgggacgttt
gtggcagagagaaaacatgagggcaagaccttatccaacatcgagcagtttggccagtac
cccttacaagtgaacggtttcaacaacttggaggaatgtctggaaggtgccatggtagag
ggggagattgaagccctccatccggatcaaaccatttcatctggcagcaagagatggttc
tcaaagttaccaccagtgttgacctttgaactgtccaggtttgagttcaaccagtcttta
ggacgcccagagaaaattcacaagaaactggagttccaagaaatcatttatatggacaga
taccttcacaagaacaatgagcagactcacaacaggagaggagaggtgaagcgactgaag
gagcatcttacggtcctgcagcagaaactggaatgctacagaagctatggctccgggccg
acaaattatcccctggcagaaatgttacagtacatgttggagttcgcctgcactaagccc
accagtgtgtcccctgctgaagacccgaggctggctgcctcttcccccactccccccagc
agcaacccccagcacacagacgccaaccctgacgataccagtcagtgtcatgagccagga
gacgcaggcccgtccgacagctccacctgtcagcagaagcactcctcgagccagaggatg
cccatctacaagcccttcacccagtgcagaccccccatggacgccccacctcatcccgcc
ccccacagtgtgactgaggaggagctgcgcttcgtcaagacctgcctgcagcgctggagg
acagagatggagaacaacatggacgagctaaaggccagcatcgacagggtcagccaagcg
ctggagggcatgtactcggataaccgtctgtgtcaggttccgtacaggcttcacgctgtc
ctcgtccacgagggccaagccttggccggccactactgggcctatatctacgaccacagc
aaccagtgctggatgaagtacaacgacgtcatcgtcagcgagtcgtcctgggaggagctg
gtcagggactcgtacggaggcatgaccaacgccagcgcctattgtctcatgtatatcgac
gacaggctgcctcacctaattgcagaagacacagatgacgagacgggccaggtcatgcag
ggcatggactctttgccacccatcctcgggcgctacgtgcgcgaggacaaccactggttc
cagcaagagctcagggagtgggaagagcagttataccagccgccacagcaggagccggcc
gctcctacagcagcctccacctccactcgtgttcccagtaaaaaaaaagacgaggcagca
gaaccagtcccccaacctggacctgcccaggaacccactggagagcagggacaggaacca
gaggcagaattggctgttaaaccggcagtggaatctgaaaagcctgtcccaacaagccag
tcccagtccccagtacctgtgtccccaatacctgtgtccctggagaacgctggcagcagc
ccagaggagagcgaccaccagactgtcatgccagagccctgccaacataccagcgaggac
aaggaggggcagcaacacagtcaagtgggcaggcagctccccccaccaaagtctcccagc
cctgcagcagagatgaatggccaggcccagactgcagctgtgacccatgacccctccaca
gagttcaccactgagaccgacagcgagactggagtcagagaggcaggggcggaagctgcg
gcagcgcccgacacccaggcagacagcgaggatggtcaggacgccctgccggcgccttgt
cgccggcagcagcaaccagagaacgaggtgttggaggtggagatccccaacgtgggcagg
atcctggtgcaggctgacaatgacggctacaatgaagagatgatgctcactccagctatg
cagggaatcattatggccatagccaaagccagacaggcattcgacaatgaaggccctgag
gctggcctcatcaaggcgttccaggaggagtactcccgtctgtttgagttgtcccaggag
gagaccactacccagcaggacccacgcctgcaccacgccctggtctacttcttccagaac
aaggcacccaatcgcgtcatcgagaggactctgctggagggcttcaccgaccgcaacctc
agctttgacgacaggtccatcagtatcatgagagaggcccgcgccaaactacgcctcatc
aagccagaggatatggatatggaggaatatatgcaatggcatgacgactacagcctgttc
cggacagtgtttgtctacctgctgacgggcttggaacagtaccagcatggaaaggtgagc
gaggcgctgaattacctcaaccacgcctacaaagacaacaccatgctactgagaagaggg
gagaagagaggggtggaccagtcacttattgcactttacaggaggagatgtctcaaagaa
ttgaatgacaatgcggccaccctgttcaggagcagcgaggtgagcggcgtggaggaaggt
gtgatcatcatgaacgagacggttatcccctgcatgcacctgatgagccggccggacatg
atcagccaggaggacctggacacaatggaggctgtccgcagccactggtgctcctacctg
gaagttgacctggatgactccctacagttaaagctgggtgagtttctgcccagggttctg
gactgctcaacagagagggtggtcttaaaagatccaccaacagtgcgctccaaagtgccc
cacgacttgtgcagccgcctggccgccatcatggagtctatcaccaacacctccttggtt
gctgtcaaataa
DBGET
integrated database retrieval system
