Oncorhynchus keta (chum salmon): 118391980 Help Entry 118391980         CDS       T09424                                  Name (RefSeq) synaptopodin-2-like isoform X1   KO K24066   synaptopodin-2 Organism oke  Oncorhynchus keta (chum salmon) Pathway oke04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:oke00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     118391980  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:oke04990]     118391980 Domain-containing proteins not elsewhere classified [BR:oke04990]  PDZ domain-containing proteins   Other PDZ domain-containing proteins    118391980 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PDZ PDZ_6 Calsarcin PDZ_2 Motif Other DBs NCBI-GeneID:  118391980 NCBI-ProteinID:  XP_035639403 EnsemblRapid:  ENSOKEG00005001318 LinkDB All DBs Position 13:18086898..18128177 Genome browser AA seq 1515 aa AA seqDB search MGTGDYICVTVHGGAPWGFSLREGEGDDYRRLQVYQVEEGGHASLAGICEGDEVVSLNGE PCGELSLPKANALIDASVDCLQLLVKRWHTISPEDFHSETYFGTRESSGEALESTTLHIL SPGRSQPPRELYIADSQDEAYYGETESDMEAPGGIHLVRTQLCVPAPEECQFPRGGGDKG REGPQGGSFSPGAMVELQLSLAEHTLEDPVCTSLGSALGIEGEIQAREALKNEALLHTTT HSLYVPGPAREPLSQHGVVLSSPPLLGQVEVTLQRGSPRLVEGVVVYGASGSVGEAPGEE GGGKSQGASFTVSFGIPTEGAEPAAERDSDSEKDLEKPNKHRAKHARLRRSESLSDKQVK EAKSKCKRIAILLNAEAPNPNNKGVLMFKRHRQRAKKYTLVSYGTGESEPEYEVDDSDEE DARAIKFTLVATTSGSELEEDFITNAQGGGRVLTFDWDTGLLEIERKLNSGEEMEQLPNT TGKGATMFAHRRQRMDEIVGEHEEMRRQGIPVEGVQEVEKHAANQQMEERSYMQATTERQ AYMDFSMHQKQQQQYQKYQEQQYYEQQQQQQQQQYEQQQYQQQQQQYEQQQYQQQQQYHQ QQQEYQQQHIQQYSSNMNGMANHQTNEMQSSMSNQTAQPFSLQNQMPALFSAPVSGSNQE MMGQGEQIASRDERISTPAIKSGILQDTRNRFKGKPMFNFKQAPKVSPNPELLNLLNRSD KKLDSESCTEEDYLSLGAEACNFLQSPRVKHKTPPPVAPKPIINPNSPPWSPQPELANQE LPLHAENSVPAPAAALETESAPEPAPEPSPPFAPQEAPVPAKPPSPAKHTWSPPGSQAQQ QQPQQAPAWGGNGPSPTQPHSQPEPQVSSWAPSLTQASQQPLVSTWPPAEMKHQAPAPSK SPPQLPWVTPQPPPPQPQPPINSWAIAPAQSQLQWVQPQEQQQPQAPWAQPQEQAQQHPQ APWAKQPQSPEQAWPQDQPQPPWVSSSQPPMNAWTPPQSHTQPQQPPWAQQAQPQHPAQP QPHMNAWAPAPAQAQVQPPWAQLSPEQEQPPMNAWAPDQNQARPQPPWVQPPSTQSSPQQ NWQQPPPQQAPLQPPMNAWAPAQAQPQTHTSTWAPQPQQAPVNTQTWMHRVCQPSPKPWN APQSAPCSTPPPPPQRINSYTLDERSSSPVINPMASVLAPVGGMGSALSMPAVRGKGADL FAKRQSRMEKYVVDSDTVLAATAQAAQQAQAATVQANKARPTSPSPSVPHPWKYSPNCRA PPTSNYNPIQSPSYPPGAIKQPPPSSPVVKAKKGKGKPACKPLAVIDVMKHQPYQLNASL FTYGPAVEAAEAAKAAAPKPAPVPPNQNQPIRYEHAAPVQPAGQMNAPYSQQPQQLYGIT PQPPMHDSPYHPASPNAYQPSNNPYQQVPAGPYQHPYNPPYKQAPPDPYQSQQQAQNPSY QHTPQGPYQPSHSPPYQAAPQAPYQPLPPSTYVVPSFPIAAKSESVSGGSTAPKPRFMAK KSSAQVWKPAAVGKE NT seq 4548 nt NT seq  +upstreamnt  +downstreamnt atgggcactggggattatatctgtgttacggtgcacggaggcgcgccctggggcttcagt ctccgcgagggagagggggatgactaccggcgtttgcaggtttatcaggtggaagagggc ggtcatgcgtccctggccgggatctgcgagggggacgaggtggtgtcgctgaatggagaa ccctgcggggagctttccctcccaaaagcaaatgctctcattgacgcctccgtcgactgc ctgcaactactggtcaaaagatggcacaccatatcccctgaggattttcattcagagacc tactttggcacaagggagtcctctggtgaggctttggaaagcaccaccctccacatcctg tcccctggcaggtcccaaccccccagggagctctacatcgctgattcccaggacgaggcc tactatggggagacagagagtgacatggaggcccccggagggatccatctggtccgcacc cagctctgcgtacctgcgcctgaggagtgccagttccccagaggaggaggggacaaaggt cgagagggaccccagggggggagcttctcccctggggcaatggtggagctacagttgtcc ctcgccgaacacaccctggaggatcccgtctgcacctccctggggagtgctcttggaata gagggggagattcaggcgagagaggccctcaagaacgaggccctccttcacaccaccacc cactcgctctacgtccctggcccagctcgggagcccctgagtcagcatggagtggtgctg agctccccccctctgctcggccaggtggaggtcaccctgcagaggggctctcctcgcctg gtagaaggggtagtcgtctatggggccagtggaagtgttggtgaagcccctggggaggaa ggaggagggaaaagccagggagcctccttcaccgtctcctttggaattcccacagagggg gccgaaccagcagcggagcgagactcagattcagagaaggaccttgagaaacctaacaag caccgggccaagcacgccaggctcaggcgcagtgagagcctgtcagacaagcaggtgaag gaggccaagtctaaatgtaagcgcattgctatccttctgaacgctgaagctcccaacccc aacaacaagggggtgttgatgttcaagaggcatcgacagagggccaagaagtacacactc gtcagctacggcaccggtgagagtgaaccagagtacgaggtcgacgacagcgacgaggaa gacgccagagcgatcaaattcaccctcgtagccaccaccagcggatcagagcttgaggag gactttatcacgaatgcccagggcggtggcagagtgctaaccttcgactgggacacagga ctactcgagatcgagcgcaagctcaactccggagaggagatggagcaactgcccaacacc acgggaaagggggccacaatgttcgcccatcgccgccagcgcatggatgagatcgttggc gaacatgaggagatgagacgccaggggattcccgtggagggggtacaggaggtggagaaa catgcagccaaccagcagatggaggagcgctcgtacatgcaggccaccacagagaggcag gcctacatggactttagcatgcaccagaagcagcagcaacagtatcagaagtaccaagag cagcagtactatgaacagcagcagcagcagcaacaacaacagtacgagcagcagcaatac cagcagcaacaacaacagtacgaacagcagcagtaccagcagcaacaacaatatcatcaa cagcagcaagagtaccaacagcagcatattcagcagtactcctctaacatgaatggcatg gccaaccatcaaaccaatgaaatgcagagttccatgagcaatcaaactgcccaacccttc tcattacaaaaccagatgcccgccctgttttctgccccagtgagtgggagcaaccaagag atgatgggtcagggagagcagattgcctcacgcgacgagcgcatttcgacgccagcaatc aagtctgggatcttgcaggacacaaggaacaggttcaagggcaagccaatgttcaatttc aaacaagcacccaaagtgtcacccaaccccgagcttctgaatctcctcaacaggagtgac aagaagttggattccgagtcatgcacggaagaggactatcttagcttgggtgctgaggct tgcaacttcctccagtcaccaagggtcaagcataaaacgcctccaccagtggctcccaag cccatcattaacccaaactctccaccctggtcccctcagcctgagctggccaaccaggag ttgccactgcatgctgaaaatagcgtccctgcacctgctgcagcccttgagaccgagtcc gccccagaaccggccccagagccctcccctccttttgccccccaggaagctcctgttcct gccaagcccccctctccagccaaacacacatggagtcccccagggtcccaggcacagcag cagcagccccagcaagcgccagcctggggaggaaatggtccctcaccaactcagcctcat tcgcaacccgagcctcaagtgagttcctgggctccgtcactaacacaggcatcacagcag ccacttgtgagtacttggccacctgctgaaatgaagcaccaggctccagctccaagtaag tccccaccacagctcccttgggtgactccccaaccaccccctcctcagcctcagccaccc attaattcttgggctatagcgcctgcccagtcacaactccaatgggttcaacctcaagaa cagcaacagccccaggcaccttgggctcaacctcaagaacaagcacagcaacatccccag gcaccttgggctaaacagcctcagtctccagaacaggcttggccccaggaccagcctcag ccaccttgggtgtcatcatctcagcctccaatgaatgcatggacaccaccacagagccat acccagccacaacaaccaccttgggcccaacaagctcaaccccaacatccagctcagcct caaccccatatgaatgcatgggccccagcacctgctcaggctcaggtccagcctccatgg gcccagctatctccagagcaagaacagccacccatgaatgcctgggccccagatcagaat caggcccggccacagccaccttgggtccaaccaccttcaacccaatcctcaccccagcaa aactggcaacaaccacctccacagcaggcacccttacagccacctatgaatgcatgggcc ccagctcaggcacagcctcagacacacacaagtacctgggccccacaaccacagcaagcc ccagtgaatactcagacctggatgcacagagtgtgtcaaccttctccaaaaccttggaat gctccacaaagtgctccctgttctactcctccacctcccccacagcgaattaactcttac acacttgacgaaaggtcctcgtcacccgtcatcaatccaatggccagtgttttggcacca gtaggaggaatgggctcggctttgtcgatgccagcggttcgggggaaaggagccgatttg ttcgccaagaggcagtctcgtatggagaagtatgtcgtggattcggacactgtgctggca gccactgcacaggcagcacagcaagcccaggcagccactgtgcaggcaaacaaggcaagg cccacgtcgccctctccctccgtacctcatccgtggaaatattcacccaattgcagagct ccccctacatcgaattacaaccccatacagtccccttcctacccaccaggggccattaag caaccccctccatctagccctgtggtcaaagcaaagaaagggaaaggcaaacctgcctgc aaaccccttgccgttatagatgtcatgaaacatcagccttatcagctcaatgcctccctc tttacttatggcccagcagtggaggctgccgaggctgccaaggccgccgcaccaaagcct gccccagtccctccaaaccaaaaccaaccaataagatatgagcacgctgcccctgtccag ccggctggacaaatgaatgctccctattcacagcagccccagcagctctacgggattacc cctcaaccacccatgcatgatagtccataccacccagcctcacctaatgcttaccagcca tctaacaatccctaccagcaggttcctgctggcccttaccaacatccatataatccccct tacaaacaagcccctccagacccttatcaatcccagcagcaagctcaaaacccttcttac caacacaccccccaaggtccttatcagccatcccatagccccccctaccaagcagcaccc caagccccataccagccactacctcccagtacctacgtggtgcccagctttcccatagcg gcaaagtctgagtcagtctctgggggcagcaccgctccaaagcccaggttcatggccaaa aagagttcagcccaggtgtggaagccagcagctgtggggaaagagtaa

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