Oncorhynchus keta (chum salmon): 118401225
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Entry
118401225 CDS
T09424
Name
(RefSeq) nuclear receptor ROR-alpha A-like isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118401225
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oke03310
]
118401225
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118401225
Nuclear receptors [BR:
oke03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
118401225
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
118401225
NCBI-ProteinID:
XP_035654456
EnsemblRapid:
ENSOKEG00005018149
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All DBs
Position
22:24905484..25174232
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AA seq
526 aa
AA seq
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MESPPDPASDPGNSASEPATPARETPVNLETLRKADHPAPVRRQTCSSTNRGGLTNKQGI
SVTKKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLI
DRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQAQRDHQQQPG
EAEPLTPTYGLSANGLTELHDDLSGYMDSHTPDGSKPDSAVSSFYLDIQPSPDQSGLDIN
GIKPEPICDFAPGSGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQ
MTWQAFLQEEMESYQIKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLK
AGSLEVVFVRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHLSE
DEIALFSAFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTL
RALCSRHTEKLTAFKAIYPDIVRSHFPPLYKELFGSDFEQSMPIDG
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccctccagatccagcaagcgacccgggcaacagcgcctccgagccggctacc
ccggccagggaaaccccggtaaacctggagacgctccgaaaagcggaccatccagcccct
gttcgaaggcagacgtgttcaagcaccaacagaggtggactcacgaacaagcaaggtatt
tcagtaacaaagaagacacatacctctcaaatcgaaataattccctgcaagatctgtgga
gacaaatcatcaggcatccattacggtgtgataacatgcgaaggctgtaagggcttcttc
aggaggagtcaacagagcaatgcggcctactcatgcccccgtcagaagaactgcctgatc
gaccgcaccagccgcaaccgctgccagcactgccggctgcagaagtgtctggcagtgggc
atgtcacgggacgcggtgaagtttgggcgcatgtcgaagaagcagcgggacagcctgtat
gcggaggtgcagaaacaccggctgcagcaggcgcagcgtgaccaccagcagcagcccggc
gaggctgagccactcacacccacctacggcctctcggccaatggcctcacagagctccac
gatgacctcagtggctatatggacagccacacccctgacggcagcaagcccgactcagca
gtcagcagcttctacctggacatccagccctcccctgaccagtccggcctggacatcaat
ggcatcaagcctgagcccatctgcgattttgcccccggctcaggcttcttcccctactgc
tcctttaccaacggagagacatcccccaccgtgtccatggctgagctagagcacctggcc
cagaacatctccaagtcccacatggagacgtgtcagtacctgagagaggagctgcagcag
atgacctggcaggccttcctgcaggaggagatggagagctaccagatcaagccccgggag
gtcatgtggcagctgtgtgctatcaaaatcacagaggccatccagtacgtggtggagttt
gccaagcgcatcgacggcttcatggagctgtgtcagaacgatcagatagtgcttctgaaa
gcaggctctttggaggttgtgtttgtcagaatgtgccgtgccttcgactctcaaaacaac
acagtctatttcgatggaaagtatgctgggcccgatgtgtttaagtcattaggctgtgac
gatttgatcagctccgtcttcgagtttgggaagaacttgtgttctatgcacctgtctgag
gatgagatcgccctgttctctgcgttcgtgttgatgtctgcagaccggtcctggctccag
gagaaggtaaaggtggagaaactccagcagaagatccagctggcactgcagcatgtcctg
cagaagaaccacagagaggatggcatactcaccaagttgatatgcaaagtgtcaacactg
cgagcgctgtgcagcaggcatacagagaagctgacggctttcaaagcaatatacccagac
attgtgcgttcccactttcccccgttatacaaggagctcttcggatcggactttgagcag
tccatgcccattgacgggtag
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