Oncorhynchus keta (chum salmon): 118402440
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Entry
118402440 CDS
T09424
Symbol
wdr33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118402440 (wdr33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118402440 (wdr33)
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
118402440 (wdr33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
118402440
NCBI-ProteinID:
XP_035656530
EnsemblRapid:
ENSOKEG00005044185
LinkDB
All DBs
Position
23:complement(44680128..44726089)
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AA seq
1104 aa
AA seq
DB search
MATDTSSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIRHLENRLWQRDHRDFRAIQPDAGCYNDLVPPVGILSNPMNAVTTKFVRTSTNKVKC
PVFVIRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKWNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWN
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDMEPNSLAAIPGMGIPDQLKAAMEQEASDKETAAEEEMSIPGLDWGIEE
ILQKDQKKVPQKKVPYAKPIPAQFQQAWADNKVPLVPPGGEKKERMDEKKMDGKTNTNPM
MLEQMKMDRMNQMDGNMPPPGGPQGPMPPFPGQGGTMPPPPQGFPQSMPPQQMPHNMGPP
MGPGVMQAPFMRPGQMGPPPGSQHHQGPPQGMMGPPDLHGPQGMQRHPGPHRNMGPQGPH
GMPPGPRGMQGPPGNMQGPPPGGMMGPPPRGQGPPPQGGMMPPQGNMMGPQGPMQGGVGM
GPPMQNPTRTHGNMGGMGGMHGMGNMQGPPPGNMQGPPPGNMQGPPGNMQGPPGNMQGPP
GNMQGPPSYMQHQVGQNTGPMMHGMGQQGPNGKGDTRGPPTTTWVLHLGVRGRAVLGALT
RALVLTGETLSRGADPTTSMKVARTSTDGERRAGGEGPARNTREATEEGGKGEGGGMGET
GALLRKDSPVMGESSEAAGTTGLVVMGVQERSLTRGRETDCLHQGMARTQTTRTEGVDRV
ALGGGGSLMSLVGRKRTLTPQMRWPEVGTTEGGGDPHEEGAHPEEEEVVVVVDARACSPP
LMSSPHTMREAEVRRPGRAGKIKVTRHTEKASAPSTARCTTARPLPAVSAPPPCRAWTWP
RCPHANGRGTTARAPETKTPREQG
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggacaccagctccccgccacggttcttccacatgccgcggttccagcaccag
gcaccacggcagctcttctacaagcgccccgacttcgcccagcagcaggccatgcagcag
ctcaccttcgacggcaagcgcatgcgtaaggctgtcaaccgcaagaccatcgactacaac
ccctctgtcattagacacctggagaatcgtttgtggcagcgagaccacagagatttccgt
gccatccaaccagatgcaggatgctacaatgatctggttcctcctgtgggcatcttgagt
aaccccatgaatgcagttaccacaaagtttgtccgaacttccacgaacaaagtgaagtgc
cctgtctttgtcataaggtggactcctgaggggaggcgtcttgtcacaggagcctccagt
ggggagttcaccttgtggaacggactcaccttcaactttgagaccatcttacaggcccat
gacagccctgtgcgggccatgacctggtctcacaacgacatgtggatgctgacggctgac
cacggcggctacgtcaagtactggcagtccaacatgaacaacgtcaagatgttccaggct
cacaaggaggcgattagagaggccagtttctcacctacggataataaatttgccacttgc
tctgatgacggaaccgtacgcatctgggactttctacgctgtcacgaggagagaattctc
agaggtcatggagctgacgtgaagtgtgtggactggcatcccactaaaggcctggtggtt
tcagggagcaaagatagccagcagccaataaaattctgggatcccaagaccggacagagt
ttggccacacttcacgctcataagaacacggtgatggaggtgaaatggaacctgaacggt
aactggctgctgacagcgtcccgcgaccacctgtgtaagctctttgacatccgcaacctc
aaggaggagctgcaggtgttccggggccacaagaaagaggccacagctgtagcgtggcac
cctgtacacgaaggcctgttcgccagcggaggctcggatggatccctcctcttctggaac
gtaggtgtggagaaggaggtgggcggaatggagatggcccatgagggcatgatctggagc
ctggcgtggcacccgctcgggcacatcctctgctcgggatccaacgaccacaccagtaaa
ttctggacgaggaatcggccaggggacaagatgagggacagatacaatctgaatttgtta
cctgggatgtcagaggatggagtggaatacgatgacatggagccaaacagcttagctgcc
attcctggcatggggatccccgatcagctcaaagctgccatggaacaagaggcaagcgat
aaagagactgcagccgaggaggagatgagcatcccaggtctggattgggggattgaggag
attttacagaaagaccagaagaaagtgccacagaagaaggtcccctacgccaaacccatc
cctgcccaattccaacaggcctgggcggacaacaaggtgcctctcgtgccaccgggagga
gagaagaaggaaaggatggatgagaagaaaatggatgggaagacaaacaccaacccgatg
atgctagagcaaatgaagatggaccgtatgaatcagatggacgggaacatgcctccccca
ggaggtccacaaggacccatgccacctttccctggccagggaggaaccatgcccccacct
cctcagggcttcccccagtccatgccccctcagcagatgccccacaacatggggcccccc
atgggccctggcgtcatgcaggctccgttcatgcgaccgggccagatgggcccccctcca
gggtcccagcaccaccaggggcctcctcagggcatgatgggtccccctgacctccatggg
ccccaaggcatgcagaggcaccccggcccccacagaaacatgggcccccaggggcctcac
ggcatgcctcccggacccagagggatgcagggcccccccggaaacatgcagggcccccca
ccgggaggaatgatggggccccctcctcgaggccaggggcctccaccacaggggggcatg
atgccccctcaggggaatatgatgggcccacagggacccatgcagggcggggtgggaatg
gggcctcccatgcagaaccctaccaggacacacggcaacatggggggcatggggggcatg
catgggatgggcaacatgcaggggcccccaccaggtaacatgcaaggacccccaccaggt
aacatgcaaggaccccccgggaacatgcaaggacccccaggcaatatgcagggcccacca
ggcaacatgcaggggcctccatcctacatgcagcaccaggtgggacaaaacactggcccc
atgatgcatgggatgggacagcaaggacccaatggcaaaggagatacccgagggccccca
accaccacatgggtcctccacctgggggtcaggggcagggcggtcctgggggccctgacc
agggctctggttcttactggggagactctcagcaggggcgccgatccaacgacttcaatg
aaggtggccaggacttccacggacggggagaggagagctggaggagagggtccagccagg
aataccagggaggccacagaggaggggggcaagggggagggggggggaatgggggaaact
ggggctcttctgaggaaagattcccccgtgatgggggagagttccgaggccgcagggacg
acaggtttggtggttatgggagtccaggagaggagtttgaccagaggcagagagacagac
tgcctccaccaaggcatggccaggactcagacgacacgtacagagggggtggacagggtc
gccctggggggagggggttccctgatgagtttggtgggcaggaagagaactttgacacct
caaatgagatggccggaggttgggacaacggagggagggggagacccccacgaggagggg
gcccacccagaggaggaggaggtggtggtggtggtggacgccagggcttgctccccaccc
ctgatgagttccccccacactatgagggaggcagaagtcaggaggcctgggagggcgggc
aagatcaaggtcacgaggcatacagagaaggccagcgctccgagcacggcccgctgcacg
acagcccgtcccctgccagccgtgagcgctcctcctccctgcagggcatggacatggcct
cgctgcccccacgcaaacggccgtggcacgacggcccgggcaccggagaccaagactccc
cgggagcaggggtag
DBGET
integrated database retrieval system
