Oncorhynchus kisutch (coho salmon): 109882135
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Entry
109882135 CDS
T09179
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
109882135
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109882135
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
109882135
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Gene cluster
GFIT
Motif
Pfam:
Slowpoke_C
BK_channel_a
Ion_trans_2
Ion_trans
Lig_chan
Motif
Other DBs
NCBI-GeneID:
109882135
NCBI-ProteinID:
XP_031661247
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Position
LG3:complement(37185405..37202527)
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AA seq
1098 aa
AA seq
DB search
MVTASIYTYTTPPTFAPHIYWHIPMAMKIPHTYPPISHTHCLYRGHRLWWAFLLSSLSVF
LAGLLALLLWKVAHRGFNSIGIFRPRRQRWAHRQSISVQTDFNLRNALKEWAFSVISAQH
LPGKVLMVLIFCFNIGSIVTYITLSTDPVESCMKEYSIAFLIDLGFNICHLLYFGLRFLA
AQDKLMVWVDLRSLVDFFTIAPSFVTLFSRRAWLGLRFIRALHILELPVVLQILNVFNSN
STTLKLSRLVAILTGTLLTSAGFIHLLENSGDPWLDFSNPQPLHYFECVYFLVVTMSTVG
YGDVELRTTLGRLFVIIFIFIGLGLFANFVPEVVQIIINRKRFDGSFTGVSGKTHVVVCG
HITLSSASAFMKDFLHEDRGEVDVKVLFLGNFRPNQELEAFFLRWFLKVTFYQGSVMQRR
DMERVKMHKAGACLIICDRFTSDQHKEDAANLMRVISIKQYCPNTRIIVQMLKHNSKAFL
QNVPNWDWSRGDAVICLAELKLGFMSQSCLVPGLSTLLTNLFTMQSEIEQDGDTWQNLYR
EGLYNEIYTEHLSPSFIGMSFAQASKLCFLKLRLLLIGIEYQSGDQDFNVLVNPPSHIKI
KLWTLGFLIASNASDARRASMYCSVCHRDIKDLPRMRPCRCTEQKDVSSNTSAMSLGFRR
PSLGVLPFSPEGETLRERECVWEQQQQEEQQEVGLDSTGLFHWCPPVPLKDISLTRQSAS
TLALQDHVVVCVFGDGGSSLLGLGDFMMPLRASSLTAPELRTVVFLGDPHYFSREWPNIQ
YFPHIYFLPGSPLCGADLRALRVERCAMVVVLSSLSSSSDIEPSMQDKETIHFCVNLYHI
RFSPEPGPHCTLSHTQSHGHGQGLELGHGFGGHNHGPSHDTLDFSHIPTIPEKAEVTPAH
SAGTTVPLLVELVNSSNVCFVNEADSQEDSSSLTLSQAFSVGSVFSVDLLDSLMAATYFN
ANVPGLICTLVTGGDTPLLEAQLAEDNQLRGGEMSVKMWALRQRSKLAQLALQDEPLCSL
ACEDFKELFCQALDSLEILCFGLYRLLDPPNPSMKRFVITNPSAELPLLPSDRVFCSVPF
HQSHLLTLRRAKTISHRL
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggtgactgcctccatttacacctacaccaccccgcccacctttgctccacacatttat
tggcacatccccatggccatgaagatcccccacacttaccctcccatttcccacacccac
tgcctctaccgggggcacaggctgtggtgggccttcctcctctcctccctctctgtcttc
ctggcggggctgctggccctgctgctctggaaggttgctcacagagggttcaatagcatt
gggattttcagaccccgacgacagcgctgggcacacagacagagcattagtgtgcagaca
gatttcaatctgaggaatgccttgaaggaatgggcgttctctgtgatatcggctcaacat
ctgcctggcaaagtcctaatggtgctgatattctgtttcaacatcggctccatcgtgacc
tatatcaccctctctactgacccagtagagtcctgcatgaaagaatacagcatagctttc
ctcattgatttgggcttcaacatctgccaccttctgtattttgggctcaggtttttggcg
gcccaggataagctgatggtttgggttgacttgagatccctggtggattttttcaccatt
gctccttcctttgttaccctgttttcccgtcgagcctggctgggtctgaggttcatcaga
gctctgcacatactggagttaccagtcgttctgcagattctcaacgtcttcaacagcaac
agcaccactctgaaactctcccgcctggttgccatcctaacaggcacactgctgacctca
gctggtttcatccacctgctggagaactcaggtgacccctggctggacttctccaacccc
cagcctctccactactttgagtgtgtttacttcctggttgttaccatgtcaacggtgggc
tatggtgacgtggagttgaggacgaccctgggacgcctcttcgtcatcatcttcatcttt
attggactgggtctgtttgccaactttgtcccagaggtggttcagatcatcatcaacagg
aagaggtttgatggaagcttcacgggtgtctcaggcaagacccatgtggtggtgtgtggt
cacatcactctgagcagtgcctctgccttcatgaaagattttctacacgaggacagggga
gaggtcgacgtcaaggtgctcttcctgggaaacttccgtcctaaccaggagctggaggct
ttcttcctgaggtggttcctgaaggtcaccttctaccagggctcagtgatgcagaggaga
gacatggagagagttaagatgcataaagcaggagcttgcctgatcatctgtgacaggttc
acctcagaccagcataaggaggacgctgccaatctcatgagggtgatctccatcaaacag
tattgtcccaacaccaggattatagttcagatgctgaagcacaacagtaaggcgttcctg
cagaacgtgcctaactgggactggagtcgaggtgatgcagtgatctgcctggcagagctc
aaactgggtttcatgtctcagagctgcctggtgcctggcctctccacgctgttgaccaac
ctgttcaccatgcagagtgagatcgagcaggacggagacacatggcagaacctgtacaga
gagggcctctacaatgagatctacacagaacacctgtccccctccttcatagggatgtcc
ttcgctcaggccagcaagctatgtttcctgaagctgaggttgctgttgattgggattgag
tatcagagcggagaccaagatttcaatgtgttggtgaatcctcccagtcacatcaaaata
aagctgtggactctgggtttcctcatagccagcaatgccagtgatgccagaagggcgagt
atgtactgctctgtgtgtcacagagacatcaaggatttgcccaggatgagaccctgcagg
tgcactgagcagaaagatgtctcatctaacacctccgccatgagtctaggcttcagacgt
ccatcactgggagttctgcccttcagcccagagggagagactcttcgagagagggagtgt
gtgtgggagcagcagcagcaggaggagcagcaggaggtggggctggactctacaggactg
ttccactggtgcccacctgttcccctgaaggacatctcactgaccagacagagtgccagt
accctggcactgcaggaccacgtggtggtgtgtgtctttggggacgggggctccagcctg
ctgggcctgggggacttcatgatgccgttgagggccagcagcctgactgccccagagctg
aggacggtcgtcttcctgggagacccacactacttcagcagggagtggcccaacatacaa
tacttcccccacatctacttcctgcctggctctcctctgtgtggggcagacctgcgtgcg
ttgagggtggagcgctgtgccatggtggtggtcctcagctctctgtccagctccagcgac
attgagccctccatgcaggataaggagaccatccacttctgtgtcaacctctaccacatc
cgcttcagccccgaaccaggcccacactgcacactcagtcacactcaaagtcacggccac
ggacaggggctggagcttggtcatgggtttggtggtcataaccatggtccgagccacgac
acactagacttttcccacatccctacgatacccgagaaggctgaggtcacccctgctcac
agcgccggcaccactgtccctctgctggtagagctggtgaacagctctaacgtgtgcttt
gtgaacgaggcggacagccaagaggactcctccagcctgaccctgagccaggccttctct
gtaggctccgtcttctctgtcgacctactggactctctcatggcagccacgtacttcaac
gccaacgtgcctggtctgatctgtacgctggtgacgggtggcgacacccccttactggag
gcccagctggcagaggacaaccagctgcggggaggggagatgtccgtgaagatgtgggcg
ctgcgccaacgctccaaactggcacagctggcactgcaggatgagcctctctgtagcctc
gcttgtgaagacttcaaggagttgttctgccaggctctggactcgttggagatcctgtgt
tttgggctgtatcgcctgctggacccacctaacccctccatgaagaggtttgtaatcacc
aacccgtcagcagaactcccgttgttgccttcagacagagtcttctgctctgtacccttc
caccagagtcacctgctcaccctgaggagagccaagaccatcagtcaccgcctatga
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