Oncorhynchus kisutch (coho salmon): 109902553
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Entry
109902553 CDS
T09179
Name
(RefSeq) procollagen galactosyltransferase 2 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00310
Lysine degradation
oki00514
Other types of O-glycan biosynthesis
oki01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
109902553
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
109902553
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oki01003
]
109902553
Enzymes [BR:
oki01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
109902553
Glycosyltransferases [BR:
oki01003
]
O-Glycan biosynthesis
O-linked Gal type
109902553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
109902553
NCBI-ProteinID:
XP_020354586
Ensembl:
ENSOKIG00005035832
LinkDB
All DBs
Position
LG13:34187090..34227135
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AA seq
626 aa
AA seq
DB search
MMPVVGAVGVGLLCALLVALMPGGMSDLVTLVQDSVRPESSLLMPKVMIAILARNAAHSL
PHYLGCIDRLDYPKERIAIWAATDHSVDNSTAMLREWLKQAQDQYHYVEWRPMEEPKSYT
DEWGPKHWPPSRFNHVMKLRQAALKAAREHWADYILFADGDNLLTNPKILNLLMAENLTL
VAPMLESRSLYSNFWCGITPQGYYKRTPDYQPIREWKRLGCFAVPMVHSTFLLDLRRGAS
RELAFYPPHPDYSWAFDDIMVFSFSARQADVQMYVCNREHYGFLPVPLKASQNVDDEMES
FTHTIAEAMTFLSAHENVDHNIAPSEYLYNPEMPQDKMGFDEIFLINLKRRLDRRQRMLS
TMASLGLQATITDAVDGKALNSSQLQALGIEMIPGYQDPYSGRVLTRGEIGCFLSHHSTW
VQMAERGLSKVLVLEDDVRFEPRFKRRMMTIIEEVEKAQLDWDLIYVGRKRMQVHQPERS
VEGVNNLVEADYSYWTLGYALSAQGARKLLAAQAFSKMLPVDEFLPVMFNKHPNSDFMSH
FEPRDLKAFSVEPLLLYPTHYTGEPGYVSDTETSTIWDDEATATDWDRLHQHARKTEQQG
RIHTVAQNSVTGDSPPPAARSTRDEL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgatgccggttgttggagccgtgggagtcggactgctctgcgcgctgcttgtcgccctc
atgccgggtggcatgtcggacttggtgactctggtgcaggactcggtccgacccgaatcg
tcactgctgatgccaaaagtcatgatcgccattctggctcgcaacgcagcgcacagcctg
ccgcactacctgggctgcatcgacaggctagactatccgaaggagcggatagctatctgg
gcagcgacagaccacagtgtggacaacagcacagccatgctgagggagtggctgaagcag
gctcaggaccagtaccactatgtggagtggagacctatggaggagcccaagtcctatact
gatgagtgggggcccaagcactggcctccgtcccgcttcaaccatgtgatgaaactgaga
caggctgctcttaaggcagcacgggaacactgggcagattacatactgtttgcagacggt
gataacctgctgaccaacccaaagattctcaacctgctcatggctgagaacctgactctg
gtagctcccatgctagagtcacgctctctctactctaacttctggtgtggcatcacccca
cagggttactacaaacgtacccctgactaccagccaatcagggaatggaagcgtctgggt
tgcttcgctgtacccatggtgcactctaccttcctgctggacctgaggcgtggtgccagc
agggagctggccttctacccccctcaccctgactacagctgggccttcgatgacatcatg
gtgttctccttctctgcccggcaggcagatgtgcagatgtacgtgtgtaacagagagcac
tatggcttcctaccggttcctctgaaggcctcgcagaatgttgacgacgagatggagagc
ttcacacacaccatcgctgaggccatgacatttctctctgctcatgagaatgttgatcac
aacatagcaccctcagagtacctgtacaatcccgagatgccgcaggacaagatgggcttt
gatgagatattcctgattaatctgaaacgtcgtctggacaggagacagaggatgttgagc
accatggcctctctgggtctgcaggccaccatcactgacgcagtggacggcaaggctctg
aactcttctcagctgcaggcattgggtatagagatgattccaggttatcaggacccgtac
tctggccgtgttctaaccagaggagagataggctgcttcctcagccaccactccacctgg
gtacagatggcggagcgtggtctttccaaggtgctggtgctggaggatgacgtgcgcttt
gagcccaggtttaagagacgaatgatgaccatcatagaggaagtagagaaggcccagctg
gactgggatctcatctatgttgggcgtaagcgtatgcaggtgcaccaaccggagcgttcg
gtggaaggggttaataacctggtggaggctgactactcttattggacgctgggctatgcc
ctgtcagcgcagggtgccaggaagctgctggctgctcaggccttcagcaagatgctacct
gtcgatgagttcctccctgtcatgttcaacaaacaccccaattctgacttcatgtctcac
tttgagcctcgggacctgaaggccttctctgtggagcccctcctcctgtaccccacccac
tacacgggcgagccgggctacgtgagtgacacagagacctccaccatctgggacgacgag
gccaccgccaccgactgggaccgcctgcaccagcacgccaggaagacagagcagcaaggc
cgcatccacaccgtggctcagaacagtgtgacgggagactcacctccgcctgccgcccgc
tccacacgtgatgaactctga
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