Oncorhynchus kisutch (coho salmon): 109906701
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Entry
109906701 CDS
T09179
Name
(RefSeq) zinc finger protein GLI2
KO
K16798
zinc finger protein GLI2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
109906701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109906701
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
109906701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
109906701
NCBI-ProteinID:
XP_020360139
Ensembl:
ENSOKIG00005050940
LinkDB
All DBs
Position
LG16:40642208..40724313
Genome browser
AA seq
1519 aa
AA seq
DB search
MSRMETSAPTTTEKKGSGLDGNGFTDLPRKLSPSAVTRAPHHVFPTFHTPIPIDMRHHEG
RYHYEPHTLHAMHGPGLGGSPVMSDISLIRLSPHAAGTGESPFSPAHPYFNPHMEHYLRS
IHSSPTLSMISAARGLSPADLAHEHLKERGLFGFPPPPPGASPAEYYHLMTSHRNPYGEL
LMQGGAAAAAHLPDYITPMEASRFSSPRLTPRLNRKRALSISPLSDASIDLQTMIRTSPN
SLVAYINNSRSSSAASSSYGHLSVGGISPSFTFPHHINPMAYQQLLSQQRGLSVFGHTPP
LIQPPPIFSSRQSALGLSSLPPASHNHNNGSQSKNTCGDSAVSSTVNPMITKRSKVKTEV
EYPRPLSPCSPDHLGGMLGLKEDLDKDECKHEPEMVYETNCHWEGCSKEFDTQEQLVHHI
NNDHIHGEKKEFVCRWDECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCCKAYSRLE
NLKTHLRSHTGEKPYVCDHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKVPGCTKRYTDP
SSLRKHVKTVHGPEAHVTKKQRSDLPPSRPVPPKENGENETGRGTEEKMDSTSRGMEDYL
QVKSIKTEKSVMYQSSPGGQSSCSSEPSPLGSSTNHDSGVEMALHSGGGSMGDLTGLDDP
SGPLMDSSFSGLSSGTAGVGVGLHLRQHLGLSHIHGLEHLKKEKLKTARDSCQWANHHPA
PPVQNTKLPPIPASGSLLESGNMCGGPGSFSLSELCSSKVTVLNQLDNLMERRDSATSTV
SSAYISRRSSGISPCYSSRRSSDASAFSGHRHHNISSTGSYDPISADLSRRSSDASQCGG
GGGGGRLPSHLSLTPAQHYHLKAKYAAATGGAPPTPLPNMERMSFKTCLALYRDASQGDS
SSCYSSFDPVVPSGVPRRCSGDMGNYNGRSMMPHEAPSNIPRRASDPVPRRPSLDPLSHQ
PQVQRYNSTGNMQNLHPHASLPNQALSAAERRHLVLQSHQPRSDDSLQRYPYCPRPPSIS
ENVAMETMAGDMSGRRNSSEEEMMVLPDEVVHYITAQGGAGESDCANGYNRQAQCGFHGN
TINPNPQQQQQFYHQGRMAVVDTNMSMNPSSAPQTKRLSCALSPGHPKQSFPSSLSKTST
MPVQWNEVSSGTVEALHNPTQHLPFGRSNSNLAMVQQKQNFVSFQKQNLNSNQHIAQINH
NLAHAAQQGRYIQQQKTDSRLGCVQQQSLQQQQPANANLNERVRLDYGFNQGLGPIDANA
NQRSSCSSMAVGGTVHSVDTQNSRLRTQPGGSQSSQVTFKDSGVNSSRMISHQQKYNIAS
QVQHPIQNGGQILIQPRPPTEHKSLSRQHSGSMTIQRQNSIGNHCSNGNNTDNNVMFYTG
QIHVFGPNGNVNMQMMTSPVVDVLQCPSDSTETSMTSPGVNNQVSSTVDSSNGTGAEDPQ
IDFDTMLDDGDHSSLMSGTISPSILQSLSQTSSRLTTPRNSVTLPSLPLPAGGSNMAIGD
MSSLLTALAEENKFLSMMS
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaatggagacctctgccccgacgaccacagagaagaaaggctctggtctggat
ggaaacggcttcactgacctcccgaggaaactctcaccttcagctgtcaccagagccccg
caccacgtcttcccgacgttccacacgcccatcccgattgacatgcgtcaccacgaggga
agatatcactatgaaccccacaccctacatgccatgcatggtcctggactaggtggcagc
ccggtcatgtcagacatctctctgatccgtctgtccccccacgcagccgggacaggggag
tcccccttcagccccgctcacccctacttcaaccctcacatggagcactacctccgctcc
attcacagcagcccaaccctgtccatgatctctgcggcccgcggactcagccctgcagac
ttggcacatgaacacttgaaagagcggggtctgtttgggtttccccctccccctcctgga
gccagccctgctgagtactaccacctgatgaccagccatcgtaacccctacggagagctg
ctgatgcaggggggtgcggcggcagctgcacacctgccagactacatcacccccatggaa
gcgtcacggttctccagtcccagactgacccccaggctgaacagaaagcgagccctgtcc
atctcgcctctctcagacgccagcatcgacctgcagaccatgatccgtacctcgcccaac
tctctggtggcctacatcaacaactcacgctccagctctgcagctagcagctcctacgga
cacctctctgttggaggcatcagtccgtcctttaccttcccccatcacatcaaccccatg
gcctaccagcaactcctgtcccagcagagaggcctgagtgtgtttggccacacccctcct
ctcatccagcccccacccatcttctccagtcgccagtctgccctgggtctctcctctctg
ccccccgcctcacacaaccacaacaatggctcacagtcaaagaacacatgtggggactcg
gcagtgagcagtacagtcaatcccatgatcaccaagaggtcaaaggtgaagacagaagtg
gagtatccgaggccgctgtccccatgctctccggatcatctaggtgggatgctgggcctg
aaggaggacttggataaagatgaatgcaagcatgagccagagatggtgtatgagaccaac
tgccactgggaaggatgctccaaggagtttgacacgcaggaacaactggtccatcacatc
aacaacgaccacatccacggggagaagaaggagtttgtgtgccgctgggatgagtgttcc
agggagcagaagccttttaaggcccagtacatgctggtggttcacatgaggagacacacg
ggggagaaaccacacaagtgtacctttgagggctgctgtaaggcctattctcgcctggag
aatctgaagacccacctgcgatctcacaccggggaaaaaccatatgtgtgtgaccacgag
ggatgcaacaaagccttctccaacgcctcggacagagccaagcaccagaatcgcacacac
tccaacgagaaaccctacgtgtgtaaagtccccggctgtacgaagcgctacacggacccc
agctctctcaggaagcacgtgaagacagtccacggaccagaggcccacgtcaccaagaaa
cagcgcagcgacctgccgcccagcagacccgtgccacccaaagagaatggagagaacgag
acaggccggggcacggaggagaagatggacagcacctcgagaggcatggaggactacctg
caggtcaagtctatcaagacggagaagtctgtgatgtatcagtccagccctggtggtcag
tcgtcatgtagcagcgagccgtcgccacttggcagttccaccaaccatgacagtggagta
gagatggccctccacagcggcgggggcagcatgggggacctgactggactggacgacccc
tcggggcccctcatggactcctccttctctggcctctcatctgggacagcaggggtcggg
gtgggcctccacctacgtcaacacctaggcctcagccacatccacggactagaacacctg
aagaaggagaaactgaagacggcgagggactcctgccagtgggccaatcatcatccagct
cctccagtccagaacaccaagctaccgcccataccagcaagcgggtcccttttggagagt
ggaaatatgtgtggcgggcctggatcgttcagcctcagtgagctgtgttccagtaaggtg
actgtcctgaaccagctggacaatctgatggagcgcagggacagcgccaccagcaccgtc
tcctctgcctacatcagccgccgctcctctggcatctccccctgctactccagccgccgc
tccagcgacgcctccgcgttcagtggccaccgccaccacaacatcagctccaccggctcc
tacgaccccatctctgcagacctgtcccgccgctccagcgacgccagccagtgtgggggt
ggtggaggagggggacggctgcccagtcacctcagcctcacccccgcccagcactaccac
ctcaaggcgaaatatgcggcggctacaggcggagccccacccacacctttacccaacatg
gagaggatgagtttcaagacctgcttggccctctacagggacgcttcccagggagactcg
tcgtcttgttactcctccttcgaccccgttgtccccagtggggttcccaggcgctgcagc
ggcgatatgggaaactataacggccgcagcatgatgccccacgaagctccgtccaacatt
ccccgtcgggctagcgaccccgtcccccggcggccgtccctggacccgctgtcccatcag
cctcaggtgcagcgctacaacagcacgggcaacatgcagaacctccacccacatgcctcc
ctgccgaaccaggccctgtctgcagccgagcggcgccacctggtgctccagagccaccag
ccgcgctccgacgacagcctgcagcgatacccctactgcccccggccgcccagcatctct
gagaacgtggccatggagaccatggccggcgatatgagcggtagacgcaacagcagtgag
gaggagatgatggtacttccggatgaagtcgttcactacatcaccgctcagggcggagct
ggtgagtcagactgtgccaacgggtacaaccgacaagcacaatgcggtttccatggaaac
acaataaaccctaacccccagcaacaacagcagttttaccaccagggaaggatggctgtg
gtggacaccaatatgagtatgaacccttcgtctgcaccacaaaccaagcgcctctcctgt
gccctaagcccaggccatccgaagcagtctttcccctcctcactcagtaagacgagcacc
atgccggtacagtggaatgaggtcagctcagggactgtggaagctcttcacaacccaacc
caacatctgccgttcggtcgaagcaactcaaacctcgccatggtccaacagaaacagaac
tttgtctcgttccagaagcagaatcttaactccaaccaacacattgcacagattaaccac
aacctggctcatgcagcccagcaggggagatacatacagcagcagaagacagactccagg
ctgggctgtgtacagcaacagagcctacagcaacagcagcccgctaatgctaacctcaat
gaacgagtgagactcgattacgggtttaaccagggtctcggtcctattgatgctaacgct
aaccagcggtcctcctgtagtagtatggcagttggtggcacagtgcacagtgtagacacg
cagaacagccgactgaggacgcagccaggggggagtcaatcgtctcaagtcacatttaag
gatagcggtgtgaattcttcgcggatgatctcacatcaacagaaatataatatagcgtcc
caggttcagcatcctatacagaatggaggtcaaatactcatccagccaagaccgcccaca
gaacataagtctctaagcagacagcattcagggtcaatgacaatccagcgacaaaactca
attggcaatcactgcagcaatggcaacaacacagacaacaatgttatgttctacacagga
cagatacacgtgtttgggccaaacgggaacgtcaacatgcagatgatgacatcaccagta
gtggatgttcttcaatgtccctcagacagcactgagacctccatgacctcaccgggagta
aacaaccaggtctccagtacggtggactcgtccaatgggacaggggcagaagatccccag
attgactttgacaccatgctggatgacggggaccactccagcctgatgtcaggcaccatc
agccccagtatcctccagagtctgtcccagacctcctccagactcaccaccccccggaac
tctgtcaccctgccctccctgcccctccctgcagggggcagcaacatggccatcggcgat
atgagctccctgctcaccgcgcttgcagaagagaacaagttcctcagcatgatgtcataa
DBGET
integrated database retrieval system