Oryzias latipes (Japanese medaka): 100304458
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Entry
100304458 CDS
T02443
Symbol
ppara
Name
(RefSeq) peroxisome proliferator-activated receptor alpha
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03320
PPAR signaling pathway
ola04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
100304458 (ppara)
03320 PPAR signaling pathway
100304458 (ppara)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
100304458 (ppara)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ola03310
]
100304458 (ppara)
Transcription factors [BR:
ola03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100304458 (ppara)
Nuclear receptors [BR:
ola03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
100304458 (ppara)
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
FERM_M
Motif
Other DBs
NCBI-GeneID:
100304458
NCBI-ProteinID:
NP_001158347
UniProt:
A0A3P9JYD4
C4B6E0
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Position
23:complement(6734349..6762926)
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AA seq
480 aa
AA seq
DB search
MAAELYSPPSPLGDSLLDSPLCGDLIEDLRKISASIGDNSLEFDFPECQRNDSGAKSSVM
PDPLTPASSPSPEVCGAAPAAEDSVGPLSLECRVCSDRASGFHYGVHACEGCKGFFRRTI
RLKLEYNKCERNCKIQKKNRNKCQYCRFNKCMIVGMSHNAIRFGRMPHAEKLKLKEESKV
AEKEVESCMEGDGKTLVRQIHDAYMKSFTMNKAKARLILTGKTSEPPFIIHDMDTFQLAE
RTLAAYMAHMVKGERLESESELRVEHVTPAGECEELQQREAEARLFHCCQSTSVETVTEL
TEFAKAMPDFKTLDLNDQVTLLKYAVHEALFTLLASCMNKDGLLVARGRGFITREFLKSL
RRPFSDMMEPKFQFATRFNSMDLDDSDLALFVAAIICCGDRPGLVDIPVVERLQESIIQA
LRHHLLANHPDDTFLFPRLLQKLADLRELVTEHAQLIQEIKTLEDTSLHPLLQEIYKDMY
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaactgtacagccccccgtccccactgggagattccctcctggacagtccg
ctgtgtggagacttgattgaggatctccgtaagatctctgcgtcgataggcgacaactcg
ctggaattcgacttcccggagtgccagaggaacgactccggggccaaaagctctgttatg
ccggaccccttaactccagcctccagtccttcaccagaggtgtgtggagcggccccggca
gcagaggatagcgtcgggcccctcagcctggagtgtcgcgtgtgctcagaccgagcttca
gggttccactatggcgtgcacgcgtgtgaaggctgcaagggtttctttagaagaaccatc
aggctgaagctggagtacaacaaatgtgaacgcaactgtaagatccagaagaagaaccgc
aacaagtgccaatactgcaggttcaacaagtgtatgattgtggggatgtcccacaacgcc
atccgcttcggtcgcatgccgcatgcagagaagctgaagctgaaggaggaaagcaaggtg
gcagaaaaggaagttgaaagctgcatggagggagacggtaagactctggtcaggcagatt
cacgacgcctacatgaagagcttcaccatgaacaaggcaaaggcgcggctcattctgacc
ggaaagacgagcgaaccgccttttattatccacgacatggacacgtttcagctagctgag
aggacgctagctgcctacatggcccacatggtaaaaggtgagcgtttggagtcggaaagc
gagcttcgggttgaacacgtgactccagccggggagtgtgaggagctccagcagagggag
gccgaagccagactgttccactgctgccagagcacgtccgtggagacggtcaccgagctg
acggagttcgccaaggccatgccagacttcaagaccctggatttaaacgatcaggtgacc
cttctgaaatatgcggtccacgaagcgcttttcacccttttggcgtcctgtatgaacaaa
gatggtctcctagtggctcgtggaagaggctttatcacacgcgagttcctaaagagtctg
cgacgaccgtttagcgacatgatggagccaaagttccagtttgcgacgcgcttcaactca
atggacttagacgacagtgacctggcgcttttcgtggccgccatcatttgctgtggagac
cgtccaggtctggtggacataccggtggtggagcggctgcaggagagcatcattcaggcg
ttgcggcaccacctgctggccaatcaccccgacgacactttcctgttccccagactgctg
cagaagctggctgacctcagggagctcgtcacagagcacgcgcagctcattcaggaaatc
aaaacactagaggacacatcgctgcacccgctcctgcaagaaatatacaaagacatgtac
tga
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