Oryzias latipes (Japanese medaka): 101156538
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Entry
101156538 CDS
T02443
Symbol
dcaf6
Name
(RefSeq) DDB1- and CUL4-associated factor 6 isoform X1
KO
K11795
DDB1- and CUL4-associated factor 6
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101156538 (dcaf6)
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
101156538 (dcaf6)
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Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
101156538
NCBI-ProteinID:
XP_011487529
UniProt:
A0A3B3ILL6
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Position
21:complement(3905872..3945561)
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AA seq
967 aa
AA seq
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MVTMSCTGNLVWDVNKRLIGYNEPNTIRTNYLGRREFVQRLKLESTLNVHDGCVNTISWN
ETGEYILSGSDDTFLVITNPYNKKVKTSIRSGHRANIFSAKFMPHTNDQEIISCSGDGII
YYTHTEKSPEHNRQCQFTCHYGTAYEIMTVPNDPCTFLSCGEDGTVRWFDLRMKTSCTKE
DCKDDILINCRRAATSISISPLVPYYLAVGCSDSSVRIYDRRMLGTRATGNYTGRGTTGM
CVRFVPAHLSNKSCRVTSLCYSEDGQEVLVSYSSDYIYLFDPKDDQARELKGPSEDRREE
LRQPPVKRLRLRGDWSDTGPRARPESERERDGEQSPNVSLMQRMSDMLSRWFEEASEAQS
SRGARPQARPRGTAVRPEGGINNPPAPAVDSTQEPNAPERPSGPNPPEEPASAAEAAAAA
TLKSRSSSSSGSSSTVTATPTSSSSPLESSAPSSSPIASSPDSEQRSQTDGTEMPTATPT
SEPTVSEYSPRRLPISLVCRRLQRLLRLGDPPGQAQRAASSSSPSSSPAASERRTQRSAP
PPPPPAAAADSPSSVVNKQLGSMSLDEQQGAAGAAGPPHDESVAAGASSSVPPATTSVST
SRPNTAEPVLSLHYSSEGTTTSTIKLDFTDEWSSSRSSSLGGGDPKTLEPSAPPSKESRT
PESSASQQARSESSERQSPPAPSAEPPCSSSGSAGPSRSGPEEGSPERVSAEATRDRNPS
GASEDTSGGCRRAEPAGEEGEGSQSQPARGRQDSDDSDDDPIPIPMSRLRGQGQSSRGSA
VGDRMIRRSAAARIQELFRRRKERREMEESETQNIRRPSVKMVYKGHRNSRTMIKESCFW
GNNFVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNCLQPHPYDPILASSGIDYDIKIWS
PLEESPSFNRQLAVEVITRNELMLEETRNTITVPASFMLRMLASLNHIRSDRLEGDRSEG
SGQENED
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggtcacaatgtcctgtactggaaacctggtttgggatgtcaataaacgcttaattgga
tacaacgaaccgaacaccatcaggactaactacttggggagaagagaattcgtccagagg
ctaaagcttgaatccactctgaatgtgcacgatggctgcgtcaacacaatatcctggaac
gagacgggcgagtacatcttgtcggggtcggatgatacatttctggtcatcacaaaccct
tacaacaaaaaggttaagacatccatacgctcaggtcatcgtgcaaacatcttcagcgct
aagttcatgccccacaccaacgatcaggagatcatctcctgctcaggagacggcatcatc
tactacacccacacggagaagagtcccgagcacaacagacagtgtcagttcacctgccat
tacggaacggcttacgagattatgaccgtaccaaatgacccgtgcaccttcctgtcgtgc
ggagaggacggcacggtccggtggttcgatctgcgcatgaaaaccagctgcactaaagaa
gactgcaaagacgacatcctcataaattgccggagagctgctacgtccatatcaatatct
cctctggtgccgtactatctggctgtgggctgctctgacagctcggtgcggatctatgac
agacgcatgttaggcacccgagccacaggtaactacacgggtcgaggaacgaccggcatg
tgtgttcggtttgttcccgcccacctgtccaacaagtcctgcagggtcacgtcgctctgc
tacagcgaggacggtcaggaggtgctggtcagctactcctccgactacatctacctgttt
gaccctaaagacgaccaggcgcgggaactcaagggcccgtccgaggataggagggaggag
ctgaggcagcctccagtgaagcgcctgcgcctgagaggggactggtccgacaccggaccc
cgagcccgtccggagagcgaaagggaaagagacggagaacagagtccaaacgtgtcgctg
atgcagaggatgtccgacatgttgtcccggtggtttgaggaggccagcgaggcccagagc
agcagaggagctcgcccgcaggctcggcccagaggaacagctgttcgtcctgaggggggg
atcaacaacccccctgccccagcagtcgactccacgcaggagcccaacgcccccgaaagg
ccttcggggccaaaccccccagaggaacctgccagtgccgcagaagccgccgccgccgcc
acactaaaatccaggtcctcttcatcttcgggatcatcctctacagtcacagcaaccccc
acgtccagctcctccccactggagagctccgccccttcttcctcaccaatcgcgtcctct
cccgactccgagcagaggagtcagaccgatggaacggagatgccgactgccacgcccacc
tctgagcccaccgtctcagaatacagtccgcgccggttgcccataagtttagtgtgtagg
cgtttgcagaggttgctccggctgggcgaccccccaggacaggcccagagagcggcctcg
tcctcctctccttcctcctccccagcagcctctgagagacggacacaaagaagtgctcct
cctcctcctccccctgctgctgctgcagattccccctcgtctgtggttaacaaacagctg
ggatccatgagtcttgatgaacagcagggagctgcaggagctgcaggcccccctcatgat
gaatctgtggccgcaggagccagcagcagcgtgccgccggccaccacctcggtgtccacc
agccggccaaacacagcagaaccggtcctcagcttgcactacagctcagagggaaccacc
accagcaccatcaagctggacttcacagatgagtggagcagcagcaggtccagctctctg
ggcggcggagacccaaaaaccctggagccttctgccccccccagcaaagagagccggacg
cccgagagttcagcctcccagcaggctcgcagtgagtcctcggagcggcagagtcccccc
gccccctccgccgaacctccctgctcctcttccggttctgccggtcccagcaggtcgggc
ccggaggagggttcgcctgagcgggtcagcgcggaggcgactcgggacaggaacccgtcg
ggggcttcagaggacacgtcagggggctgcaggagggcggagccagctggagaggagggg
gagggcagccagagtcagccggcgcgcggccgccaggactccgacgacagcgacgacgat
cctattcccatcccgatgtccagattaagaggacagggtcaaagttccaggggatcggca
gtaggagataggatgatcaggcgctcggctgcggctcgcatccaggagctgtttcgcagg
aggaaggaaaggcgggagatggaggagagcgagacgcagaatatcaggaggccttccgtc
aaaatggtctacaagggccaccgtaactctaggacaatgattaaggagtcgtgcttctgg
ggaaacaactttgtgatgagcggctcggactgcggacacatcttcatctgggaccgacac
accgccgagcacctgatgctgctggaggccgacaaccacgtggtcaactgcctgcagccg
cacccttacgaccccattctggcctcttctgggatcgattacgacataaagatatggtcg
ccgctggaagagtcgccgtctttcaacagacaactggctgttgaggtgataacccggaac
gagctgatgctggaggaaaccaggaacaccatcaccgtcccggcttccttcatgctccgc
atgctggcctccctcaatcacatcagatcagatcgactggagggcgaccgctctgaaggc
tcaggccaggaaaacgaggactag
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