KEGG   Oryzias latipes (Japanese medaka): 101159817
Entry
101159817         CDS       T02443                                 
Name
(RefSeq) period circadian protein homolog 3 isoform X1
  KO
K21945  period circadian protein 3
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ola03400]
    101159817
DNA repair and recombination proteins [BR:ola03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    101159817
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 101159817
NCBI-ProteinID: XP_004069203
UniProt: H2MMM3
LinkDB
Position
5:28606474..28622707
AA seq 1264 aa
MCDQSAVMPGGDSGLDGEKSAFLSTTSEGLGEENEASVDQDGRAHPEHLRGEESGASGGE
LGQEDEEMTSGSHDLSSSANHSPGSAAGSTVASSKSEHADGDKGQAHREVMVTVAEMKKR
LPVDKRSRIKVSTVEALHYALNCVKQVQANSEYYKLLMRNGQDDQKDATLCTLEELERVT
SEHTLKNTDSFIVVFSLSSGHVLYASEQAPSILCCKRKFLESAKFVELLFHQDVNVFYSH
TAQPHLPPWSNSHTAGVLFDCAQVKSFFCRIRGGKDREGEMRYNPFRVTPYQLKVQGAAN
GGEDEEPCCLALAERIISGYEAPRIPMDKRIFTTTHSPGCVFLEVDERAVPLLGYLPQDL
IGTSLLTSIHPEDRPLMLSMHRKVLKYAGQHPFEHSPVRMRCQNGDYITLDTSWSSFINP
WSRKVAFIIGRHKVRTSPVNEDVFAAQTKNEVPVSHEEIKDLQAKIYKLFLQPVHNNGSS
GYGSLGSNGSHEHYISVASSSDSNGNLWEDSHQQPMTLLQICADVNRVKSWGQHAYRDSC
QKVAHRGKLATAAQPPSASNPKGRNNGESRKPTHIPSYQQINCVDNIFRYLEGCTTSVLK
RKSDSHSLATSSSSSSTSEDDKPLGGTDKSQSSSHVVVLDSEVSVGPATAAVVGAPLTDI
TMSTKAMSDVSVTSQCSYSSTIVHVPQPESEATALEDAPMGSEPADAAATPVRPAPSPAA
EERRFLGLTKEVLSAHTQKEEQDYVDRFRHRILQSPYSAYLQGDNSSMAQSHQPEGYLRP
LSAGGWNRSLRGKPRHKRPKAQGSSGSPASHASPPRRAPDSSWPSSESTQPQMGVANSQT
SPPQLPYLSEELHRSQQPPGATPVMSAGQFSYNYNIMQSAQSQAGIQPVQMVPLQNLQNV
QNFDNLQSAQNFNPYMAPVMAVILPNYPTITPGFPPMYLPANPTAIPQASVGMAGFVPGG
APLSFTTSFQPQPCPNAQTSPRSFICSPRACSSAGEEEEAAGHPALFSSSRSSSPLQLNL
LQEELPKQSEGQSSTGLNHSESLHENPNEADAPSESGNQDSQSTSSELLDLLLQEDARSG
TGSNASGSGSGESGGSLGSGSGSNGTSTSHTGSTNSSKYFASNDSSETSRKARKSQETPP
EHQHSFDTPVENPLWSMIQNTPERVMMTYQIRSRDQSLVLAEDKEKLRVLQPLQPWFSQE
QKEELADVHPWMQRHTIPQEIDMQGCVDCSSGAGLDHSPHPPDPDSSSPVESSEQDSIRP
VDGS
NT seq 3795 nt   +upstreamnt  +downstreamnt
atgtgcgatcaaagtgcggtgatgccagggggtgacagtggtctggatggagagaagtct
gcttttctgtcaaccacatcagagggtttaggggaggagaatgaagcatcagtggaccag
gatgggcgggctcatcctgagcacctcaggggagaggagagtggagcctcgggaggagaa
ctggggcaggaagacgaggagatgacgagtggttctcatgatctatcctcttctgccaat
cacagccctggaagtgctgcaggatccactgtggcttcttcaaagagtgagcatgcagat
ggagacaaagggcaagcccaccgagaggtgatggtgacggtggctgagatgaagaagagg
cttccggtggacaaacgcagccgcatcaaagtcagcactgtggaagccttgcattatgca
ctcaactgtgtcaagcaagtacaagctaacagtgaatactacaaactactcatgcgaaat
ggacaggatgaccagaaggatgccacactctgcactctggaagagctggaaagagtcacc
tctgagcacaccctcaaaaacacggattccttcatcgtggtgttctcgctgtccagtggc
cacgtgctttatgcatcagagcaggctcccagcatcctgtgctgcaagaggaagtttctg
gaatctgccaagtttgtggagctgctcttccaccaggatgtgaatgttttctactcgcac
acggcgcagccacatttgcccccatggagcaactcacacactgctggagttctgtttgac
tgtgctcaagtcaagtccttcttttgcagaataagaggcgggaaggaccgtgagggcgag
atgcgttacaatccgtttcgggtcacaccttaccagctgaaggtgcagggagcagcaaac
ggcggggaagacgaggagccatgttgcttggcgctagctgagcgcatcatctctggatat
gaagcgcctcgaatcccaatggacaaacgcattttcactacaacacactcccctggctgc
gtattcttggaagtggatgaaagggctgtgccgctgcttgggtaccttcctcaggatctg
attggcacatctttgctgacttccatccacccagaggaccgtcccctcatgctgtccatg
cacaggaaagttctaaagtatgctggccagcatccctttgagcactccccggtccggatg
cgttgtcagaatggagactacatcaccttggacactagctggtccagttttattaaccca
tggagccgcaaggttgcctttattatcggacgccacaaagtccggacgagtcctgtgaac
gaggatgtttttgctgctcagacaaagaatgaagttccagtttctcatgaagagataaaa
gaccttcaagcaaagatctacaagcttttccttcagccggttcacaacaatggctccagc
ggttatggtagtttgggcagtaacggttctcatgagcactacatcagcgttgcttcctca
agcgacagcaacggcaacctttgggaggactcgcaccagcagccgatgaccttgctgcaa
atctgtgccgatgtaaaccgagtcaaaagttggggccagcatgcctacagggattcctgt
cagaaagtggctcatcgtggcaaacttgccacagccgcacagcctccctcagcctctaac
cctaagggcagaaataacggcgagagcaggaagccaacccacattccctcttatcagcaa
atcaactgcgtggacaacatctttagatatttggagggctgtacaacttcagtcctaaag
cggaagagtgactctcattccttggccacctcctcttcctcatcatctacctcagaagat
gacaagcccctgggaggcactgacaaatctcagtccagctcccacgtggttgtgttggac
agtgaggtgtcagtgggccctgcaactgcagctgttgtcggggcacctctgacagacatc
accatgtccactaaggcgatgagtgatgtctcagtcactagccaatgttcatacagcagc
accatcgtccatgtgcctcagcctgagtcagaagccacagcactggaagatgctccaatg
ggcagcgagcctgctgatgctgccgcaacccctgtccgtccggcaccgagccccgccgct
gaggagcggaggtttttagggctcaccaaagaggtcctgtctgctcacactcagaaggag
gagcaagattatgtggaccggttccgccatcgcatccttcagagtccttacagcgcgtac
ctgcagggggacaacagttcaatggctcagtcccaccagccagaaggatatctgcgtcca
ctcagtgctggaggttggaatcgttctctaagaggaaagcccagacacaagcgacccaaa
gcccagggttcttcaggaagccctgcttcccatgcttctccgcctcgtcgtgctcccgac
tcttcctggccctcgtccgagtccacacagccccagatgggtgtggccaacagccaaaca
tccccaccccagttgccatacctttctgaggagctgcacagatcacagcagccgccagga
gcgactcctgtcatgtctgctggccagttcagctacaactataacatcatgcagtctgct
cagagccaagcaggtatccaacccgtccagatggtgcctcttcagaacctgcagaatgtt
cagaactttgacaacctgcagtcagcccaaaactttaatccgtacatggctcctgtcatg
gcagtcattctgcccaactatccaaccatcactccaggtttccccccaatgtacctgcct
gccaatcccactgcaataccccaagcatctgtgggcatggcaggctttgttcctggcggt
gctcctttatcttttactacaagtttccagcctcagccttgccccaatgcacagacctcc
cccagatcttttatttgctcaccgagagcttgctcctccgctggagaagaggaggaggca
gctgggcatccggctttattctccagctctcgctcaagctcccctttacagcttaacctg
ctgcaggaggagcttcccaaacaaagtgagggccagagcagcactggactcaaccactct
gaaagcctccatgaaaatcccaatgaggctgatgctcccagtgagtctggaaaccaggat
tcccagtcaacatccagtgagttgcttgacctcctgcttcaggaggatgccaggtcagga
actggttccaatgcctctggctctggttcaggggagtctggtggatcactgggatctgga
tcaggctccaatggaacctccacctcacacactggcagcaccaacagcagcaagtacttt
gccagcaacgattcatcagagacgtcacggaaagctcgcaagagccaggaaacgccgcca
gagcaccaacacagcttcgacaccccagtggagaaccccctgtggagcatgatccaaaac
acaccggagcgagtcatgatgacgtaccagatacgcagcagggatcagagtctggtttta
gcagaagacaaagaaaagcttcgagtgcttcagcctctccagccctggtttagtcaggag
cagaaagaggagctggcagacgtccatccatggatgcagcgtcacaccattcctcaggaa
atagacatgcagggttgtgtggactgcagctcaggtgcaggtttggaccactccccacac
ccgcctgacccagacagttcctcacctgtggaaagctctgagcaagattccatccgaccc
gtggatgggagctaa

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