Oryzias latipes (Japanese medaka): 101161262
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Entry
101161262 CDS
T02443
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101161262 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101161262 (exosc5)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101161262 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
101161262
NCBI-ProteinID:
XP_023818963
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All DBs
Position
15:complement(26312595..26315597)
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AA seq
219 aa
AA seq
DB search
MEVSAPSNVSLREFGCEQSLLSRPDGSASFVQGDTSVMAGVYGPAEVKVSKEIYDRATLE
VLVQPKVGLPSVRERSQEQCVRETCEEALLLTLHPRSSLTLVLQVLHDDGSLLSCCLNAA
CMALMDAGLPMSCLFCGVTCAISAYGQIITDPTSAQEKESRALMTFAIDSKERKVMMSST
KGSFSVHELQQCVAVSQRASERIFQFYRDSVRRRYSKSL
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggaggtttctgctccttcaaatgtttctctccgagagtttggctgcgagcagagttta
ctttctcggccggatggatctgcgtctttcgttcaaggggacacgagtgtgatggctgga
gtttatggacctgctgaagtaaaggtcagtaaggagatctacgaccgagcaactctggag
gtgctggttcagcccaaagttggtctgccgagtgtgagggagcgctcgcaggagcagtgt
gtgcgtgaaacctgcgaggaggcgctgctgctcaccctccaccctcgatcttcgctcacg
ctggtcctccaggtgctgcacgacgacggctctctcctgtcctgctgcctgaatgcagcc
tgcatggccctcatggacgcaggtctgccgatgagctgcctcttctgcggcgtgacctgc
gccatcagcgcatacgggcagatcatcactgaccccacctcagctcaggaaaaggagagt
cgagctttgatgacttttgccatcgacagtaaagaacgtaaagtaatgatgtcatccacc
aaaggatccttttccgttcatgagctgcagcagtgtgtagcggtcagccagagagcctca
gagaggatcttccagttctacagagactctgtgaggcggcgttactccaaatccctctga
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