KEGG   Oryzias latipes (Japanese medaka): 101161262
Entry
101161262         CDS       T02443                                 
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
  KO
K12590  exosome complex component RRP46
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101161262 (exosc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ola03019]
    101161262 (exosc5)
Messenger RNA biogenesis [BR:ola03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     101161262 (exosc5)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 101161262
NCBI-ProteinID: XP_023818963
LinkDB
Position
15:complement(26312595..26315597)
AA seq 219 aa
MEVSAPSNVSLREFGCEQSLLSRPDGSASFVQGDTSVMAGVYGPAEVKVSKEIYDRATLE
VLVQPKVGLPSVRERSQEQCVRETCEEALLLTLHPRSSLTLVLQVLHDDGSLLSCCLNAA
CMALMDAGLPMSCLFCGVTCAISAYGQIITDPTSAQEKESRALMTFAIDSKERKVMMSST
KGSFSVHELQQCVAVSQRASERIFQFYRDSVRRRYSKSL
NT seq 660 nt   +upstreamnt  +downstreamnt
atggaggtttctgctccttcaaatgtttctctccgagagtttggctgcgagcagagttta
ctttctcggccggatggatctgcgtctttcgttcaaggggacacgagtgtgatggctgga
gtttatggacctgctgaagtaaaggtcagtaaggagatctacgaccgagcaactctggag
gtgctggttcagcccaaagttggtctgccgagtgtgagggagcgctcgcaggagcagtgt
gtgcgtgaaacctgcgaggaggcgctgctgctcaccctccaccctcgatcttcgctcacg
ctggtcctccaggtgctgcacgacgacggctctctcctgtcctgctgcctgaatgcagcc
tgcatggccctcatggacgcaggtctgccgatgagctgcctcttctgcggcgtgacctgc
gccatcagcgcatacgggcagatcatcactgaccccacctcagctcaggaaaaggagagt
cgagctttgatgacttttgccatcgacagtaaagaacgtaaagtaatgatgtcatccacc
aaaggatccttttccgttcatgagctgcagcagtgtgtagcggtcagccagagagcctca
gagaggatcttccagttctacagagactctgtgaggcggcgttactccaaatccctctga

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