Oryzias latipes (Japanese medaka): 101162384
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Entry
101162384 CDS
T02443
Symbol
setd1b
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B isoform X1
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola00310
Lysine degradation
ola01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
101162384 (setd1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ola03036
]
101162384 (setd1b)
Enzymes [BR:
ola01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
101162384 (setd1b)
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
101162384 (setd1b)
HMT complexes
COMPASS/SET1 complex
101162384 (setd1b)
COMPASS/SET1 complex (yeast)
101162384 (setd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
N-SET
RRM_1
Motif
Other DBs
NCBI-GeneID:
101162384
NCBI-ProteinID:
XP_011480129
LinkDB
All DBs
Position
12:complement(13821386..13834916)
Genome browser
AA seq
1760 aa
AA seq
DB search
MSKPGERNRFNEDHGKKQSSSLANGMDSHPVCGSAEKRSHHWRSYKLIVDPALKKGSHKL
YRYDGQTFSMPNPGIPPVDMVRDPRIGRLWTKYKETDLPVPKFKIDECYIGPVPPKEVTF
ARLNDNIREGFLTDMCKKFGDIEEVEILYNPKNKKHLGIAKVVFENVKSAKVAVQSLHNT
SVMGNIIHVELDPKGENRLRYFQLLMNGSYTPKTLPVGVEEAREVSPRSLAEAILACERR
LSESSMAVVGGALPPSSSNTPLSLETGYSSLRQDTPQSQGTPHTPRQPGTPYSQDSNYSS
RQSTPAYQSGRTESSGSYKSRRHESKFQDAYNRRPERPQYRSNMYRNTPSEQSPFKQHQL
TPPEPPPSTPTFAYSAPPPATPNFKSAFSPYQTPLPPAFPPAEPAFHHPAQREGEYLRPP
QPPLPAAVDFVPVKERPETPPEPPPEPTAAPATPPPQTPERCPSPGSPVHDLERNSLDSR
IEMLLKEKRTKLLPFLEERDSDNEVQMEGSPISSSSSQLSPIPPYLGGQQNSRPCSTGLE
DISPTPLPDSEDDEPTPGVQLSAKRIGSPAADETGNSDLKNATLRGRSSTEKMESGHQSS
GEDMEISDDEMPGAPITSGDCSKDIVINSAVSPMHTHAIPPGYHPLQHQAGFAMHHHLAA
HLAAHPGVPPHMLAPISPYAPSMMPLMQMELMSRLQWSTVPMSFQMQQQMLSRMAQTRGP
YVYPHYMDSGAFAGPYQPLAMGATHANSAQEWQNPSIPKFNPTVPPPGYDGKKEDPHKAT
VDGVLLVIVKELKAIMKRDLNRKMVEVVAFRAFDEWWEKKEHSAKASLTPLKGSEGKEED
RPKPKETLGSSLLENWNKGEGLGYEGMGLGIGLRGAIRLPSFKVKRKDPPEAASASDNKR
ARPSTPVDDELEDEERDRDLTELPADESKMDADGLAKRRHSRPRVLDSEGEEEEDTSEKE
ESLSDREEGESDEVKVKDRLASGKKSGEEEDDGKDVGDSSGDSSSSDSSDDEAGSPASSK
ASSDSTSESSDSSSESSSSSEYELSSDDEDDQVSEEGRKGPRTPSSSSSSSSSSSSSEDE
GEAGVRPPSPPTGPLVEVKEEHEEREEVSSKHKRRPPSPEEVSAKDLKPTLPKVKEEDIQ
TDGGAAVGKSEPAEHAANLRPPTPTGTLPDSDQETKAKEVRSLLHPPSVPIPEFAQRARL
PTEEDIPRTPGRDLMERARGLGKSQSTDTVPITPGSDAPLTGSSLLLSSPHIPGSPFSYP
AQSPVLSAGLPRTPGRDLTFTPVFPDPAVLTLNRKISSESLDDKPVFKEPPLNSLPHQTQ
SAGSELSTSVPEDLSSDLSVDVPEPSDSTPSKKKIGRPKGKKGLAASPAHESLELSAESE
PLPPEAHLEDPSIHAISAESPKHRTLDFREEGSKPQTVLPAEDGLLSCDEDSPVVAKSTR
RSRRCWEELLRGSLSPVTTPPRSYFTRRSDFEEMTILYDIWNEGIDEEDIRLLQITYDKM
LQQDNGNDWLNDTLWVNHPPTNIPVVKKKRRDDGMRDHATGCARSEGYYKIDKKDKIKYL
QSSRLLSEEPPVDTQGMSIPAQVQASSRAGSERRSEQRRLLSSFACDSDLLKFNQLKFRK
KKIRFCKSNIHDWGLFAMEPIAADEMVIEYVGQNIRQVIADMREKRYEEEGIGSSYMFRV
DHDTIIDATKCGNFARFINHSCNPNCYAKVITVESQKKIVIYSRQPINVNEEITYDYKFP
IEDEKIPCLCGAENCRGTLN
NT seq
5283 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccaggggagaggaacagattcaacgaagaccatggcaaaaagcagagttca
agtctggcgaacggcatggacagtcatcccgtgtgcggctcagcggagaagcggagtcac
cactggagaagttacaagttgatagtggacccggcgctgaagaagggctcccacaaactg
taccgctacgatggacagactttcagcatgcctaaccccgggatccccccggtggacatg
gttcgagacccgaggatcggtcggctctggacgaaatataaggagacggacctccctgtg
cctaaatttaagatcgatgagtgctacatcggccccgtgcccccgaaggaggtgacattc
gcccggctcaacgacaacatccgggaggggtttctcaccgacatgtgcaagaaattcgga
gacatcgaggaggtggagatcctgtacaatccgaagaacaagaaacacctgggaatagct
aaagtggtttttgagaacgtcaagtctgccaaggtggccgtgcagtcgctgcacaacacc
tcagtgatgggaaacatcatccacgtggagctggacccaaaaggtgagaaccgcctgagg
tacttccagctcctcatgaatggcagctacacgccgaaaaccctgcctgttggggtggag
gaggccagggaagtgtcccctcgcagtctggctgaagcaatactggcctgtgagcgtagg
ttgtcggagagcagcatggcggttgtgggaggggctttgccgcccagcagctccaacacg
cccctcagcctggaaacgggctactccagcctgaggcaggacaccccgcagtcccaggga
acccctcacacgccacgccagcccggtacgccctactctcaagactccaactactcgagt
cggcagtccacgcctgcgtatcagtccggccgcactgagagctctggcagctacaagtct
cgccgccacgagagcaagttccaggatgcatacaaccgcagaccggagcggccgcagtat
cgcagcaacatgtatcgaaacacgccatccgaacagtcgccctttaaacagcaccagctc
acccctcccgaacctccaccctccacacctacctttgcctactctgcacctccacctgct
acgcccaactttaagtccgccttttccccctaccagactccattacctcccgctttcccc
ccggcagaaccagctttccatcacccggcccagagggagggggagtatctcagaccgccg
cagccgcctctgccagctgcagttgactttgtaccggtcaaggagagaccagaaaccccc
ccggagccgccaccagaacccacggcggctccagctacccctcctccccaaacgccggag
agatgcccctcacccggctcccccgtgcacgatctggagcggaacagtctggactcccga
atcgagatgctcctcaaggaaaaaaggacaaagctgctgcccttcctggaggagagggac
tcggacaatgaggtgcaaatggagggaagtccaatctcctcctcatcctctcagctgtcc
ccgatcccgccttacctcggcgggcagcagaattcccgtccgtgtagcacaggcttggag
gacatcagcccgactccactgccggactcggaggacgacgagccaactcctggagtccaa
ctgtcggccaagagaatcggctctcccgccgccgacgagacgggcaacagtgacctcaag
aacgccactttacgaggccgctcctccaccgaaaagatggagtcgggtcaccagtcctcg
ggggaggacatggagatctcagacgatgagatgccgggcgctccgatcaccagtggagac
tgcagcaaggacatcgtaataaactctgcggtgtctcccatgcatacccatgccatccct
cccgggtaccaccccttacagcaccaggccggcttcgctatgcaccaccacctggccgct
cacctggccgctcaccccggggtgcctcctcacatgttggcacccatcagcccctacgcc
cccagcatgatgccgctaatgcaaatggagctgatgagccggctgcagtggagcaccgtt
cccatgtccttccagatgcagcagcagatgctgagtcgcatggctcagactagagggccc
tacgtgtatccacattatatggacagcggtgcgttcgcagggccctaccagcctctggcc
atgggcgccacgcatgccaacagtgcacaggaatggcagaaccccagtatacccaaattc
aaccccaccgttcccccgcctggttacgacggcaaaaaggaggatccccacaaggcgacc
gttgacggcgtgttgctggttattgtcaaagagctgaaggccatcatgaagagggacctc
aaccgcaaaatggtggaggtggtggctttccgagcgttcgacgagtggtgggagaagaag
gaacactcggcaaaggcgtctttgactcctctgaagggctctgagggcaaagaagaggat
cgacccaaacctaaagagacactaggctcaagcctgctggagaactggaacaagggcgag
gggctcggctacgagggaatgggtctgggaattggactgcggggcgccatccgcctgccc
tctttcaaggtgaaaaggaaagatccacctgaggctgcatctgcgagcgacaacaaacgt
gccaggccgtccacgccggtagacgacgaacttgaggacgaagaacgagatcgagatctg
accgagctccctgcagatgagtccaagatggacgccgacggcctcgccaagcgacggcac
tcccgaccccgcgtgctggacagtgagggagaggaggaggaggacacctcagaaaaggag
gagtctttgtctgacagggaagaaggagagtctgatgaagtgaaggttaaagacagactc
gcgtcaggcaagaaaagtggcgaggaagaggatgatgggaaagacgttggagactcgtct
ggagacagctcgtcctctgattcatccgatgacgaagcgggcagcccggcgtcctccaaa
gccagttccgactccacctcggaaagctccgactcctcctctgaaagctccagctcctca
gagtatgagctgagctcagacgatgaggacgaccaggtgtcagaggagggtcgcaaaggc
ccaaggacaccctcgtcttcttcctcctcctcctcctcgtcttcttcctcggaagacgaa
ggggaggcaggcgtcagaccgccgagccctcccacaggaccccttgtggaggtgaaagag
gagcatgaggagagggaagaagttagcagcaaacacaagaggagacctccaagtcctgag
gaggtgtcagccaaagacctgaagccaacgctgcctaaagtcaaagaggaggacatccag
acggacggcggcgcagctgtggggaagtctgaacctgcagaacacgcagcaaaccttcgc
ccacctactcccacagggacgctgccagatagcgaccaggagacgaaagctaaagaagtt
cgctccctcctccacccaccctctgttccaatccccgaattcgcccagcgggcccggctc
cccacagaggaggacatcccccgcacgcctggcagggacttgatggaacgggctcggggt
ctgggcaaatcccagagcaccgacacggttcccatcacacccggcagcgacgcccccctg
acgggcagcagcctgttgctcagctcccctcacatccccggtagccccttctcctacccc
gcccagtccccggtcctcagtgcagggctccctcgaaccccagggagagacctaaccttc
acccccgtcttccccgaccccgcagtgctaacgcttaacaggaaaatatcctccgaaagt
ctggatgataaacccgtgttcaaagagccccccctcaactcccttccccatcagactcag
tcggccggctccgagctctccacaagtgtcccagaagatctgtcctctgatctctccgta
gatgttcccgagccctctgacagcacgccgtcaaagaaaaagatcggccgacctaaaggc
aaaaagggcctggcggcctccccagcccacgagtctttagagctgtcagctgaatcagaa
cctctgcctcctgaagcccatctggaggatccatccattcatgcgatatctgcagagtcc
cccaaacaccgcactttggattttcgggaagaaggctccaagcctcagacggtgctgccg
gcggaggacggcctgctctcctgcgacgaggactcacctgtggtggctaagtcaacaagg
aggtcgcggcggtgctgggaggagctgcttcgagggagcctgtctcccgtcacgacgccc
ccacgctcctactttacccggcgctctgactttgaggagatgacgatcctatacgacatc
tggaacgaaggcatcgacgaagaggacatccggcttctgcagatcacctacgacaagatg
ctccagcaggacaacggcaacgactggctgaacgacacgctgtgggtcaaccaccctcct
accaacatccccgtagtgaagaaaaagaggagggacgacggcatgagggatcacgccacc
ggctgcgcgcgaagcgaggggtactataagatcgacaaaaaggacaagatcaagtacctg
cagagttcacggctgctgtcggaagagccgcccgtcgacacacagggcatgagcatccca
gcgcaggtccaagcctcttccagagctggctcggagcgccgctcagaacagcggcgattg
ctgtcctcttttgcttgtgacagcgacttgttgaagttcaaccagctgaagttccggaag
aagaagatccgattctgcaaatcaaacattcacgactggggtctgttcgccatggagccc
atagctgcagacgaaatggtgatcgagtacgtgggtcagaacatcagacaggtgatagcc
gacatgagggagaagcgttacgaggaggagggcatcgggagcagctacatgttccgggtg
gaccacgacaccatcatcgatgcgacgaaatgcggaaactttgcccgtttcatcaaccac
agctgcaaccccaactgttatgcaaaggtcatcaccgtggaatcccagaagaagatcgtg
atctactctcggcagccgatcaacgtcaacgaggagatcacctacgactacaagttcccc
atcgaggacgagaagatcccctgtctgtgtggggcggagaactgtaggggaacgctcaac
tga
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integrated database retrieval system
