KEGG   Oryzias latipes (Japanese medaka): 101164626
Entry
101164626         CDS       T02443                                 
Symbol
rbm20
Name
(RefSeq) RNA-binding protein 20
  KO
K24052  RNA-binding protein 20
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ola03041]
    101164626 (rbm20)
Spliceosome [BR:ola03041]
 Complex A
  Other components
   Complex A specific factors
    101164626 (rbm20)
SSDB
Motif
Pfam: zf-C2H2_jaz zf-met zf-U1 RRM_5 FANCI_S1-cap
Other DBs
NCBI-GeneID: 101164626
NCBI-ProteinID: XP_023811326
LinkDB
Position
1:36722156..36785258
AA seq 1048 aa
MLGKGQSGGYPPEMSETLQSLPVPPLEAAEKKGLQLGVSLAAPLQAAPQPQNQQLLFSPA
SLQLAQLQAQLTLQRLKLAHGGSAAAASSVLNQLLSNANMFNQLQTPSIVGNPPGAFPTA
VMGFPSSNAAVRPSVSVGLNQSSANVRLNPISGEYGKPPGSVFSCDSDRRFQFGSAAASS
AASVSAGDQQFSGITTQAQNTGIHRDFFGQDVPAGFPAKEQNSAARKEQWKGPNNTLAGQ
VDMVSNPPAMWIPPGQPTQSRTELYDPEEPTAEPKLNCRAGISAFGSSCTAGFGGFPPLH
GSEETLSSGVRTLQPYQVNDYYDVTPTQLPHQCSICDKKVYNLKDWDQHVKGKLHLQNRT
FYTTDCSAAAAAAAASAGHYAGSRPPEGALNPGGNTAVPCSAAGQGFQLVIPGPRSTSLT
ANHHALASKLFAPSQASAGRVVHICNLPEGSCTENDVINLGLPFGKVTNYILMRSTHQAF
LEMAYDEAAQAMVQYYQLTPAMINNQKLLIRMSKRYKELQLKKPGKDVLTVIKDITSQRE
REEMQELEHFMLERPRSRSPINHSPPSHSPSFASCGSAHSPPAALCRGPERNGLGPHRSS
WVWPSHVRRSEEERDREDPWRNGGSVDDDLPNGRAAARRNTYQKHSDFGDGMRDNRERPP
RGSPQGFSSYRSLEDHFYSEQMYKSEKCLRPSYPRHDMKTKRRDGGDYHVRYRHPDFNLA
EEPPCRPAEGSPGRRSKRSSRRQESAEKHEKETENNESGSKEKSISPQENTKTKEEDGDA
KKHQESGEDTDEECWFPTNMEELVTVDEVGGEDDSIIEPDLPEVEGFASCPKETGVEASV
EKPPAPPSLEPQEILTQKPEQENSGEETGVQTEACVSNKEGDEATASSPEEQKAEPEGSG
PPVTHFPREDLKAAVEEMCLDDHTEPPTEPQEDTMENPVCSPEDSQNQEEQAAELIHNKD
PSTEESPQKEMEVPASSAAQDKAVSEHSIPLGVEFIVPSSGFYCKLCELFYTSESAAKTT
HCRSTVHYKNLQKYLSQLAEDSLSSVLN
NT seq 3147 nt   +upstreamnt  +downstreamnt
atgctgggaaaaggtcaaagtggaggatacccccctgagatgagtgagacccttcagagc
ctccctgtgccgccgttggaggcggcagagaagaagggcctccagctgggcgtctccctg
gcggcccctctgcaggcggcccctcagccgcagaaccagcagctcctcttctctccggcc
agcctccaactcgctcagcttcaggctcagctgacgctgcagcggctcaaactggcccac
ggaggcagcgccgccgctgcttccagtgttttaaatcagttactatccaatgccaacatg
ttcaaccagctacagactccgtctatcgttggcaacccaccgggggcttttcccaccgcc
gtgatgggctttccctcttcaaatgcagccgtgaggccttcggtcagtgtaggactgaac
caaagctctgcgaacgtgagactgaaccccatctctggagagtacgggaaaccaccaggc
tctgttttctcctgtgactccgacagacgttttcagttcggttcagccgcagcctcgtct
gcagcctcggtcagtgcaggagaccagcagttctctgggatcaccactcaggctcagaac
accggcattcatcgagatttctttggacaagacgttccagccgggtttcctgccaaagag
cagaactctgctgctcgtaaggagcagtggaaagggcccaacaacactctagctggacag
gtggacatggtttctaatcctcctgccatgtggatcccacccggacagcccactcagtcc
agaacagaactgtatgacccagaggagccaaccgctgaacccaagttaaactgccgtgct
gggatttctgcttttggctcaagctgcaccgcagggtttgggggcttcccgcccctgcat
ggaagcgaggaaaccctgtcttcaggcgttcggacacttcagccctaccaagtgaatgat
tattatgacgtaacacccactcagctgccccaccagtgcagcatctgtgacaaaaaggtc
tacaatctcaaggactgggaccagcacgtgaaggggaagttacacctgcagaaccgaacc
ttctacacaaccgactgctctgccgccgccgccgccgccgccgcatcagccggtcactac
gctggcagcaggccccctgagggagctctgaaccctggaggaaacaccgccgtcccctgc
tctgctgcaggtcaaggttttcagttggttattcctggtcccaggagcaccagtctgacc
gccaaccatcacgcgttagccagcaagctgtttgcacccagccaggcctcggcgggccgc
gtcgttcacatctgcaatcttcctgagggaagctgtacagagaatgatgtcatcaacctg
ggcctgcccttcggcaaagtcaccaactacattctgatgagatccacacatcaggcgttt
ctggagatggcttatgatgaagcagctcaagcaatggttcaatactaccagctgactcca
gccatgatcaacaaccagaagctcctcatacggatgtccaaacggtacaaggagctccag
cttaagaaaccaggtaaagatgttctgacggtcatcaaggacatcacctcacaaagagaa
agggaggagatgcaggaactagagcacttcatgctggagaggccgcgctctcgcagcccc
atcaaccacagtcccccctcccacagccccagctttgcatcatgcggctctgctcacagc
cccccagcagcactgtgcaggggtccggagaggaatgggctcggcccccaccggagctct
tgggtttggccgtcccacgtgaggaggagcgaggaggagagggatcgggaggatccctgg
agaaacggaggcagcgtggatgacgatctaccgaacggacgagctgccgcccggcggaac
acctaccagaaacactcagactttggagacggaatgagggacaacagagagcggcccccc
cggggcagcccgcagggctttagctcctacaggagcctggaggatcatttctactctgag
caaatgtacaagtcagagaagtgtctcaggccttcatacccccggcatgacatgaagaca
aagaggagggacggaggcgattaccacgtccgctacagacatccggactttaacttggct
gaggagccaccatgcagacctgcagaaggttcaccagggaggaggagtaagaggtccagc
aggaggcaggaatctgcagagaagcacgagaaagaaacagaaaacaatgagtccgggtca
aaagaaaaatccatttcaccacaagagaacactaaaacaaaagaggaagatggagacgct
aagaaacaccaggaaagtggcgaagacaccgatgaagagtgctggtttccaaccaacatg
gaagagctggtcactgtggacgaagtaggcggagaagatgactccatcattgagccggac
ctccctgaggtggagggttttgcatcctgccccaaagagaccggagtggaggcgtcagtg
gagaagcctccagcaccgccttccttagagccgcaggagattctgacccaaaaaccggag
caggaaaactccggtgaggaaacaggagtccaaacagaagcctgtgtgagtaacaaagaa
ggtgatgaagcaaccgcatccagccctgaagaacagaaagcagagccagaaggttctggg
ccgccggtcacacacttccccagggaggacctcaaggctgcagtggaggagatgtgctta
gacgaccatacagagccgcccactgagccgcaagaggacaccatggaaaaccccgtctgc
tcaccagaggacagccaaaaccaagaagaacaggccgcagaactaatccataacaaagat
ccatcaacagaagaaagtcctcaaaaagaaatggaggtccctgcttcctctgcagcccag
gacaaagctgtcagcgagcacagcattcctctgggagtggagtttatcgtgccgagttct
ggcttctactgcaaactctgtgaactgttctacaccagcgagagcgcggccaagaccacg
cactgtcgcagcaccgtgcactacaagaacctgcagaaatacttgtcccagctggcagag
gacagtctgtcgagcgtcctgaactag

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