Oryzias latipes (Japanese medaka): 101166025
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Entry
101166025 CDS
T02443
Symbol
hdac2
Name
(RefSeq) histone deacetylase 2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03082
ATP-dependent chromatin remodeling
ola03083
Polycomb repressive complex
ola04110
Cell cycle
ola04330
Notch signaling pathway
ola04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101166025 (hdac2)
03083 Polycomb repressive complex
101166025 (hdac2)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
101166025 (hdac2)
04350 TGF-beta signaling pathway
101166025 (hdac2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101166025 (hdac2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ola03036
]
101166025 (hdac2)
Enzymes [BR:
ola01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
101166025 (hdac2)
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
101166025 (hdac2)
HDAC complexes
Sin3A-HDAC complex
101166025 (hdac2)
BRAF-HDAC complex
101166025 (hdac2)
REST complex
101166025 (hdac2)
SHIP complex
101166025 (hdac2)
MiDAC complex
101166025 (hdac2)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
101166025 (hdac2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
101166025 (hdac2)
Chromatin remodeling factors
NuRD complex
101166025 (hdac2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
101166025
NCBI-ProteinID:
XP_004083964
UniProt:
H2MUR3
LinkDB
All DBs
Position
24:21615442..21623214
Genome browser
AA seq
489 aa
AA seq
DB search
MAYTVAGGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHK
ATADEMTKYHSDDYIKFLRSIRPDNMSEFSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSA
AGAVKLNRQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIH
HGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYE
QIFKPVMSKVMEMYQPSAVVLQCGSDSLSGDRLGCFNLTIRGHAKCVEYIKSFNLPLLML
GGGGYTIRNVARCWTYETAVALDTEIPDELPYNDYFEYFGPDFKLHISPSNMTNQNTQEY
LDKIKQRLFENLRMLPHAPGVQMQAIPEDAVPDDPLDEDKEDPDKRLSIRATDKRIVCEE
EFSDSEDEGEGGRRNVASHKKGGKRPRLEEEKKEGEEKKADVKEEEKTKDSNSEKTDSKS
VKTEQSSSA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacacggttgcaggtggaactaagaagaaggtctgctactactacgacggtgat
gttggaaactactattatggacaaggacaccccatgaagccacatcggatccgcatgact
cacaacctcctcctgaactatggcctctacagaaaaatggagatctataggccacacaaa
gccaccgcagacgagatgaccaaataccacagtgacgactacatcaagttcctcagatcc
atacggccagacaacatgtccgagttcagcaagcagatgcagcgcttcaacgttggggag
gactgtcctgtgttcgatggcctgtttgagttctgtcagctgtcagccggcggttctgct
gctggggctgtgaagctgaacaggcagcagacggacattgccgtgaactgggcgggggga
ctccaccacgccaagaagtctgaggcttcgggcttctgctacgtgaacgacattgtgttg
gccatcctggagctcctcaagtaccaccagagggtgctttacatcgacattgacatccac
catggagatggagtggaggaggccttctacaccactgacagggtcatgacggtgtctttc
cataaatacggagagtacttccctggaactggagacctcagggatattggagctggaaaa
ggcaaatactacgctgtaaactttcccctgcgggatgggattgatgacgagtcatacgag
caaatcttcaaacccgtgatgtcaaaggtgatggagatgtaccagcccagtgctgtggtt
ctgcagtgcggttcagactccctgtcaggagaccgcctcggatgcttcaacctcaccatc
cgcggtcatgccaaatgcgtggagtacatcaagtccttcaacctcccgttgctcatgctg
gggggaggaggatataccattcgcaatgtggcgcgctgctggacttacgagactgctgtg
gctctggacacggaaatcccagacgaactgccttacaacgactactttgagtactttgga
cccgacttcaagctgcacatcagcccctccaacatgaccaaccagaacacacaggagtac
ctggataagatcaagcagcgcctgttcgagaacctgcggatgcttcctcacgctccagga
gttcagatgcaggccatcccagaggacgccgtcccagacgatccgctggacgaggacaag
gaggatcccgacaaacgcctgtctattcgggccacggataagaggatagtctgcgaggag
gagttctccgattcagaggacgaaggggagggaggccggaggaacgtggccagccacaag
aagggaggcaagcggccccgcctggaggaggaaaagaaggagggagaggagaagaaagct
gatgtaaaggaagaggagaagacgaaggacagcaactcagagaaaacggattccaaaagt
gtgaagacggagcagagcagcagcgcctga
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