KEGG   Oryzias latipes (Japanese medaka): 101166025
Entry
101166025         CDS       T02443                                 
Symbol
hdac2
Name
(RefSeq) histone deacetylase 2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03082  ATP-dependent chromatin remodeling
ola03083  Polycomb repressive complex
ola04110  Cell cycle
ola04330  Notch signaling pathway
ola04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    101166025 (hdac2)
   03083 Polycomb repressive complex
    101166025 (hdac2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    101166025 (hdac2)
   04350 TGF-beta signaling pathway
    101166025 (hdac2)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    101166025 (hdac2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ola03036]
    101166025 (hdac2)
Enzymes [BR:ola01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     101166025 (hdac2)
Chromosome and associated proteins [BR:ola03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     101166025 (hdac2)
   HDAC complexes
    Sin3A-HDAC complex
     101166025 (hdac2)
    BRAF-HDAC complex
     101166025 (hdac2)
    REST complex
     101166025 (hdac2)
    SHIP complex
     101166025 (hdac2)
    MiDAC complex
     101166025 (hdac2)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     101166025 (hdac2)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    101166025 (hdac2)
  Chromatin remodeling factors
   NuRD complex
    101166025 (hdac2)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 101166025
NCBI-ProteinID: XP_004083964
UniProt: H2MUR3
LinkDB
Position
24:21615442..21623214
AA seq 489 aa
MAYTVAGGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHK
ATADEMTKYHSDDYIKFLRSIRPDNMSEFSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSA
AGAVKLNRQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIH
HGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYE
QIFKPVMSKVMEMYQPSAVVLQCGSDSLSGDRLGCFNLTIRGHAKCVEYIKSFNLPLLML
GGGGYTIRNVARCWTYETAVALDTEIPDELPYNDYFEYFGPDFKLHISPSNMTNQNTQEY
LDKIKQRLFENLRMLPHAPGVQMQAIPEDAVPDDPLDEDKEDPDKRLSIRATDKRIVCEE
EFSDSEDEGEGGRRNVASHKKGGKRPRLEEEKKEGEEKKADVKEEEKTKDSNSEKTDSKS
VKTEQSSSA
NT seq 1470 nt   +upstreamnt  +downstreamnt
atggcgtacacggttgcaggtggaactaagaagaaggtctgctactactacgacggtgat
gttggaaactactattatggacaaggacaccccatgaagccacatcggatccgcatgact
cacaacctcctcctgaactatggcctctacagaaaaatggagatctataggccacacaaa
gccaccgcagacgagatgaccaaataccacagtgacgactacatcaagttcctcagatcc
atacggccagacaacatgtccgagttcagcaagcagatgcagcgcttcaacgttggggag
gactgtcctgtgttcgatggcctgtttgagttctgtcagctgtcagccggcggttctgct
gctggggctgtgaagctgaacaggcagcagacggacattgccgtgaactgggcgggggga
ctccaccacgccaagaagtctgaggcttcgggcttctgctacgtgaacgacattgtgttg
gccatcctggagctcctcaagtaccaccagagggtgctttacatcgacattgacatccac
catggagatggagtggaggaggccttctacaccactgacagggtcatgacggtgtctttc
cataaatacggagagtacttccctggaactggagacctcagggatattggagctggaaaa
ggcaaatactacgctgtaaactttcccctgcgggatgggattgatgacgagtcatacgag
caaatcttcaaacccgtgatgtcaaaggtgatggagatgtaccagcccagtgctgtggtt
ctgcagtgcggttcagactccctgtcaggagaccgcctcggatgcttcaacctcaccatc
cgcggtcatgccaaatgcgtggagtacatcaagtccttcaacctcccgttgctcatgctg
gggggaggaggatataccattcgcaatgtggcgcgctgctggacttacgagactgctgtg
gctctggacacggaaatcccagacgaactgccttacaacgactactttgagtactttgga
cccgacttcaagctgcacatcagcccctccaacatgaccaaccagaacacacaggagtac
ctggataagatcaagcagcgcctgttcgagaacctgcggatgcttcctcacgctccagga
gttcagatgcaggccatcccagaggacgccgtcccagacgatccgctggacgaggacaag
gaggatcccgacaaacgcctgtctattcgggccacggataagaggatagtctgcgaggag
gagttctccgattcagaggacgaaggggagggaggccggaggaacgtggccagccacaag
aagggaggcaagcggccccgcctggaggaggaaaagaaggagggagaggagaagaaagct
gatgtaaaggaagaggagaagacgaaggacagcaactcagagaaaacggattccaaaagt
gtgaagacggagcagagcagcagcgcctga

DBGET integrated database retrieval system