Oryzias latipes (Japanese medaka): 101166213
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Entry
101166213 CDS
T02443
Symbol
prrx1
Name
(RefSeq) paired mesoderm homeobox protein 1 isoform X2
KO
K09329
paired mesoderm homeobox protein
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101166213 (prrx1)
Transcription factors [BR:
ola03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
101166213 (prrx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
101166213
NCBI-ProteinID:
XP_004068189
UniProt:
A0A3P9IK55
H2ME55
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Position
4:complement(23334201..23355659)
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AA seq
246 aa
AA seq
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MTSSYAHVMDRQVTITNRLESPITSNNLDNLQAKKNFSVSHLLDLEEAGEMVGTQADESV
GEAGRSMLESPGLTSGSDTTQQENEQMNTEEKKKRKQRRNRTTFNSSQLQALERVFERTH
YPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLASKNASLLKSYSGEVTAVEQ
PIVPRPAPRQNDYLSWGSAAPYSAMATYPPTCSNTNTAQGMNMANSIANLRLKAKEYSLN
QVPTVN
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgacttctagctatgcgcatgtaatggacaggcaagtcacaataacgaaccgcctggaa
agccccatcacgtcgaataacctggacaacctgcaggctaagaagaacttctcggtcagc
cacctgttggacctggaggaggctggagagatggtcggcacgcaggctgacgagagcgtc
ggggaggccggcaggagtatgctggagtcgccaggactgaccagcgggagcgacaccacc
cagcaggagaatgagcagatgaacacagaggagaagaagaagaggaagcagcgcaggaac
cgcaccaccttcaacagcagccagctccaggccctggaaagggtgtttgaaaggacgcac
taccccgatgcgtttgtcagggaggacctggcccgtcgggtcaacctcacggaagccaga
gtccaggtttggttccagaaccgaagagccaagttccgcagaaacgagagagccatgctg
gccagcaaaaatgcctccctcctcaagtcttactcaggagaagtgacggcagtggagcag
cccatcgtgccgcgccctgcacctcgccagaacgattacctatcctggggcagtgctgcc
ccttacagtgccatggccacctacccgcctacctgctccaacaccaacacagcccagggg
atgaacatggccaacagcatcgccaacctgcggctcaaagccaaggagtacagcttgaac
caggtgcccacggtcaactga
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