Oryzias latipes (Japanese medaka): 101168045
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Entry
101168045 CDS
T02443
Symbol
hdac5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
101168045 (hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ola03036
]
101168045 (hdac5)
Enzymes [BR:
ola01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
101168045 (hdac5)
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
101168045 (hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
101168045
NCBI-ProteinID:
XP_023813582
LinkDB
All DBs
Position
8:23870139..23910152
Genome browser
AA seq
1117 aa
AA seq
DB search
MLQTIYETDSCFSSADGRQQPLQLLSGKQGSSAAMPIAVAEVKSGLQSGMQSPAAASSEQ
RGGATEGGGGLAESSGTEGGPVDLRNEPRVGSLSGGVAVDTTLREQQLQQELVLLKQQQE
LQKQLLFAEFQKKHEVLTRQHEVQLQEHLKQQQELLAAKRQQELEQKRKLEQQRHEEQEK
QRLEQQLLLLRNKEKGRESAIASTEVKLKLQEFLLSKKEPGPSGLNHSFSPKCWAAQHPS
LDQGSPPQGSTPGTPPSYKLPSLLGSYEGKDDFPLRKTVSEPNLKVRSRLKQKVAERRSS
PLLRRKDGTVISTFKKRAIEISVSSMCSSAPGSGPSSPNSSNTAISNGSTGSVPNIQTEL
RSLHQMLGADGTLSLYTSPSLPNISLGLPANTHIPPTQKLSAQQEAERQAIQSLRGGGAL
TGKFLSTSSLPAGGGHEVEAPPPTSHSTHSSLLQHVLLLEQARQQSAMLVPVYNQSPLVT
AERGVASGLRSVNKLPRHRPLARTQSAPLPQSPQALQQLVVQQQHQHFLEKHYKMLSKGA
DLPRPPPTHPEETEEELTESSDMQEDEGEASVSSLQREGSHDRKHASEQLFVHVKGEEEH
SSGQVRDESTESELEEEEEDDEVVPLREGEDEERGSFIQPLQPLGVFQSSLAHKYLGRSK
SSPTASINPVKHLFTTGLVYDSLMLKHQCVCGNAHIHPEHAGRVQSIWSRLQETGLLGRC
ERIRGRKASLDEIQSVHSEFHTLLYGTSPLNRHKLDHKKLLGPISQKMYAVLPCGGIGVD
SDTVWNEMHSSAAVRMAVGSVIELAFKVAAGELKNGFAVVRPPGHHAEESTAMGFCFFNS
VAIAAKLLQQKLGVGKILIVDWDIHHGNGTQQAFYTDPSVLYISLHRYDDGNFFPGSGAP
EEVGSGAGVGFNVNIAWTGGVEPPMGDVEYLVAFRSVVMPIAQRFSPDVVLVSAGFDAVE
GHQSPLGGYNVSAKCFGQLTQLLMGLAGGRVVMALEGGHDLTAICDASEACVSALLGDLC
DSTFQWPLDNPCPKACASLERVIEIQSKHWSCLQPLSQTSGRSQPDGGQGTQSEKDEAET
VSAMASLSVDVEQPVSVPESTDSSRSTEEPMEEEPIL
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgttgcagaccatctatgagacggattcttgcttttcctctgcagacggccgccagcag
cctctgcagctcctgagtggcaaacagggctccagcgcagccatgcccatcgctgtggca
gaggtgaagagtggcctccagtcaggcatgcaaagcccagcagcagcaagcagtgagcag
agaggaggagctacagaaggaggaggcgggcttgcagaaagctctggaacagaaggaggc
ccagtagacctaaggaacgagcctagggtggggtctctgtctgggggagtggcagtggac
acaaccctacgagagcagcagcttcagcaggagctggtgctcctcaaacagcagcaggag
ctgcagaaacagttgctgttcgctgagtttcagaagaagcacgaggttctgacgcggcag
cacgaggtccagctgcaggagcacctgaagcaacaacaggagctgctggcggccaagcgc
caacaggagctggagcagaaacggaagctggagcagcagaggcatgaggagcaggagaag
cagaggctggagcagcagctgctgctgctcaggaacaaggagaaaggcagagagagtgcc
atcgccagcacggaggtgaagctgaagctgcaggagttcctactcagtaagaaggagcct
ggacccagcggactgaaccattccttctccccaaagtgctgggctgctcagcacccctcc
ctggaccagggctctcctcctcagggtagcactcctggcactcccccctcctacaaacta
ccctcgctgttgggaagctacgaaggcaaagatgacttccctctacgcaagacagtctca
gaacccaacctgaaggtgcggtcccgactgaagcagaaggtggctgagaggcgcagctcc
ccccttctgcgtagaaaggacggcactgtcatcagcaccttcaagaaaagggccatcgag
atttcagtctcctccatgtgcagcagcgctccgggttcaggtcccagcagtcccaacagc
tccaacacggccatatcaaacggcagcacggggtcggtccccaacatccagactgagctc
cggtcgcttcatcagatgctgggtgccgacgggacgctgagcctgtacacgtctccctct
ctgcccaacatctccctgggtctgcccgccaacacgcacatcccgcctacacagaagctg
tctgcccagcaggaggccgagcgccaagccatccaatctctgcgagggggcggagctttg
acagggaagtttctgtcgacgtcctccctgcctgcaggcggtggccatgaggttgaggct
cctcctcccacctctcactccacccactcttcgcttctgcaacacgtgttgctgttggag
caggccagacaacaaagcgcaatgctcgtgcccgtgtacaatcaatcgccgctggtcact
gctgagaggggcgtggcctctggtctccgttccgtcaataagctgcctcgccaccggccg
ctggctcgcacacagagtgctcctttgccccaatccccccaggccctgcagcagctggtg
gtccagcagcagcaccagcacttcctggagaaacattacaagatgctgtcaaaaggggca
gacctcccccggcccccgcccactcacccagaggagacggaggaggagctgacagagagc
agtgacatgcaggaggacgaaggggaggcgagcgtgagcagcctccagagggaggggtcc
catgaccgcaaacacgcctccgaacagctctttgtgcacgtgaagggggaggaggagcac
tcaagtggccaggtcagagatgagagcacagagagtgagctggaagaagaggaggaggac
gatgaggtcgtcccgctgagagaaggcgaggatgaggagagagggagcttcatccagccc
ctgcagccgctgggcgtcttccagtcctcgttggcccacaaatatctgggacggtccaag
tcgtctcccacagcgtccatcaatcctgtcaagcacctcttcacaactggtctggtctac
gacagtctgatgttgaagcaccagtgtgtgtgtggaaatgcccacatccatccggagcat
gcaggccgggtccagagcatctggtccagactgcaggagacgggcctactgggccgctgt
gagaggatacgtggacggaaggcatctctggatgagatccagtctgttcattcggagttt
cacacgctgctgtacggaaccagcccactcaatcggcacaaactggaccacaagaagctt
ctgggtcccatcagtcagaagatgtacgccgtccttccctgtggaggcatcggggtggac
agtgacaccgtgtggaatgagatgcactcctcagcagcggtccgcatggctgtgggctcc
gtcatcgagcttgccttcaaagtggcagcaggagagctgaagaatggttttgcagttgta
cgtccgccgggccaccacgctgaggagtccacagccatggggttctgcttcttcaactcc
gtggccattgctgctaaactgctgcagcagaagctgggcgtggggaagatcctgatcgtg
gactgggacattcaccatggaaacggcacccagcaggccttttacacggatcccagcgtg
ctctacatctcgctgcatcgctatgacgatggaaacttcttccccggcagcggagcccct
gaggaggtggggtccggagcaggtgtgggctttaacgtgaacatagcgtggaccggaggc
gtggagccccccatgggggatgtggagtacctcgttgctttcaggagtgtggtgatgccc
atcgctcagcggttcagtcctgatgtggttctggtgtctgcgggctttgatgcagtggag
ggccatcagtctcctctggggggctacaacgtctctgccaaatgtttcggacagctcacc
cagctgctgatgggtctggcgggtgggcgggtggtcatggctctggaggggggccacgac
ctgactgccatctgtgacgcgtcggaggcctgcgtgtctgcactgctgggagacctgtgt
gactccacctttcagtggccgctggacaatccctgtcctaaagcttgtgcctccttggag
cgggtcatcgagatccagagtaaacactggtcctgtcttcagcctttgtcccagaccagc
gggcgctcgcagcctgacggaggtcaggggacgcagtcggagaaggacgaggcggaaacg
gtcagtgccatggcgtcgctgagcgtggacgtggagcagcctgtttctgttcctgagagc
acggacagcagcaggtccacagaggagcccatggaggaggagcctatcttgtag
DBGET
integrated database retrieval system
